RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 RASD2Q96D21 266 aa20.45■□□□□ 0.86
IRF3-227ENST00000600911 GPX7Q96SL4 187 aaPredicted RBP20.45■□□□□ 0.86
IRF3-227ENST00000600911 PITX2Q99697 317 aa20.45■□□□□ 0.86
IRF3-227ENST00000600911 IFT27Q9BW83 186 aa20.45■□□□□ 0.86
IRF3-227ENST00000600911 SLC25A19Q9HC21 320 aa20.45■□□□□ 0.86
IRF3-227ENST00000600911 NRIP3Q9NQ35 241 aa20.45■□□□□ 0.86
IRF3-227ENST00000600911 MED29Q9NX70 200 aa20.45■□□□□ 0.86
IRF3-227ENST00000600911 NDRG4Q9ULP0 352 aaKnown RBP20.45■□□□□ 0.86
IRF3-227ENST00000600911 PCDHGB5Q9Y5G0 923 aa20.45■□□□□ 0.86
IRF3-227ENST00000600911 IER3IP1Q9Y5U9 82 aa20.45■□□□□ 0.86
IRF3-227ENST00000600911 OR14I1A6ND48 311 aa20.44■□□□□ 0.86
IRF3-227ENST00000600911 SLC16A6O15403 523 aa20.44■□□□□ 0.86
IRF3-227ENST00000600911 RPL4P36578 427 aaKnown RBP20.44■□□□□ 0.86
IRF3-227ENST00000600911 TOP3AQ13472 1001 aaPredicted RBP20.44■□□□□ 0.86
IRF3-227ENST00000600911 PGGHGQ32M88 737 aa20.44■□□□□ 0.86
IRF3-227ENST00000600911 SLC35F1Q5T1Q4 408 aa20.44■□□□□ 0.86
IRF3-227ENST00000600911 SLX4IPQ5VYV7 408 aa20.44■□□□□ 0.86
IRF3-227ENST00000600911 C12orf73Q69YU5 71 aa20.44■□□□□ 0.86
IRF3-227ENST00000600911 RTL6Q6ICC9 239 aa20.44■□□□□ 0.86
IRF3-227ENST00000600911 FCRLAQ7L513 359 aa20.44■□□□□ 0.86
IRF3-227ENST00000600911 CD163Q86VB7 1156 aa20.44■□□□□ 0.86
IRF3-227ENST00000600911 HRASLS5Q96KN8 279 aa20.44■□□□□ 0.86
IRF3-227ENST00000600911 Q96M85 177 aa20.44■□□□□ 0.86
IRF3-227ENST00000600911 FANCFQ9NPI8 374 aa20.44■□□□□ 0.86
IRF3-227ENST00000600911 CLCF1Q9UBD9 225 aa20.44■□□□□ 0.86
IRF3-227ENST00000600911 ZNF346Q9UL40 294 aaKnown RBP20.44■□□□□ 0.86
IRF3-227ENST00000600911 DNPH1O43598 174 aa20.43■□□□□ 0.86
IRF3-227ENST00000600911 TRAF3IP2O43734 574 aaPredicted RBP20.43■□□□□ 0.86
IRF3-227ENST00000600911 EIF1BO60739 113 aaKnown RBP20.43■□□□□ 0.86
IRF3-227ENST00000600911 PRB1P04280 392 aa20.43■□□□□ 0.86
IRF3-227ENST00000600911 TPOP07202 933 aa20.43■□□□□ 0.86
IRF3-227ENST00000600911 SLC6A6P31641 620 aa20.43■□□□□ 0.86
IRF3-227ENST00000600911 CAPGP40121 348 aa20.43■□□□□ 0.86
IRF3-227ENST00000600911 PRPS1P60891 318 aa20.43■□□□□ 0.86
IRF3-227ENST00000600911 RPS3AP61247 264 aaKnown RBP20.43■□□□□ 0.86
IRF3-227ENST00000600911 POU3F1Q03052 451 aaPredicted RBP20.43■□□□□ 0.86
IRF3-227ENST00000600911 RUNX1T1Q06455 604 aa20.43■□□□□ 0.86
IRF3-227ENST00000600911 SLC17A1Q14916 467 aa20.43■□□□□ 0.86
IRF3-227ENST00000600911 ZNF362Q5T0B9 420 aaPredicted RBP20.43■□□□□ 0.86
IRF3-227ENST00000600911 PDSS1Q5T2R2 415 aa20.43■□□□□ 0.86
IRF3-227ENST00000600911 WLSQ5T9L3 541 aa20.43■□□□□ 0.86
IRF3-227ENST00000600911 ZNF585AQ6P3V2 769 aa20.43■□□□□ 0.86
IRF3-227ENST00000600911 GFRALQ6UXV0 394 aa20.43■□□□□ 0.86
IRF3-227ENST00000600911 C3P1Q6ZMU1 363 aa20.43■□□□□ 0.86
IRF3-227ENST00000600911 ZPLD1Q8TCW7 415 aa20.43■□□□□ 0.86
IRF3-227ENST00000600911 RNF128Q8TEB7 428 aa20.43■□□□□ 0.86
IRF3-227ENST00000600911 ZNF385AQ96PM9 386 aaKnown RBP20.43■□□□□ 0.86
IRF3-227ENST00000600911 INIPQ9NRY2 104 aa20.43■□□□□ 0.86
IRF3-227ENST00000600911 CLEC4AQ9UMR7 237 aa20.43■□□□□ 0.86
IRF3-227ENST00000600911 CYTIPO60759 359 aa20.42■□□□□ 0.86
IRF3-227ENST00000600911 GGT2P36268 569 aa20.42■□□□□ 0.86
IRF3-227ENST00000600911 ACKR1Q16570 336 aa20.42■□□□□ 0.86
IRF3-227ENST00000600911 TMEM225Q6GV28 225 aa20.42■□□□□ 0.86
IRF3-227ENST00000600911 SEM1Q6ZVN7 128 aa20.42■□□□□ 0.86
IRF3-227ENST00000600911 USP51Q70EK9 711 aa20.42■□□□□ 0.86
IRF3-227ENST00000600911 LNX2Q8N448 690 aa20.42■□□□□ 0.86
IRF3-227ENST00000600911 ZIC4Q8N9L1 334 aa20.42■□□□□ 0.86
IRF3-227ENST00000600911 ERMAPQ96PL5 475 aaPredicted RBP20.42■□□□□ 0.86
IRF3-227ENST00000600911 TRIB1Q96RU8 372 aa20.42■□□□□ 0.86
IRF3-227ENST00000600911 EMC6Q9BV81 110 aa20.42■□□□□ 0.86
IRF3-227ENST00000600911 FAM215AQ9Y5M1 114 aa20.42■□□□□ 0.86
IRF3-227ENST00000600911 RELNP78509 3460 aa20.42■□□□□ 0.86
IRF3-227ENST00000600911 BCKDKO14874 412 aa20.42■□□□□ 0.86
IRF3-227ENST00000600911 OR6A2O95222 327 aa20.42■□□□□ 0.86
IRF3-227ENST00000600911 CD14P08571 375 aa20.42■□□□□ 0.86
IRF3-227ENST00000600911 IFNGR1P15260 489 aa20.42■□□□□ 0.86
IRF3-227ENST00000600911 CDH2P19022 906 aaPredicted RBP20.42■□□□□ 0.86
IRF3-227ENST00000600911 EDNRAP25101 427 aa20.42■□□□□ 0.86
IRF3-227ENST00000600911 ANKDD1AQ495B1 522 aa20.42■□□□□ 0.86
IRF3-227ENST00000600911 ACSF3Q4G176 576 aaPredicted RBP20.42■□□□□ 0.86
IRF3-227ENST00000600911 SLC27A4Q6P1M0 643 aa20.42■□□□□ 0.86
IRF3-227ENST00000600911 RPTNQ6XPR3 784 aa20.42■□□□□ 0.86
IRF3-227ENST00000600911 DPY19L2P2Q6ZN68 376 aa20.42■□□□□ 0.86
IRF3-227ENST00000600911 LSM14AQ8ND56 463 aaKnown RBP20.42■□□□□ 0.86
IRF3-227ENST00000600911 OR2T33Q8NG76 320 aa20.42■□□□□ 0.86
IRF3-227ENST00000600911 OR9K2Q8NGE7 335 aa20.42■□□□□ 0.86
IRF3-227ENST00000600911 OR52L1Q8NGH7 329 aa20.42■□□□□ 0.86
IRF3-227ENST00000600911 FAM57AQ8TBR7 257 aa20.42■□□□□ 0.86
IRF3-227ENST00000600911 MUS81Q96NY9 551 aa20.42■□□□□ 0.86
IRF3-227ENST00000600911 OXGR1Q96P68 337 aa20.42■□□□□ 0.86
IRF3-227ENST00000600911 NAA11Q9BSU3 229 aaPredicted RBP20.42■□□□□ 0.86
IRF3-227ENST00000600911 POLDIP3Q9BY77 421 aaKnown RBP20.42■□□□□ 0.86
IRF3-227ENST00000600911 ZNF226Q9NYT6 803 aa20.42■□□□□ 0.86
IRF3-227ENST00000600911 GMPPBQ9Y5P6 360 aa20.42■□□□□ 0.86
IRF3-227ENST00000600911 FREM1Q5H8C1 2179 aa20.41■□□□□ 0.86
IRF3-227ENST00000600911 TEX13CA0A0J9YWL9 993 aa20.41■□□□□ 0.86
IRF3-227ENST00000600911 MESTQ5EB52 335 aa20.41■□□□□ 0.86
IRF3-227ENST00000600911 RPL13AP3Q6NVV1 102 aa20.41■□□□□ 0.86
IRF3-227ENST00000600911 PTCHD4Q6ZW05 846 aa20.41■□□□□ 0.86
IRF3-227ENST00000600911 BCDIN3DQ7Z5W3 292 aaKnown RBP20.41■□□□□ 0.86
IRF3-227ENST00000600911 PXKQ7Z7A4 578 aa20.41■□□□□ 0.86
IRF3-227ENST00000600911 PM20D2Q8IYS1 436 aa20.41■□□□□ 0.86
IRF3-227ENST00000600911 TVP23BQ9NYZ1 205 aa20.41■□□□□ 0.86
IRF3-227ENST00000600911 RASD1Q9Y272 281 aa20.41■□□□□ 0.86
IRF3-227ENST00000600911 ZNF835Q9Y2P0 537 aa20.41■□□□□ 0.86
IRF3-227ENST00000600911 GPR52Q9Y2T5 361 aa20.41■□□□□ 0.86
IRF3-227ENST00000600911 H7C1C5 153 aa20.4■□□□□ 0.86
IRF3-227ENST00000600911 PRKYO43930 277 aa20.4■□□□□ 0.86
IRF3-227ENST00000600911 EDN3P14138 238 aa20.4■□□□□ 0.86
IRF3-227ENST00000600911 HIST1H1CP16403 213 aaKnown RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms