RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-205ENST00000597776 CBR1P16152 277 aa9.12□□□□□ -0.95
LSM4-205ENST00000597776 ZNF23P17027 643 aa9.12□□□□□ -0.95
LSM4-205ENST00000597776 HOXB9P17482 250 aaPredicted RBP9.12□□□□□ -0.95
LSM4-205ENST00000597776 GRPRP30550 384 aa9.12□□□□□ -0.95
LSM4-205ENST00000597776 PPOXP50336 477 aa9.12□□□□□ -0.95
LSM4-205ENST00000597776 CEACAM16Q2WEN9 425 aa9.12□□□□□ -0.95
LSM4-205ENST00000597776 C3orf36Q3SXR2 165 aa9.12□□□□□ -0.95
LSM4-205ENST00000597776 GLIPR1L2Q4G1C9 344 aa9.12□□□□□ -0.95
LSM4-205ENST00000597776 PHYHD1Q5SRE7 291 aa9.12□□□□□ -0.95
LSM4-205ENST00000597776 CARD17Q5XLA6 110 aa9.12□□□□□ -0.95
LSM4-205ENST00000597776 C6orf89Q6UWU4 347 aa9.12□□□□□ -0.95
LSM4-205ENST00000597776 SPATA21Q7Z572 469 aa9.12□□□□□ -0.95
LSM4-205ENST00000597776 MDP1Q86V88 176 aa9.12□□□□□ -0.95
LSM4-205ENST00000597776 TMEM123Q8N131 208 aa9.12□□□□□ -0.95
LSM4-205ENST00000597776 C10orf111Q8N326 155 aa9.12□□□□□ -0.95
LSM4-205ENST00000597776 MIER2Q8N344 545 aa9.12□□□□□ -0.95
LSM4-205ENST00000597776 GPR137CQ8N3F9 429 aa9.12□□□□□ -0.95
LSM4-205ENST00000597776 FAM169BQ8N8A8 192 aa9.12□□□□□ -0.95
LSM4-205ENST00000597776 NUP37Q8NFH4 326 aa9.12□□□□□ -0.95
LSM4-205ENST00000597776 OR4F15Q8NGB8 312 aa9.12□□□□□ -0.95
LSM4-205ENST00000597776 NFKBIDQ8NI38 313 aa9.12□□□□□ -0.95
LSM4-205ENST00000597776 BBS10Q8TAM1 723 aa9.12□□□□□ -0.95
LSM4-205ENST00000597776 OXGR1Q96P68 337 aa9.12□□□□□ -0.95
LSM4-205ENST00000597776 OR2M2Q96R28 347 aa9.12□□□□□ -0.95
LSM4-205ENST00000597776 C19orf24Q9BVV8 132 aa9.12□□□□□ -0.95
LSM4-205ENST00000597776 CRLF2Q9HC73 371 aa9.12□□□□□ -0.95
LSM4-205ENST00000597776 BCL2L10Q9HD36 194 aa9.12□□□□□ -0.95
LSM4-205ENST00000597776 MYOZ1Q9NP98 299 aaPredicted RBP9.12□□□□□ -0.95
LSM4-205ENST00000597776 SLC25A37Q9NYZ2 338 aa9.12□□□□□ -0.95
LSM4-205ENST00000597776 KLHL14Q9P2G3 628 aa9.12□□□□□ -0.95
LSM4-205ENST00000597776 RPS6KB2Q9UBS0 482 aa9.12□□□□□ -0.95
LSM4-205ENST00000597776 TMEM129A0AVI4 362 aa9.11□□□□□ -0.95
LSM4-205ENST00000597776 C5orf58C9J3I9 102 aa9.11□□□□□ -0.95
LSM4-205ENST00000597776 RPL36A-HNRNPH2H7BZ11 118 aa9.11□□□□□ -0.95
LSM4-205ENST00000597776 M0R3G1 203 aa9.11□□□□□ -0.95
LSM4-205ENST00000597776 AIM2O14862 343 aa9.11□□□□□ -0.95
LSM4-205ENST00000597776 TRAF3IP2O43734 574 aaPredicted RBP9.11□□□□□ -0.95
LSM4-205ENST00000597776 TPST1O60507 370 aa9.11□□□□□ -0.95
LSM4-205ENST00000597776 FZD7O75084 574 aa9.11□□□□□ -0.95
LSM4-205ENST00000597776 STAMBPO95630 424 aa9.11□□□□□ -0.95
LSM4-205ENST00000597776 HPRP00739 348 aa9.11□□□□□ -0.95
LSM4-205ENST00000597776 IGFBP1P08833 259 aaPredicted RBP9.11□□□□□ -0.95
LSM4-205ENST00000597776 BMP2P12643 396 aa9.11□□□□□ -0.95
LSM4-205ENST00000597776 HLA-DOBP13765 273 aa9.11□□□□□ -0.95
LSM4-205ENST00000597776 HOXB1P14653 301 aaPredicted RBP9.11□□□□□ -0.95
LSM4-205ENST00000597776 DAOP14920 347 aa9.11□□□□□ -0.95
LSM4-205ENST00000597776 NPR2P20594 1047 aa9.11□□□□□ -0.95
LSM4-205ENST00000597776 PAX7P23759 505 aa9.11□□□□□ -0.95
LSM4-205ENST00000597776 IL2RGP31785 369 aa9.11□□□□□ -0.95
LSM4-205ENST00000597776 CAPZA2P47755 286 aa9.11□□□□□ -0.95
LSM4-205ENST00000597776 MAGOHP61326 146 aaKnown RBP9.11□□□□□ -0.95
LSM4-205ENST00000597776 ALG10BQ5I7T1 473 aa9.11□□□□□ -0.95
LSM4-205ENST00000597776 FAM69AQ5T7M9 428 aa9.11□□□□□ -0.95
LSM4-205ENST00000597776 KRT80Q6KB66 452 aa9.11□□□□□ -0.95
LSM4-205ENST00000597776 CROCCP2Q86T23 111 aa9.11□□□□□ -0.95
LSM4-205ENST00000597776 WDFY1Q8IWB7 410 aa9.11□□□□□ -0.95
LSM4-205ENST00000597776 MSRB3Q8IXL7 192 aa9.11□□□□□ -0.95
LSM4-205ENST00000597776 CDK20Q8IZL9 346 aa9.11□□□□□ -0.95
LSM4-205ENST00000597776 SLC38A4Q969I6 547 aa9.11□□□□□ -0.95
LSM4-205ENST00000597776 SLC35B4Q969S0 331 aa9.11□□□□□ -0.95
LSM4-205ENST00000597776 MS4A3Q96HJ5 214 aa9.11□□□□□ -0.95
LSM4-205ENST00000597776 DOK1Q99704 481 aa9.11□□□□□ -0.95
LSM4-205ENST00000597776 EMC6Q9BV81 110 aa9.11□□□□□ -0.95
LSM4-205ENST00000597776 RAB1BQ9H0U4 201 aa9.11□□□□□ -0.95
LSM4-205ENST00000597776 ZNF442Q9H7R0 627 aa9.11□□□□□ -0.95
LSM4-205ENST00000597776 NOX3Q9HBY0 568 aa9.11□□□□□ -0.95
LSM4-205ENST00000597776 NKIRAS1Q9NYS0 192 aa9.11□□□□□ -0.95
LSM4-205ENST00000597776 SLAMF8Q9P0V8 285 aa9.11□□□□□ -0.95
LSM4-205ENST00000597776 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.11□□□□□ -0.954e-11■■■■■ 41.7
LSM4-205ENST00000597776 TRAV36DV7A0A075B6V5 113 aa9.1□□□□□ -0.95
LSM4-205ENST00000597776 ZNF99A8MXY4 864 aaPredicted RBP9.1□□□□□ -0.95
LSM4-205ENST00000597776 LYNX1G3V0Z9 82 aa9.1□□□□□ -0.95
LSM4-205ENST00000597776 HLA-HP01893 362 aa9.1□□□□□ -0.95
LSM4-205ENST00000597776 ADRA2AP08913 450 aa9.1□□□□□ -0.95
LSM4-205ENST00000597776 LYNX1P0DP58 116 aa9.1□□□□□ -0.95
LSM4-205ENST00000597776 ARAFP10398 606 aa9.1□□□□□ -0.95
LSM4-205ENST00000597776 ETS2P15036 469 aa9.1□□□□□ -0.95
LSM4-205ENST00000597776 NQO1P15559 274 aaKnown RBP9.1□□□□□ -0.95
LSM4-205ENST00000597776 HNF1AP20823 631 aa9.1□□□□□ -0.95
LSM4-205ENST00000597776 PRKAR1BP31321 381 aa9.1□□□□□ -0.95
LSM4-205ENST00000597776 THBS2P35442 1172 aa9.1□□□□□ -0.95
LSM4-205ENST00000597776 ARR3P36575 388 aa9.1□□□□□ -0.95
LSM4-205ENST00000597776 FADDQ13158 208 aa9.1□□□□□ -0.95
LSM4-205ENST00000597776 SNTB2Q13425 540 aaKnown RBP9.1□□□□□ -0.95
LSM4-205ENST00000597776 ADRM1Q16186 407 aa9.1□□□□□ -0.95
LSM4-205ENST00000597776 MSMPQ1L6U9 139 aa9.1□□□□□ -0.95
LSM4-205ENST00000597776 CR1LQ2VPA4 569 aa9.1□□□□□ -0.95
LSM4-205ENST00000597776 GCNT6Q5T4J0 391 aa9.1□□□□□ -0.95
LSM4-205ENST00000597776 H1FNTQ75WM6 255 aaPredicted RBP9.1□□□□□ -0.95
LSM4-205ENST00000597776 FUNDC1Q8IVP5 155 aa9.1□□□□□ -0.95
LSM4-205ENST00000597776 GOLGA6L1Q8N7Z2 621 aa9.1□□□□□ -0.95
LSM4-205ENST00000597776 LSMEM1Q8N8F7 131 aa9.1□□□□□ -0.95
LSM4-205ENST00000597776 ZNF540Q8NDQ6 660 aa9.1□□□□□ -0.95
LSM4-205ENST00000597776 PIK3C3Q8NEB9 887 aa9.1□□□□□ -0.95
LSM4-205ENST00000597776 ANKK1Q8NFD2 765 aa9.1□□□□□ -0.95
LSM4-205ENST00000597776 RNF217Q8TC41 542 aa9.1□□□□□ -0.95
LSM4-205ENST00000597776 CKAP2Q8WWK9 683 aa9.1□□□□□ -0.95
LSM4-205ENST00000597776 SNX18Q96RF0 628 aa9.1□□□□□ -0.95
LSM4-205ENST00000597776 WFDC6Q9BQY6 131 aa9.1□□□□□ -0.95
LSM4-205ENST00000597776 TPK1Q9H3S4 243 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms