RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 ETS2P15036 469 aa16.39■□□□□ 0.21
PNKP-213ENST00000599543 RBBP4Q09028 425 aa16.39■□□□□ 0.21
PNKP-213ENST00000599543 C1orf140Q5VVS0 124 aa16.39■□□□□ 0.21
PNKP-213ENST00000599543 ARMC8Q8IUR7 673 aa16.39■□□□□ 0.21
PNKP-213ENST00000599543 SLC15A3Q8IY34 581 aa16.39■□□□□ 0.21
PNKP-213ENST00000599543 FITM2Q8N6M3 262 aa16.39■□□□□ 0.21
PNKP-213ENST00000599543 ZIC4Q8N9L1 334 aa16.39■□□□□ 0.21
PNKP-213ENST00000599543 HTRA1Q92743 480 aa16.39■□□□□ 0.21
PNKP-213ENST00000599543 C3orf49Q96BT1 292 aa16.39■□□□□ 0.21
PNKP-213ENST00000599543 ZNF607Q96SK3 696 aa16.39■□□□□ 0.21
PNKP-213ENST00000599543 MDFIQ99750 246 aa16.39■□□□□ 0.21
PNKP-213ENST00000599543 SH3GL1Q99961 368 aa16.39■□□□□ 0.21
PNKP-213ENST00000599543 ZNF587BE7ETH6 402 aa16.38■□□□□ 0.21
PNKP-213ENST00000599543 H7C417 338 aa16.38■□□□□ 0.21
PNKP-213ENST00000599543 M0QX08 132 aa16.38■□□□□ 0.21
PNKP-213ENST00000599543 MFN2O95140 757 aa16.38■□□□□ 0.21
PNKP-213ENST00000599543 AHSA1O95433 338 aa16.38■□□□□ 0.21
PNKP-213ENST00000599543 PRDX6P30041 224 aa16.38■□□□□ 0.21
PNKP-213ENST00000599543 PCBP3P57721 371 aaKnown RBP16.38■□□□□ 0.21
PNKP-213ENST00000599543 DSCR9P59020 149 aa16.38■□□□□ 0.21
PNKP-213ENST00000599543 PSME3P61289 254 aa16.38■□□□□ 0.21
PNKP-213ENST00000599543 LIPEQ05469 1076 aa16.38■□□□□ 0.21
PNKP-213ENST00000599543 HIKESHIQ53FT3 197 aa16.38■□□□□ 0.21
PNKP-213ENST00000599543 TAMM41Q96BW9 452 aa16.38■□□□□ 0.21
PNKP-213ENST00000599543 YAE1D1Q9NRH1 226 aa16.38■□□□□ 0.21
PNKP-213ENST00000599543 YLPM1P49750 1951 aaKnown RBP16.37■□□□□ 0.21
PNKP-213ENST00000599543 TMEM229AB2RXF0 380 aa16.37■□□□□ 0.21
PNKP-213ENST00000599543 ATP6V1G2-DDX39BF2Z307 99 aa16.37■□□□□ 0.21
PNKP-213ENST00000599543 M0R3H8 397 aa16.37■□□□□ 0.21
PNKP-213ENST00000599543 NDUFAB1O14561 156 aa16.37■□□□□ 0.21
PNKP-213ENST00000599543 GTF2E2P29084 291 aaKnown RBP16.37■□□□□ 0.21
PNKP-213ENST00000599543 PRKAR1BP31321 381 aa16.37■□□□□ 0.21
PNKP-213ENST00000599543 P2RY4P51582 365 aa16.37■□□□□ 0.21
PNKP-213ENST00000599543 CRYBA2P53672 197 aa16.37■□□□□ 0.21
PNKP-213ENST00000599543 CHRNB3Q05901 458 aa16.37■□□□□ 0.21
PNKP-213ENST00000599543 C8orf82Q6P1X6 216 aaPredicted RBP16.37■□□□□ 0.21
PNKP-213ENST00000599543 DHRS4L2Q6PKH6 230 aa16.37■□□□□ 0.21
PNKP-213ENST00000599543 ZNF525Q8N782 197 aa16.37■□□□□ 0.21
PNKP-213ENST00000599543 RNF148Q8N7C7 305 aa16.37■□□□□ 0.21
PNKP-213ENST00000599543 ANKS4BQ8N8V4 417 aa16.37■□□□□ 0.21
PNKP-213ENST00000599543 GPR32P1Q8NGA4 272 aa16.37■□□□□ 0.21
PNKP-213ENST00000599543 BCAS4Q8TDM0 211 aa16.37■□□□□ 0.21
PNKP-213ENST00000599543 STK35Q8TDR2 534 aa16.37■□□□□ 0.21
PNKP-213ENST00000599543 ALKBH3Q96Q83 286 aaPredicted RBP16.37■□□□□ 0.21
PNKP-213ENST00000599543 SPATA5L1Q9BVQ7 753 aa16.37■□□□□ 0.21
PNKP-213ENST00000599543 OBP2BQ9NPH6 170 aa16.37■□□□□ 0.21
PNKP-213ENST00000599543 TAGLN3Q9UI15 199 aa16.37■□□□□ 0.21
PNKP-213ENST00000599543 RASD1Q9Y272 281 aa16.37■□□□□ 0.21
PNKP-213ENST00000599543 OR6C65A6NJZ3 312 aa16.36■□□□□ 0.21
PNKP-213ENST00000599543 FAM220BPB1ANY3 271 aa16.36■□□□□ 0.21
PNKP-213ENST00000599543 NPIPB7O75200 414 aa16.36■□□□□ 0.21
PNKP-213ENST00000599543 TNFRSF1BP20333 461 aa16.36■□□□□ 0.21
PNKP-213ENST00000599543 APOBEC3AP31941 199 aaPredicted RBP16.36■□□□□ 0.21
PNKP-213ENST00000599543 SELENOPP49908 381 aa16.36■□□□□ 0.21
PNKP-213ENST00000599543 DUSP7Q16829 419 aa16.36■□□□□ 0.21
PNKP-213ENST00000599543 NIPAL3Q6P499 406 aa16.36■□□□□ 0.21
PNKP-213ENST00000599543 CREB3L2Q70SY1 520 aa16.36■□□□□ 0.21
PNKP-213ENST00000599543 MICU2Q8IYU8 434 aa16.36■□□□□ 0.21
PNKP-213ENST00000599543 OR2T12Q8NG77 320 aa16.36■□□□□ 0.21
PNKP-213ENST00000599543 OR10H5Q8NGA6 315 aa16.36■□□□□ 0.21
PNKP-213ENST00000599543 MFSD8Q8NHS3 518 aa16.36■□□□□ 0.21
PNKP-213ENST00000599543 VANGL1Q8TAA9 524 aaPredicted RBP16.36■□□□□ 0.21
PNKP-213ENST00000599543 SLC35B4Q969S0 331 aa16.36■□□□□ 0.21
PNKP-213ENST00000599543 SLC25A36Q96CQ1 311 aa16.36■□□□□ 0.21
PNKP-213ENST00000599543 KCNS3Q9BQ31 491 aa16.36■□□□□ 0.21
PNKP-213ENST00000599543 RPS6KB2Q9UBS0 482 aa16.36■□□□□ 0.21
PNKP-213ENST00000599543 MOKQ9UQ07 419 aa16.36■□□□□ 0.21
PNKP-213ENST00000599543 PMF1-BGLAPU3KQ54 211 aa16.36■□□□□ 0.21
PNKP-213ENST00000599543 FBN1P35555 2871 aaKnown RBP16.36■□□□□ 0.21
PNKP-213ENST00000599543 ELOA3DA6NLF2 546 aaPredicted RBP16.35■□□□□ 0.21
PNKP-213ENST00000599543 SERPINB7O75635 380 aa16.35■□□□□ 0.21
PNKP-213ENST00000599543 LGI1O95970 557 aa16.35■□□□□ 0.21
PNKP-213ENST00000599543 CD247P20963 164 aa16.35■□□□□ 0.21
PNKP-213ENST00000599543 HTR2AP28223 471 aa16.35■□□□□ 0.21
PNKP-213ENST00000599543 RPS5P46782 204 aaKnown RBP16.35■□□□□ 0.21
PNKP-213ENST00000599543 GSK3BP49841 420 aa16.35■□□□□ 0.21
PNKP-213ENST00000599543 UBE2NP61088 152 aaKnown RBP16.35■□□□□ 0.21
PNKP-213ENST00000599543 ELOA3BQ3SY89 546 aa16.35■□□□□ 0.21
PNKP-213ENST00000599543 TBRG1Q3YBR2 411 aa16.35■□□□□ 0.21
PNKP-213ENST00000599543 LRRC23Q53EV4 343 aaPredicted RBP16.35■□□□□ 0.21
PNKP-213ENST00000599543 HACD2Q6Y1H2 254 aa16.35■□□□□ 0.21
PNKP-213ENST00000599543 RBM45Q8IUH3 476 aaKnown RBP16.35■□□□□ 0.21
PNKP-213ENST00000599543 ELOA3Q8NG57 546 aa16.35■□□□□ 0.21
PNKP-213ENST00000599543 OR4D11Q8NGI4 311 aa16.35■□□□□ 0.21
PNKP-213ENST00000599543 OR1K1Q8NGR3 316 aa16.35■□□□□ 0.21
PNKP-213ENST00000599543 SLC26A7Q8TE54 656 aa16.35■□□□□ 0.21
PNKP-213ENST00000599543 FAM168AQ92567 244 aa16.35■□□□□ 0.21
PNKP-213ENST00000599543 BOD1Q96IK1 185 aa16.35■□□□□ 0.21
PNKP-213ENST00000599543 HOPXQ9BPY8 73 aaPredicted RBP16.35■□□□□ 0.21
PNKP-213ENST00000599543 ADA2Q9NZK5 511 aa16.35■□□□□ 0.21
PNKP-213ENST00000599543 SLC13A4Q9UKG4 626 aa16.35■□□□□ 0.21
PNKP-213ENST00000599543 SVEP1Q4LDE5 3571 aa16.35■□□□□ 0.21
PNKP-213ENST00000599543 STAB1Q9NY15 2570 aa16.34■□□□□ 0.21
PNKP-213ENST00000599543 ELOVL7A1L3X0 281 aa16.34■□□□□ 0.21
PNKP-213ENST00000599543 PRORSD1PA6NEY8 169 aa16.34■□□□□ 0.21
PNKP-213ENST00000599543 A8MV72 311 aaPredicted RBP16.34■□□□□ 0.21
PNKP-213ENST00000599543 GPRIN2O60269 458 aa16.34■□□□□ 0.21
PNKP-213ENST00000599543 CSF3P09919 207 aa16.34■□□□□ 0.21
PNKP-213ENST00000599543 PNMTP11086 282 aa16.34■□□□□ 0.21
PNKP-213ENST00000599543 SLC25A16P16260 332 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms