RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 MYPOPQ86VE0 399 aaPredicted RBP18.3■□□□□ 0.52
PNKP-212ENST00000599454 KDM8Q8N371 416 aa18.3■□□□□ 0.52
PNKP-212ENST00000599454 MREGQ8N565 214 aa18.3■□□□□ 0.52
PNKP-212ENST00000599454 RMND5AQ9H871 391 aa18.3■□□□□ 0.52
PNKP-212ENST00000599454 B3GAT1Q9P2W7 334 aa18.3■□□□□ 0.52
PNKP-212ENST00000599454 LOC102725191A0A1B0GVB3 256 aa18.29■□□□□ 0.52
PNKP-212ENST00000599454 HDAC3O15379 428 aa18.29■□□□□ 0.52
PNKP-212ENST00000599454 SLC22A3O75751 556 aa18.29■□□□□ 0.52
PNKP-212ENST00000599454 IFNGR1P15260 489 aa18.29■□□□□ 0.52
PNKP-212ENST00000599454 IL2RGP31785 369 aa18.29■□□□□ 0.52
PNKP-212ENST00000599454 EVX1P49640 407 aa18.29■□□□□ 0.52
PNKP-212ENST00000599454 DVL1P1P54792 670 aaPredicted RBP18.29■□□□□ 0.52
PNKP-212ENST00000599454 NPRL3Q12980 569 aa18.29■□□□□ 0.52
PNKP-212ENST00000599454 SNTB2Q13425 540 aaKnown RBP18.29■□□□□ 0.52
PNKP-212ENST00000599454 DAG1Q14118 895 aa18.29■□□□□ 0.52
PNKP-212ENST00000599454 CEACAM16Q2WEN9 425 aa18.29■□□□□ 0.52
PNKP-212ENST00000599454 ZNF311Q5JNZ3 666 aa18.29■□□□□ 0.52
PNKP-212ENST00000599454 RPS26P11Q5JNZ5 115 aaPredicted RBP18.29■□□□□ 0.52
PNKP-212ENST00000599454 WDR93Q6P2C0 686 aa18.29■□□□□ 0.52
PNKP-212ENST00000599454 MEX3DQ86XN8 651 aaKnown RBP18.29■□□□□ 0.52
PNKP-212ENST00000599454 KTI12Q96EK9 354 aaPredicted RBP18.29■□□□□ 0.52
PNKP-212ENST00000599454 SNX18Q96RF0 628 aa18.29■□□□□ 0.52
PNKP-212ENST00000599454 CRLF2Q9HC73 371 aa18.29■□□□□ 0.52
PNKP-212ENST00000599454 CMAHPQ9Y471 501 aa18.29■□□□□ 0.52
PNKP-212ENST00000599454 ZNF99A8MXY4 864 aaPredicted RBP18.28■□□□□ 0.52
PNKP-212ENST00000599454 EPHA3P29320 983 aa18.28■□□□□ 0.52
PNKP-212ENST00000599454 FAM69AQ5T7M9 428 aa18.28■□□□□ 0.52
PNKP-212ENST00000599454 NET1Q7Z628 596 aaPredicted RBP18.28■□□□□ 0.52
PNKP-212ENST00000599454 MDP1Q86V88 176 aa18.28■□□□□ 0.52
PNKP-212ENST00000599454 CDK20Q8IZL9 346 aa18.28■□□□□ 0.52
PNKP-212ENST00000599454 ZCCHC24Q8N2G6 241 aaKnown RBP18.28■□□□□ 0.52
PNKP-212ENST00000599454 SLC38A4Q969I6 547 aa18.28■□□□□ 0.52
PNKP-212ENST00000599454 ITCHQ96J02 903 aa18.28■□□□□ 0.52
PNKP-212ENST00000599454 WDR55Q9H6Y2 383 aaPredicted RBP18.28■□□□□ 0.52
PNKP-212ENST00000599454 NOX3Q9HBY0 568 aa18.28■□□□□ 0.52
PNKP-212ENST00000599454 BCL2L10Q9HD36 194 aa18.28■□□□□ 0.52
PNKP-212ENST00000599454 RPS6KB2Q9UBS0 482 aa18.28■□□□□ 0.52
PNKP-212ENST00000599454 SH3PXD2BA1X283 911 aa18.27■□□□□ 0.52
PNKP-212ENST00000599454 SLCO1B7G3V0H7 640 aa18.27■□□□□ 0.52
PNKP-212ENST00000599454 NR4A1P22736 598 aa18.27■□□□□ 0.52
PNKP-212ENST00000599454 CAPZA2P47755 286 aa18.27■□□□□ 0.52
PNKP-212ENST00000599454 MPP2Q14168 576 aa18.27■□□□□ 0.52
PNKP-212ENST00000599454 H1FNTQ75WM6 255 aaPredicted RBP18.27■□□□□ 0.52
PNKP-212ENST00000599454 TMEM123Q8N131 208 aa18.27■□□□□ 0.52
PNKP-212ENST00000599454 ADPRHL1Q8NDY3 354 aa18.27■□□□□ 0.52
PNKP-212ENST00000599454 BBS10Q8TAM1 723 aa18.27■□□□□ 0.52
PNKP-212ENST00000599454 TRIM44Q96DX7 344 aaPredicted RBP18.27■□□□□ 0.52
PNKP-212ENST00000599454 OR2M2Q96R28 347 aa18.27■□□□□ 0.52
PNKP-212ENST00000599454 KCNK9Q9NPC2 374 aa18.27■□□□□ 0.52
PNKP-212ENST00000599454 ZIM2Q9NZV7 527 aa18.27■□□□□ 0.52
PNKP-212ENST00000599454 A0A0A6YYJ9 748 aa18.26■□□□□ 0.51
PNKP-212ENST00000599454 ZNF503-AS2A6NEH8 195 aa18.26■□□□□ 0.51
PNKP-212ENST00000599454 B4DSR2 109 aa18.26■□□□□ 0.51
PNKP-212ENST00000599454 M0R082 166 aa18.26■□□□□ 0.51
PNKP-212ENST00000599454 IGFBP1P08833 259 aaPredicted RBP18.26■□□□□ 0.51
PNKP-212ENST00000599454 ADRA2AP08913 450 aa18.26■□□□□ 0.51
PNKP-212ENST00000599454 ITGA2P17301 1181 aa18.26■□□□□ 0.51
PNKP-212ENST00000599454 MFSD13AQ14CX5 517 aa18.26■□□□□ 0.51
PNKP-212ENST00000599454 REP15Q6BDI9 236 aa18.26■□□□□ 0.51
PNKP-212ENST00000599454 LSMEM1Q8N8F7 131 aa18.26■□□□□ 0.51
PNKP-212ENST00000599454 ZNF417Q8TAU3 575 aa18.26■□□□□ 0.51
PNKP-212ENST00000599454 MRPL24Q96A35 216 aaKnown RBP18.26■□□□□ 0.51
PNKP-212ENST00000599454 ZNF837Q96EG3 531 aaPredicted RBP18.26■□□□□ 0.51
PNKP-212ENST00000599454 ZNF587Q96SQ5 575 aaPredicted RBP18.26■□□□□ 0.51
PNKP-212ENST00000599454 PAIP2Q9BPZ3 127 aaKnown RBP18.26■□□□□ 0.51
PNKP-212ENST00000599454 MS4A5Q9H3V2 200 aa18.26■□□□□ 0.51
PNKP-212ENST00000599454 RAD21L1Q9H4I0 556 aa18.26■□□□□ 0.51
PNKP-212ENST00000599454 THAP1Q9NVV9 213 aa18.26■□□□□ 0.51
PNKP-212ENST00000599454 SEC14L4Q9UDX3 406 aa18.26■□□□□ 0.51
PNKP-212ENST00000599454 METRNQ9UJH8 293 aa18.26■□□□□ 0.51
PNKP-212ENST00000599454 SPEF1Q9Y4P9 236 aa18.26■□□□□ 0.51
PNKP-212ENST00000599454 M0R233 179 aa18.25■□□□□ 0.51
PNKP-212ENST00000599454 TRAF3IP2O43734 574 aaPredicted RBP18.25■□□□□ 0.51
PNKP-212ENST00000599454 SYNGR3O43761 229 aa18.25■□□□□ 0.51
PNKP-212ENST00000599454 BMP2P12643 396 aa18.25■□□□□ 0.51
PNKP-212ENST00000599454 GRPRP30550 384 aa18.25■□□□□ 0.51
PNKP-212ENST00000599454 IL1RL1Q01638 556 aa18.25■□□□□ 0.51
PNKP-212ENST00000599454 FADDQ13158 208 aa18.25■□□□□ 0.51
PNKP-212ENST00000599454 TRIP10Q15642 601 aa18.25■□□□□ 0.51
PNKP-212ENST00000599454 SLC9B1Q4ZJI4 515 aa18.25■□□□□ 0.51
PNKP-212ENST00000599454 TNFAIP8L3Q5GJ75 292 aa18.25■□□□□ 0.51
PNKP-212ENST00000599454 HHATQ5VTY9 493 aa18.25■□□□□ 0.51
PNKP-212ENST00000599454 NXNQ6DKJ4 435 aa18.25■□□□□ 0.51
PNKP-212ENST00000599454 KRT80Q6KB66 452 aa18.25■□□□□ 0.51
PNKP-212ENST00000599454 DEF8Q6ZN54 512 aa18.25■□□□□ 0.51
PNKP-212ENST00000599454 ZFAND2BQ8WV99 257 aa18.25■□□□□ 0.51
PNKP-212ENST00000599454 DNAJA4Q8WW22 397 aaPredicted RBP18.25■□□□□ 0.51
PNKP-212ENST00000599454 TAAR8Q969N4 342 aa18.25■□□□□ 0.51
PNKP-212ENST00000599454 MAELQ96JY0 434 aaKnown RBP18.25■□□□□ 0.51
PNKP-212ENST00000599454 LRR1Q96L50 414 aa18.25■□□□□ 0.51
PNKP-212ENST00000599454 DENND2DQ9H6A0 471 aaPredicted RBP18.25■□□□□ 0.51
PNKP-212ENST00000599454 A4GALTQ9NPC4 353 aa18.25■□□□□ 0.51
PNKP-212ENST00000599454 B3GAT2Q9NPZ5 323 aa18.25■□□□□ 0.51
PNKP-212ENST00000599454 SDR39U1Q9NRG7 319 aaPredicted RBP18.25■□□□□ 0.51
PNKP-212ENST00000599454 B3GNT2Q9NY97 397 aa18.25■□□□□ 0.51
PNKP-212ENST00000599454 WNK2Q9Y3S1 2297 aa18.25■□□□□ 0.51
PNKP-212ENST00000599454 TRAV36DV7A0A075B6V5 113 aa18.24■□□□□ 0.51
PNKP-212ENST00000599454 ETS2P15036 469 aa18.24■□□□□ 0.51
PNKP-212ENST00000599454 PRKAR1BP31321 381 aa18.24■□□□□ 0.51
PNKP-212ENST00000599454 HOXC5Q00444 222 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms