RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 PRG2P13727 222 aa14.39□□□□□ -0.11
USE1-208ENST00000600970 CREB1P16220 341 aa14.39□□□□□ -0.11
USE1-208ENST00000600970 ANXA11P50995 505 aaKnown RBP14.39□□□□□ -0.11
USE1-208ENST00000600970 COPZ1P61923 177 aa14.39□□□□□ -0.11
USE1-208ENST00000600970 TXNL4AP83876 142 aaKnown RBP14.39□□□□□ -0.11
USE1-208ENST00000600970 MAD2L1BPQ15013 274 aaPredicted RBP14.39□□□□□ -0.11
USE1-208ENST00000600970 MAPK11Q15759 364 aa14.39□□□□□ -0.11
USE1-208ENST00000600970 DPY19L1Q2PZI1 675 aa14.39□□□□□ -0.11
USE1-208ENST00000600970 LRP11Q86VZ4 500 aa14.39□□□□□ -0.11
USE1-208ENST00000600970 RIBC1Q8N443 379 aaPredicted RBP14.39□□□□□ -0.11
USE1-208ENST00000600970 OR52P1PQ8NH57 321 aa14.39□□□□□ -0.11
USE1-208ENST00000600970 ZNF75AQ96N20 296 aa14.39□□□□□ -0.11
USE1-208ENST00000600970 OXGR1Q96P68 337 aa14.39□□□□□ -0.11
USE1-208ENST00000600970 PTDSS2Q9BVG9 487 aa14.39□□□□□ -0.11
USE1-208ENST00000600970 MYEF2Q9P2K5 600 aaKnown RBP14.39□□□□□ -0.11
USE1-208ENST00000600970 B3GAT1Q9P2W7 334 aa14.39□□□□□ -0.11
USE1-208ENST00000600970 BTNL2Q9UIR0 455 aa14.39□□□□□ -0.11
USE1-208ENST00000600970 A0A096LPI6 279 aa14.38□□□□□ -0.11
USE1-208ENST00000600970 TLDC2A0PJX2 215 aa14.38□□□□□ -0.11
USE1-208ENST00000600970 E9PBE3 544 aa14.38□□□□□ -0.11
USE1-208ENST00000600970 PPIHO43447 177 aaKnown RBP14.38□□□□□ -0.11
USE1-208ENST00000600970 HLA-HP01893 362 aa14.38□□□□□ -0.11
USE1-208ENST00000600970 GSNP06396 782 aa14.38□□□□□ -0.11
USE1-208ENST00000600970 BPGMP07738 259 aa14.38□□□□□ -0.11
USE1-208ENST00000600970 S100A3P33764 101 aa14.38□□□□□ -0.11
USE1-208ENST00000600970 GLRXP35754 106 aa14.38□□□□□ -0.11
USE1-208ENST00000600970 CDKN2CP42773 168 aa14.38□□□□□ -0.11
USE1-208ENST00000600970 RPS5P46782 204 aaKnown RBP14.38□□□□□ -0.11
USE1-208ENST00000600970 MYBPC1Q00872 1141 aa14.38□□□□□ -0.11
USE1-208ENST00000600970 EGR4Q05215 589 aa14.38□□□□□ -0.11
USE1-208ENST00000600970 LIN52Q52LA3 116 aa14.38□□□□□ -0.11
USE1-208ENST00000600970 PHYHD1Q5SRE7 291 aa14.38□□□□□ -0.11
USE1-208ENST00000600970 ATG16L1Q676U5 607 aa14.38□□□□□ -0.11
USE1-208ENST00000600970 REP15Q6BDI9 236 aa14.38□□□□□ -0.11
USE1-208ENST00000600970 CLIP4Q8N3C7 705 aa14.38□□□□□ -0.11
USE1-208ENST00000600970 TEX29Q8N6K0 151 aa14.38□□□□□ -0.11
USE1-208ENST00000600970 KIF18AQ8NI77 898 aa14.38□□□□□ -0.11
USE1-208ENST00000600970 PNPT1Q8TCS8 783 aaKnown RBP14.38□□□□□ -0.11
USE1-208ENST00000600970 OR2M2Q96R28 347 aa14.38□□□□□ -0.11
USE1-208ENST00000600970 SUCNR1Q9BXA5 334 aa14.38□□□□□ -0.11
USE1-208ENST00000600970 ESM1Q9NQ30 184 aa14.38□□□□□ -0.11
USE1-208ENST00000600970 PCDHGB1Q9Y5G3 927 aa14.38□□□□□ -0.11
USE1-208ENST00000600970 DSPPQ9NZW4 1301 aa14.38□□□□□ -0.11
USE1-208ENST00000600970 TMPRSS2O15393 492 aa14.37□□□□□ -0.11
USE1-208ENST00000600970 ITM2AO43736 263 aa14.37□□□□□ -0.11
USE1-208ENST00000600970 RP2O75695 350 aa14.37□□□□□ -0.11
USE1-208ENST00000600970 NCR1O76036 304 aa14.37□□□□□ -0.11
USE1-208ENST00000600970 CD79AP11912 226 aa14.37□□□□□ -0.11
USE1-208ENST00000600970 ZNF14P17017 642 aaPredicted RBP14.37□□□□□ -0.11
USE1-208ENST00000600970 NCF2P19878 526 aaPredicted RBP14.37□□□□□ -0.11
USE1-208ENST00000600970 GTF2E2P29084 291 aaKnown RBP14.37□□□□□ -0.11
USE1-208ENST00000600970 CLNS1AP54105 237 aaKnown RBP14.37□□□□□ -0.11
USE1-208ENST00000600970 MRPS11P82912 194 aaKnown RBP14.37□□□□□ -0.11
USE1-208ENST00000600970 GSG1Q2KHT4 349 aa14.37□□□□□ -0.11
USE1-208ENST00000600970 TRMT5Q32P41 509 aaKnown RBP14.37□□□□□ -0.11
USE1-208ENST00000600970 ZNF311Q5JNZ3 666 aa14.37□□□□□ -0.11
USE1-208ENST00000600970 TMEM123Q8N131 208 aa14.37□□□□□ -0.11
USE1-208ENST00000600970 TRIML2Q8N7C3 387 aa14.37□□□□□ -0.11
USE1-208ENST00000600970 ZNF781Q8N8C0 355 aa14.37□□□□□ -0.11
USE1-208ENST00000600970 ZDHHC22Q8N966 263 aa14.37□□□□□ -0.11
USE1-208ENST00000600970 PIK3C3Q8NEB9 887 aa14.37□□□□□ -0.11
USE1-208ENST00000600970 KTI12Q96EK9 354 aaPredicted RBP14.37□□□□□ -0.11
USE1-208ENST00000600970 PANX1Q96RD7 426 aa14.37□□□□□ -0.11
USE1-208ENST00000600970 ZNF416Q9BWM5 594 aa14.37□□□□□ -0.11
USE1-208ENST00000600970 TMPRSS13Q9BYE2 586 aa14.37□□□□□ -0.11
USE1-208ENST00000600970 ZNF696Q9H7X3 374 aa14.37□□□□□ -0.11
USE1-208ENST00000600970 FZR1Q9UM11 496 aa14.37□□□□□ -0.11
USE1-208ENST00000600970 ZNF443Q9Y2A4 671 aaPredicted RBP14.37□□□□□ -0.11
USE1-208ENST00000600970 CHST2Q9Y4C5 530 aa14.37□□□□□ -0.11
USE1-208ENST00000600970 NOX1Q9Y5S8 564 aa14.37□□□□□ -0.11
USE1-208ENST00000600970 M0R3G1 203 aa14.36□□□□□ -0.11
USE1-208ENST00000600970 FZD7O75084 574 aa14.36□□□□□ -0.11
USE1-208ENST00000600970 NAT2P11245 290 aa14.36□□□□□ -0.11
USE1-208ENST00000600970 ANPEPP15144 967 aa14.36□□□□□ -0.11
USE1-208ENST00000600970 PIGFQ07326 219 aa14.36□□□□□ -0.11
USE1-208ENST00000600970 C1DQ13901 141 aaKnown RBP14.36□□□□□ -0.11
USE1-208ENST00000600970 CHI3L2Q15782 390 aa14.36□□□□□ -0.11
USE1-208ENST00000600970 FXNQ16595 210 aa14.36□□□□□ -0.11
USE1-208ENST00000600970 PDLIM3Q53GG5 364 aaPredicted RBP14.36□□□□□ -0.11
USE1-208ENST00000600970 RNF220Q5VTB9 566 aa14.36□□□□□ -0.11
USE1-208ENST00000600970 ACSM5Q6NUN0 579 aa14.36□□□□□ -0.11
USE1-208ENST00000600970 ZNF621Q6ZSS3 439 aa14.36□□□□□ -0.11
USE1-208ENST00000600970 C1QL2Q7Z5L3 287 aa14.36□□□□□ -0.11
USE1-208ENST00000600970 SERPINA11Q86U17 422 aa14.36□□□□□ -0.11
USE1-208ENST00000600970 LRRC34Q8IZ02 419 aa14.36□□□□□ -0.11
USE1-208ENST00000600970 TEX37Q96LM6 180 aa14.36□□□□□ -0.11
USE1-208ENST00000600970 SLC6A7Q99884 636 aa14.36□□□□□ -0.11
USE1-208ENST00000600970 ZNF747Q9BV97 191 aa14.36□□□□□ -0.11
USE1-208ENST00000600970 ZNF665Q9H7R5 613 aa14.36□□□□□ -0.11
USE1-208ENST00000600970 SLC52A3Q9NQ40 469 aa14.36□□□□□ -0.11
USE1-208ENST00000600970 MPZL1O95297 269 aa14.35□□□□□ -0.11
USE1-208ENST00000600970 GKAP1Q5VSY0 366 aaPredicted RBP14.35□□□□□ -0.11
USE1-208ENST00000600970 ZNF385DQ9H6B1 395 aa14.35□□□□□ -0.11
USE1-208ENST00000600970 P2RX2Q9UBL9 471 aa14.35□□□□□ -0.11
USE1-208ENST00000600970 DUSP13Q9UII6 198 aa14.35□□□□□ -0.11
USE1-208ENST00000600970 M0R082 166 aa14.34□□□□□ -0.11
USE1-208ENST00000600970 AIM2O14862 343 aa14.34□□□□□ -0.11
USE1-208ENST00000600970 PLPP2O43688 288 aa14.34□□□□□ -0.11
USE1-208ENST00000600970 TRAF3IP2O43734 574 aaPredicted RBP14.34□□□□□ -0.11
USE1-208ENST00000600970 AKAP8O43823 692 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms