RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 MOKQ9UQ07 419 aa13.79□□□□□ -0.2
VRK3-221ENST00000600284 TLN2Q9Y4G6 2542 aa13.79□□□□□ -0.2
VRK3-221ENST00000600284 HEATR1Q9H583 2144 aaKnown RBP13.78□□□□□ -0.2
VRK3-221ENST00000600284 IGHV1-18A0A0C4DH31 117 aa13.78□□□□□ -0.2
VRK3-221ENST00000600284 ATP6V1G2-DDX39BF2Z307 99 aa13.78□□□□□ -0.2
VRK3-221ENST00000600284 ANGPT2O15123 496 aa13.78□□□□□ -0.2
VRK3-221ENST00000600284 TLX2O43763 284 aaPredicted RBP13.78□□□□□ -0.2
VRK3-221ENST00000600284 EDF1O60869 148 aaKnown RBP13.78□□□□□ -0.2
VRK3-221ENST00000600284 CRYAAP02489 173 aa13.78□□□□□ -0.2
VRK3-221ENST00000600284 LGALS3BPQ08380 585 aa13.78□□□□□ -0.2
VRK3-221ENST00000600284 CLEC2AQ6UVW9 174 aa13.78□□□□□ -0.2
VRK3-221ENST00000600284 PTOV1Q86YD1 416 aa13.78□□□□□ -0.2
VRK3-221ENST00000600284 CCDC36Q8IYA8 594 aa13.78□□□□□ -0.2
VRK3-221ENST00000600284 SCAIQ8N9R8 606 aa13.78□□□□□ -0.2
VRK3-221ENST00000600284 MAPK1IP1LQ8NDC0 245 aa13.78□□□□□ -0.2
VRK3-221ENST00000600284 LRR1Q96L50 414 aa13.78□□□□□ -0.2
VRK3-221ENST00000600284 KCNS3Q9BQ31 491 aa13.78□□□□□ -0.2
VRK3-221ENST00000600284 TMEM43Q9BTV4 400 aa13.78□□□□□ -0.2
VRK3-221ENST00000600284 PRR14Q9BWN1 585 aa13.78□□□□□ -0.2
VRK3-221ENST00000600284 ASPNQ9BXN1 380 aa13.78□□□□□ -0.2
VRK3-221ENST00000600284 SEC14L4Q9UDX3 406 aa13.78□□□□□ -0.2
VRK3-221ENST00000600284 MS4A18H0YCH9 400 aa13.77□□□□□ -0.21
VRK3-221ENST00000600284 CD5LO43866 347 aa13.77□□□□□ -0.21
VRK3-221ENST00000600284 TPST2O60704 377 aa13.77□□□□□ -0.21
VRK3-221ENST00000600284 CRLF1O75462 422 aa13.77□□□□□ -0.21
VRK3-221ENST00000600284 IGKV3-15P01624 115 aa13.77□□□□□ -0.21
VRK3-221ENST00000600284 IGLV1-44P01699 117 aa13.77□□□□□ -0.21
VRK3-221ENST00000600284 BGLAPP02818 100 aa13.77□□□□□ -0.21
VRK3-221ENST00000600284 H2AFXP16104 143 aaPredicted RBP13.77□□□□□ -0.21
VRK3-221ENST00000600284 AQP1P29972 269 aa13.77□□□□□ -0.21
VRK3-221ENST00000600284 EFNA4P52798 201 aa13.77□□□□□ -0.21
VRK3-221ENST00000600284 CYP51A1Q16850 503 aa13.77□□□□□ -0.21
VRK3-221ENST00000600284 SWI5Q1ZZU3 235 aa13.77□□□□□ -0.21
VRK3-221ENST00000600284 MS4A18Q3C1V0 323 aa13.77□□□□□ -0.21
VRK3-221ENST00000600284 ZNF613Q6PF04 617 aa13.77□□□□□ -0.21
VRK3-221ENST00000600284 PRIMA1Q86XR5 153 aa13.77□□□□□ -0.21
VRK3-221ENST00000600284 UEVLDQ8IX04 471 aa13.77□□□□□ -0.21
VRK3-221ENST00000600284 GPR137CQ8N3F9 429 aa13.77□□□□□ -0.21
VRK3-221ENST00000600284 OR2M2Q96R28 347 aa13.77□□□□□ -0.21
VRK3-221ENST00000600284 NELFAQ9H3P2 528 aa13.77□□□□□ -0.21
VRK3-221ENST00000600284 GPR35Q9HC97 309 aa13.77□□□□□ -0.21
VRK3-221ENST00000600284 MRGBPQ9NV56 204 aa13.77□□□□□ -0.21
VRK3-221ENST00000600284 MRPL39Q9NYK5 338 aaKnown RBP13.77□□□□□ -0.21
VRK3-221ENST00000600284 IGHV4-30-2A0A087WSY4 118 aa13.76□□□□□ -0.21
VRK3-221ENST00000600284 M0QX08 132 aa13.76□□□□□ -0.21
VRK3-221ENST00000600284 TRAF3IP2O43734 574 aaPredicted RBP13.76□□□□□ -0.21
VRK3-221ENST00000600284 PDE5AO76074 875 aa13.76□□□□□ -0.21
VRK3-221ENST00000600284 F12P00748 615 aaPredicted RBP13.76□□□□□ -0.21
VRK3-221ENST00000600284 CSF3P09919 207 aa13.76□□□□□ -0.21
VRK3-221ENST00000600284 NQO1P15559 274 aaKnown RBP13.76□□□□□ -0.21
VRK3-221ENST00000600284 CBR1P16152 277 aa13.76□□□□□ -0.21
VRK3-221ENST00000600284 SLC25A16P16260 332 aa13.76□□□□□ -0.21
VRK3-221ENST00000600284 CDH12P55289 794 aa13.76□□□□□ -0.21
VRK3-221ENST00000600284 ARF1P84077 181 aaKnown RBP13.76□□□□□ -0.21
VRK3-221ENST00000600284 IL1RL1Q01638 556 aa13.76□□□□□ -0.21
VRK3-221ENST00000600284 NAAAQ02083 359 aa13.76□□□□□ -0.21
VRK3-221ENST00000600284 DUSP7Q16829 419 aa13.76□□□□□ -0.21
VRK3-221ENST00000600284 MST1LQ2TV78 715 aa13.76□□□□□ -0.21
VRK3-221ENST00000600284 LINC00114Q6XXX2 140 aa13.76□□□□□ -0.21
VRK3-221ENST00000600284 PATL1Q86TB9 770 aaKnown RBP13.76□□□□□ -0.21
VRK3-221ENST00000600284 RETREG3Q86VR2 466 aa13.76□□□□□ -0.21
VRK3-221ENST00000600284 TMEM123Q8N131 208 aa13.76□□□□□ -0.21
VRK3-221ENST00000600284 OR4F15Q8NGB8 312 aa13.76□□□□□ -0.21
VRK3-221ENST00000600284 RNF217Q8TC41 542 aa13.76□□□□□ -0.21
VRK3-221ENST00000600284 THOC1Q96FV9 657 aaKnown RBP13.76□□□□□ -0.21
VRK3-221ENST00000600284 MCHR1Q99705 422 aa13.76□□□□□ -0.21
VRK3-221ENST00000600284 ARHGDIGQ99819 225 aa13.76□□□□□ -0.21
VRK3-221ENST00000600284 WFDC6Q9BQY6 131 aa13.76□□□□□ -0.21
VRK3-221ENST00000600284 KAT8Q9H7Z6 458 aaKnown RBP13.76□□□□□ -0.21
VRK3-221ENST00000600284 CRLF2Q9HC73 371 aa13.76□□□□□ -0.21
VRK3-221ENST00000600284 NPHS2Q9NP85 383 aa13.76□□□□□ -0.21
VRK3-221ENST00000600284 FBXO9Q9UK97 447 aaPredicted RBP13.76□□□□□ -0.21
VRK3-221ENST00000600284 NOX1Q9Y5S8 564 aa13.76□□□□□ -0.21
VRK3-221ENST00000600284 A0A096LNT2 108 aa13.75□□□□□ -0.21
VRK3-221ENST00000600284 A0A096LPE4 126 aa13.75□□□□□ -0.21
VRK3-221ENST00000600284 A0A1W2PPZ6 126 aa13.75□□□□□ -0.21
VRK3-221ENST00000600284 ZNF99A8MXY4 864 aaPredicted RBP13.75□□□□□ -0.21
VRK3-221ENST00000600284 CHP2O43745 196 aa13.75□□□□□ -0.21
VRK3-221ENST00000600284 MT-ATP6P00846 226 aa13.75□□□□□ -0.21
VRK3-221ENST00000600284 ARR3P36575 388 aa13.75□□□□□ -0.21
VRK3-221ENST00000600284 SERPINF1P36955 418 aa13.75□□□□□ -0.21
VRK3-221ENST00000600284 MTPNP58546 118 aa13.75□□□□□ -0.21
VRK3-221ENST00000600284 LOXL1Q08397 574 aaPredicted RBP13.75□□□□□ -0.21
VRK3-221ENST00000600284 PUDPQ08623 228 aa13.75□□□□□ -0.21
VRK3-221ENST00000600284 PMS2P3Q13401 168 aa13.75□□□□□ -0.21
VRK3-221ENST00000600284 NFYCQ13952 458 aa13.75□□□□□ -0.21
VRK3-221ENST00000600284 CEACAM16Q2WEN9 425 aa13.75□□□□□ -0.21
VRK3-221ENST00000600284 INTS11Q5TA45 600 aaKnown RBP13.75□□□□□ -0.21
VRK3-221ENST00000600284 NHLRC1Q6VVB1 395 aa13.75□□□□□ -0.21
VRK3-221ENST00000600284 PXKQ7Z7A4 578 aa13.75□□□□□ -0.21
VRK3-221ENST00000600284 C20orf196Q8IYI0 205 aa13.75□□□□□ -0.21
VRK3-221ENST00000600284 SMYD1Q8NB12 490 aa13.75□□□□□ -0.21
VRK3-221ENST00000600284 IL17RDQ8NFM7 739 aa13.75□□□□□ -0.21
VRK3-221ENST00000600284 RASSF5Q8WWW0 418 aa13.75□□□□□ -0.21
VRK3-221ENST00000600284 FAM168AQ92567 244 aa13.75□□□□□ -0.21
VRK3-221ENST00000600284 CA10Q9NS85 328 aa13.75□□□□□ -0.21
VRK3-221ENST00000600284 ALPK2Q86TB3 2170 aa13.75□□□□□ -0.21
VRK3-221ENST00000600284 A0A0G2JND7 137 aa13.74□□□□□ -0.21
VRK3-221ENST00000600284 VSTM5A8MXK1 200 aa13.74□□□□□ -0.21
VRK3-221ENST00000600284 B9A039 149 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms