RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 TMEM225Q6GV28 225 aa6.84□□□□□ -1.31
MSH6-211ENST00000606499 SMARCD3Q6STE5 483 aa6.84□□□□□ -1.31
MSH6-211ENST00000606499 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.84□□□□□ -1.31
MSH6-211ENST00000606499 ATCAYQ86WG3 371 aa6.84□□□□□ -1.31
MSH6-211ENST00000606499 WDFY1Q8IWB7 410 aa6.84□□□□□ -1.31
MSH6-211ENST00000606499 MCEMP1Q8IX19 187 aa6.84□□□□□ -1.31
MSH6-211ENST00000606499 NAXEQ8NCW5 288 aa6.84□□□□□ -1.31
MSH6-211ENST00000606499 OR9K2Q8NGE7 335 aa6.84□□□□□ -1.31
MSH6-211ENST00000606499 OR8D4Q8NGM9 314 aa6.84□□□□□ -1.31
MSH6-211ENST00000606499 MBD3L2Q8NHZ7 208 aaPredicted RBP6.84□□□□□ -1.31
MSH6-211ENST00000606499 WNT2BQ93097 391 aa6.84□□□□□ -1.31
MSH6-211ENST00000606499 EME1Q96AY2 570 aa6.84□□□□□ -1.31
MSH6-211ENST00000606499 SAMD8Q96LT4 415 aa6.84□□□□□ -1.31
MSH6-211ENST00000606499 DMRTA2Q96SC8 542 aa6.84□□□□□ -1.31
MSH6-211ENST00000606499 TM9SF2Q99805 663 aa6.84□□□□□ -1.31
MSH6-211ENST00000606499 SLC29A1Q99808 456 aa6.84□□□□□ -1.31
MSH6-211ENST00000606499 C9orf16Q9BUW7 83 aa6.84□□□□□ -1.31
MSH6-211ENST00000606499 PLA2G12AQ9BZM1 189 aa6.84□□□□□ -1.31
MSH6-211ENST00000606499 UCK2Q9BZX2 261 aa6.84□□□□□ -1.31
MSH6-211ENST00000606499 OR52D1Q9H346 318 aa6.84□□□□□ -1.31
MSH6-211ENST00000606499 CALHM2Q9HA72 323 aa6.84□□□□□ -1.31
MSH6-211ENST00000606499 ZNF556Q9HAH1 456 aa6.84□□□□□ -1.31
MSH6-211ENST00000606499 PAPOLBQ9NRJ5 636 aaKnown RBP6.84□□□□□ -1.31
MSH6-211ENST00000606499 KRT84Q9NSB2 600 aa6.84□□□□□ -1.31
MSH6-211ENST00000606499 KLHL9Q9P2J3 617 aa6.84□□□□□ -1.31
MSH6-211ENST00000606499 REV1Q9UBZ9 1251 aa6.84□□□□□ -1.31
MSH6-211ENST00000606499 RASD1Q9Y272 281 aa6.84□□□□□ -1.31
MSH6-211ENST00000606499 B3GALT5Q9Y2C3 310 aa6.84□□□□□ -1.31
MSH6-211ENST00000606499 MEMO1Q9Y316 297 aa6.84□□□□□ -1.31
MSH6-211ENST00000606499 BOLA1Q9Y3E2 137 aa6.84□□□□□ -1.31
MSH6-211ENST00000606499 ADAM18Q9Y3Q7 739 aa6.84□□□□□ -1.31
MSH6-211ENST00000606499 CDH10Q9Y6N8 788 aa6.84□□□□□ -1.31
MSH6-211ENST00000606499 ZGRF1Q86YA3 2104 aa6.83□□□□□ -1.32
MSH6-211ENST00000606499 MED12LQ86YW9 2145 aa6.83□□□□□ -1.32
MSH6-211ENST00000606499 IGKV3D-15A0A087WSY6 115 aa6.83□□□□□ -1.32
MSH6-211ENST00000606499 E9PLN8 166 aa6.83□□□□□ -1.32
MSH6-211ENST00000606499 H3BN98 237 aa6.83□□□□□ -1.32
MSH6-211ENST00000606499 CASQ2O14958 399 aaPredicted RBP6.83□□□□□ -1.32
MSH6-211ENST00000606499 LRRTM2O43300 516 aa6.83□□□□□ -1.32
MSH6-211ENST00000606499 SS18L1O75177 396 aaPredicted RBP6.83□□□□□ -1.32
MSH6-211ENST00000606499 PTP4A3O75365 173 aa6.83□□□□□ -1.32
MSH6-211ENST00000606499 NDUFB2O95178 105 aa6.83□□□□□ -1.32
MSH6-211ENST00000606499 PPP1R3DO95685 299 aa6.83□□□□□ -1.32
MSH6-211ENST00000606499 ALPLP05186 524 aa6.83□□□□□ -1.32
MSH6-211ENST00000606499 HOXD4P09016 255 aaPredicted RBP6.83□□□□□ -1.32
MSH6-211ENST00000606499 TMIGD3P0DMS9 266 aaPredicted RBP6.83□□□□□ -1.32
MSH6-211ENST00000606499 GSTM3P21266 225 aa6.83□□□□□ -1.32
MSH6-211ENST00000606499 EDNRAP25101 427 aa6.83□□□□□ -1.32
MSH6-211ENST00000606499 RPL4P36578 427 aaKnown RBP6.83□□□□□ -1.32
MSH6-211ENST00000606499 SLC16A1P53985 500 aa6.83□□□□□ -1.32
MSH6-211ENST00000606499 PER3P56645 1201 aa6.83□□□□□ -1.32
MSH6-211ENST00000606499 ZP4Q12836 540 aa6.83□□□□□ -1.32
MSH6-211ENST00000606499 FOXF2Q12947 444 aa6.83□□□□□ -1.32
MSH6-211ENST00000606499 TOP3AQ13472 1001 aaPredicted RBP6.83□□□□□ -1.32
MSH6-211ENST00000606499 MELKQ14680 651 aa6.83□□□□□ -1.32
MSH6-211ENST00000606499 RNPS1Q15287 305 aaKnown RBP6.83□□□□□ -1.32
MSH6-211ENST00000606499 POU4F3Q15319 338 aa6.83□□□□□ -1.32
MSH6-211ENST00000606499 GUSBP1Q15486 140 aa6.83□□□□□ -1.32
MSH6-211ENST00000606499 SLC36A3Q495N2 470 aa6.83□□□□□ -1.32
MSH6-211ENST00000606499 CLEC12AQ5QGZ9 265 aa6.83□□□□□ -1.32
MSH6-211ENST00000606499 OGFRL1Q5TC84 451 aaPredicted RBP6.83□□□□□ -1.32
MSH6-211ENST00000606499 KDM4DQ6B0I6 523 aa6.83□□□□□ -1.32
MSH6-211ENST00000606499 OR2A2Q6IF42 318 aa6.83□□□□□ -1.32
MSH6-211ENST00000606499 CD300LDQ6UXZ3 194 aa6.83□□□□□ -1.32
MSH6-211ENST00000606499 ZBTB49Q6ZSB9 765 aa6.83□□□□□ -1.32
MSH6-211ENST00000606499 RASSF6Q6ZTQ3 369 aa6.83□□□□□ -1.32
MSH6-211ENST00000606499 CREB3L2Q70SY1 520 aa6.83□□□□□ -1.32
MSH6-211ENST00000606499 FJX1Q86VR8 437 aa6.83□□□□□ -1.32
MSH6-211ENST00000606499 UEVLDQ8IX04 471 aa6.83□□□□□ -1.32
MSH6-211ENST00000606499 TUSC5Q8IXB3 177 aa6.83□□□□□ -1.32
MSH6-211ENST00000606499 SLC43A2Q8N370 569 aa6.83□□□□□ -1.32
MSH6-211ENST00000606499 CNEP1R1Q8N9A8 125 aa6.83□□□□□ -1.32
MSH6-211ENST00000606499 ZIC4Q8N9L1 334 aa6.83□□□□□ -1.32
MSH6-211ENST00000606499 LRRC75AQ8NAA5 344 aa6.83□□□□□ -1.32
MSH6-211ENST00000606499 MAGEE2Q8TD90 523 aaPredicted RBP6.83□□□□□ -1.32
MSH6-211ENST00000606499 NRG4Q8WWG1 115 aa6.83□□□□□ -1.32
MSH6-211ENST00000606499 INTS12Q96CB8 462 aaKnown RBP6.83□□□□□ -1.32
MSH6-211ENST00000606499 GMPPAQ96IJ6 420 aaPredicted RBP6.83□□□□□ -1.32
MSH6-211ENST00000606499 OXGR1Q96P68 337 aa6.83□□□□□ -1.32
MSH6-211ENST00000606499 ZNF385AQ96PM9 386 aaKnown RBP6.83□□□□□ -1.32
MSH6-211ENST00000606499 TSPAN32Q96QS1 320 aa6.83□□□□□ -1.32
MSH6-211ENST00000606499 RBM4BQ9BQ04 359 aaKnown RBP6.83□□□□□ -1.32
MSH6-211ENST00000606499 VKORC1Q9BQB6 163 aa6.83□□□□□ -1.32
MSH6-211ENST00000606499 KATNB1Q9BVA0 655 aa6.83□□□□□ -1.32
MSH6-211ENST00000606499 RBM4Q9BWF3 364 aaKnown RBP6.83□□□□□ -1.32
MSH6-211ENST00000606499 OSBPL10Q9BXB5 764 aa6.83□□□□□ -1.32
MSH6-211ENST00000606499 C12orf49Q9H741 205 aa6.83□□□□□ -1.32
MSH6-211ENST00000606499 FANCFQ9NPI8 374 aa6.83□□□□□ -1.32
MSH6-211ENST00000606499 INIPQ9NRY2 104 aa6.83□□□□□ -1.32
MSH6-211ENST00000606499 TBC1D23Q9NUY8 699 aa6.83□□□□□ -1.32
MSH6-211ENST00000606499 MED29Q9NX70 200 aa6.83□□□□□ -1.32
MSH6-211ENST00000606499 POFUT2Q9Y2G5 429 aa6.83□□□□□ -1.32
MSH6-211ENST00000606499 NOX1Q9Y5S8 564 aa6.83□□□□□ -1.32
MSH6-211ENST00000606499 FLVCR1Q9Y5Y0 555 aa6.83□□□□□ -1.32
MSH6-211ENST00000606499 USP9XQ93008 2570 aaPredicted RBP6.83□□□□□ -1.32
MSH6-211ENST00000606499 DCHS2Q6V1P9 2916 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 HRNRQ86YZ3 2850 aaPredicted RBP6.82□□□□□ -1.32
MSH6-211ENST00000606499 A0A0G2JNJ9 132 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 LOC102725191A0A1B0GVB3 256 aa6.82□□□□□ -1.32
MSH6-211ENST00000606499 A0A1W2PRG6 482 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms