RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 PXKQ7Z7A4 578 aa16.9■□□□□ 0.3
SRSF4-206ENST00000605204 P3H2Q8IVL5 708 aa16.9■□□□□ 0.3
SRSF4-206ENST00000605204 PIK3C3Q8NEB9 887 aa16.9■□□□□ 0.3
SRSF4-206ENST00000605204 OR5J2Q8NH18 312 aa16.9■□□□□ 0.3
SRSF4-206ENST00000605204 GEMIN6Q8WXD5 167 aaKnown RBP16.9■□□□□ 0.3
SRSF4-206ENST00000605204 TPD52L3Q96J77 140 aa16.9■□□□□ 0.3
SRSF4-206ENST00000605204 HS6ST2Q96MM7 605 aa16.9■□□□□ 0.3
SRSF4-206ENST00000605204 LIME1Q9H400 295 aa16.9■□□□□ 0.3
SRSF4-206ENST00000605204 NANSQ9NR45 359 aa16.9■□□□□ 0.3
SRSF4-206ENST00000605204 ZNF229Q9UJW7 825 aa16.9■□□□□ 0.3
SRSF4-206ENST00000605204 FLNAP21333 2647 aaKnown RBP16.9■□□□□ 0.3
SRSF4-206ENST00000605204 NIPBLQ6KC79 2804 aaeCLIP16.9■□□□□ 0.31e-6■□□□□ 10.1
SRSF4-206ENST00000605204 TRAF3IP2O43734 574 aaPredicted RBP16.89■□□□□ 0.3
SRSF4-206ENST00000605204 GMNNO75496 209 aa16.89■□□□□ 0.3
SRSF4-206ENST00000605204 IFNW1P05000 195 aa16.89■□□□□ 0.3
SRSF4-206ENST00000605204 SELENOPP49908 381 aa16.89■□□□□ 0.3
SRSF4-206ENST00000605204 CLDN17P56750 224 aa16.89■□□□□ 0.3
SRSF4-206ENST00000605204 SPATS1Q496A3 300 aa16.89■□□□□ 0.3
SRSF4-206ENST00000605204 SEZ6L2Q6UXD5 910 aa16.89■□□□□ 0.3
SRSF4-206ENST00000605204 TMEM108Q6UXF1 575 aa16.89■□□□□ 0.3
SRSF4-206ENST00000605204 PRRC1Q96M27 445 aa16.89■□□□□ 0.3
SRSF4-206ENST00000605204 MOGAT1Q96PD6 335 aa16.89■□□□□ 0.3
SRSF4-206ENST00000605204 UBTD1Q9HAC8 227 aa16.89■□□□□ 0.3
SRSF4-206ENST00000605204 TAGLN3Q9UI15 199 aa16.89■□□□□ 0.3
SRSF4-206ENST00000605204 RIMS3Q9UJD0 308 aa16.89■□□□□ 0.3
SRSF4-206ENST00000605204 RPS6KA6Q9UK32 745 aa16.89■□□□□ 0.3
SRSF4-206ENST00000605204 MGAT4BQ9UQ53 548 aa16.89■□□□□ 0.3
SRSF4-206ENST00000605204 MPDZO75970 2070 aa16.89■□□□□ 0.29
SRSF4-206ENST00000605204 ZNF432O94892 652 aa16.89■□□□□ 0.29
SRSF4-206ENST00000605204 OR6A2O95222 327 aa16.89■□□□□ 0.29
SRSF4-206ENST00000605204 FAM107AO95990 144 aa16.89■□□□□ 0.29
SRSF4-206ENST00000605204 THY1P04216 161 aa16.89■□□□□ 0.29
SRSF4-206ENST00000605204 HIST1H2ABP04908 130 aa16.89■□□□□ 0.29
SRSF4-206ENST00000605204 CD53P19397 219 aa16.89■□□□□ 0.29
SRSF4-206ENST00000605204 PTAFRP25105 342 aa16.89■□□□□ 0.29
SRSF4-206ENST00000605204 ST3GAL3Q11203 375 aa16.89■□□□□ 0.29
SRSF4-206ENST00000605204 ALKBH2Q6NS38 261 aa16.89■□□□□ 0.29
SRSF4-206ENST00000605204 HMBOX1Q6NT76 420 aa16.89■□□□□ 0.29
SRSF4-206ENST00000605204 WDR88Q6ZMY6 472 aa16.89■□□□□ 0.29
SRSF4-206ENST00000605204 CBLL1Q75N03 491 aa16.89■□□□□ 0.29
SRSF4-206ENST00000605204 HIST3H2AQ7L7L0 130 aa16.89■□□□□ 0.29
SRSF4-206ENST00000605204 PGAM4Q8N0Y7 254 aa16.89■□□□□ 0.29
SRSF4-206ENST00000605204 HIST1H2ACQ93077 130 aa16.89■□□□□ 0.29
SRSF4-206ENST00000605204 TMUB1Q9BVT8 246 aa16.89■□□□□ 0.29
SRSF4-206ENST00000605204 SEC14L4Q9UDX3 406 aa16.89■□□□□ 0.29
SRSF4-206ENST00000605204 SLC25A15Q9Y619 301 aa16.89■□□□□ 0.29
SRSF4-206ENST00000605204 RPL36A-HNRNPH2H7BZ11 118 aa16.88■□□□□ 0.29
SRSF4-206ENST00000605204 PLPP3O14495 311 aa16.88■□□□□ 0.29
SRSF4-206ENST00000605204 HS3ST1O14792 307 aa16.88■□□□□ 0.29
SRSF4-206ENST00000605204 WNT11O96014 354 aa16.88■□□□□ 0.29
SRSF4-206ENST00000605204 MT-ND1P03886 318 aa16.88■□□□□ 0.29
SRSF4-206ENST00000605204 HOXB1P14653 301 aaPredicted RBP16.88■□□□□ 0.29
SRSF4-206ENST00000605204 OR1E2P47887 323 aa16.88■□□□□ 0.29
SRSF4-206ENST00000605204 PRPS1P60891 318 aa16.88■□□□□ 0.29
SRSF4-206ENST00000605204 POU3F1Q03052 451 aaPredicted RBP16.88■□□□□ 0.29
SRSF4-206ENST00000605204 LTBQ06643 244 aa16.88■□□□□ 0.29
SRSF4-206ENST00000605204 ZP4Q12836 540 aa16.88■□□□□ 0.29
SRSF4-206ENST00000605204 IFI44LQ53G44 452 aa16.88■□□□□ 0.29
SRSF4-206ENST00000605204 TSPYL5Q86VY4 417 aaPredicted RBP16.88■□□□□ 0.29
SRSF4-206ENST00000605204 KDM8Q8N371 416 aa16.88■□□□□ 0.29
SRSF4-206ENST00000605204 GPR137CQ8N3F9 429 aa16.88■□□□□ 0.29
SRSF4-206ENST00000605204 ZNF611Q8N823 705 aa16.88■□□□□ 0.29
SRSF4-206ENST00000605204 MAGEE2Q8TD90 523 aaPredicted RBP16.88■□□□□ 0.29
SRSF4-206ENST00000605204 FAM162AQ96A26 154 aa16.88■□□□□ 0.29
SRSF4-206ENST00000605204 LRR1Q96L50 414 aa16.88■□□□□ 0.29
SRSF4-206ENST00000605204 ALKBH3Q96Q83 286 aaPredicted RBP16.88■□□□□ 0.29
SRSF4-206ENST00000605204 CCT8L2Q96SF2 557 aa16.88■□□□□ 0.29
SRSF4-206ENST00000605204 PRSS27Q9BQR3 290 aa16.88■□□□□ 0.29
SRSF4-206ENST00000605204 SLC17A5Q9NRA2 495 aa16.88■□□□□ 0.29
SRSF4-206ENST00000605204 ADA2Q9NZK5 511 aa16.88■□□□□ 0.29
SRSF4-206ENST00000605204 ABCA4P78363 2273 aa16.87■□□□□ 0.29
SRSF4-206ENST00000605204 MS4A18H0YCH9 400 aa16.87■□□□□ 0.29
SRSF4-206ENST00000605204 ZNF682O95780 498 aa16.87■□□□□ 0.29
SRSF4-206ENST00000605204 CH25HO95992 272 aa16.87■□□□□ 0.29
SRSF4-206ENST00000605204 TNFRSF1BP20333 461 aa16.87■□□□□ 0.29
SRSF4-206ENST00000605204 CBLP22681 906 aa16.87■□□□□ 0.29
SRSF4-206ENST00000605204 BSPH1Q075Z2 132 aa16.87■□□□□ 0.29
SRSF4-206ENST00000605204 PIN1Q13526 163 aaPredicted RBP16.87■□□□□ 0.29
SRSF4-206ENST00000605204 KRT72Q14CN4 511 aa16.87■□□□□ 0.29
SRSF4-206ENST00000605204 MS4A18Q3C1V0 323 aa16.87■□□□□ 0.29
SRSF4-206ENST00000605204 SAMD4BQ5PRF9 694 aaKnown RBP16.87■□□□□ 0.29
SRSF4-206ENST00000605204 C16orf89Q6UX73 402 aa16.87■□□□□ 0.29
SRSF4-206ENST00000605204 OFCC1Q8IZS5 231 aa16.87■□□□□ 0.29
SRSF4-206ENST00000605204 OR52N5Q8NH56 324 aa16.87■□□□□ 0.29
SRSF4-206ENST00000605204 TMEM239Q8WW34 195 aa16.87■□□□□ 0.29
SRSF4-206ENST00000605204 ADAD1Q96M93 576 aaKnown RBP16.87■□□□□ 0.29
SRSF4-206ENST00000605204 OR2M2Q96R28 347 aa16.87■□□□□ 0.29
SRSF4-206ENST00000605204 CCL19Q99731 98 aa16.87■□□□□ 0.29
SRSF4-206ENST00000605204 B3GAT2Q9NPZ5 323 aa16.87■□□□□ 0.29
SRSF4-206ENST00000605204 SAMD4AQ9UPU9 718 aaKnown RBP16.87■□□□□ 0.29
SRSF4-206ENST00000605204 MED31Q9Y3C7 131 aa16.87■□□□□ 0.29
SRSF4-206ENST00000605204 SERPINA1P01009 418 aa16.86■□□□□ 0.29
SRSF4-206ENST00000605204 ASAH2BP0C7U1 165 aa16.86■□□□□ 0.29
SRSF4-206ENST00000605204 ADORA3P0DMS8 318 aa16.86■□□□□ 0.29
SRSF4-206ENST00000605204 HOXB4P17483 251 aaPredicted RBP16.86■□□□□ 0.29
SRSF4-206ENST00000605204 AHCYP23526 432 aa16.86■□□□□ 0.29
SRSF4-206ENST00000605204 ROR2Q01974 943 aaKnown RBP16.86■□□□□ 0.29
SRSF4-206ENST00000605204 ANKRD16Q6P6B7 361 aa16.86■□□□□ 0.29
SRSF4-206ENST00000605204 FKBP9P1Q75LS8 142 aa16.86■□□□□ 0.29
SRSF4-206ENST00000605204 HDDC2Q7Z4H3 204 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms