RNA–Protein interactions for RNA: ENST00000596842.5

UPF1-204, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,825 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-204ENST00000596842 A0A1B0GVI7 797 aa13.99□□□□□ -0.17
UPF1-204ENST00000596842 OR6C68A6NDL8 312 aa13.99□□□□□ -0.17
UPF1-204ENST00000596842 ANXA2P2A6NMY6 339 aa13.99□□□□□ -0.17
UPF1-204ENST00000596842 ZFPL1O95159 310 aa13.99□□□□□ -0.17
UPF1-204ENST00000596842 CSTAP01040 98 aa13.99□□□□□ -0.17
UPF1-204ENST00000596842 ANXA2P07355 339 aaKnown RBP13.99□□□□□ -0.17
UPF1-204ENST00000596842 C5AR1P21730 350 aa13.99□□□□□ -0.17
UPF1-204ENST00000596842 PAN3Q58A45 887 aaKnown RBP13.99□□□□□ -0.17
UPF1-204ENST00000596842 STPG1Q5TH74 334 aa13.99□□□□□ -0.17
UPF1-204ENST00000596842 OR11G2Q8NGC1 345 aa13.99□□□□□ -0.17
UPF1-204ENST00000596842 DVL3Q92997 716 aaPredicted RBP13.99□□□□□ -0.17
UPF1-204ENST00000596842 OR2A5Q96R48 311 aa13.99□□□□□ -0.17
UPF1-204ENST00000596842 ELF4Q99607 663 aaPredicted RBP13.99□□□□□ -0.17
UPF1-204ENST00000596842 HEXA-AS1Q9H8Q6 139 aa13.99□□□□□ -0.17
UPF1-204ENST00000596842 KLHL9Q9P2J3 617 aa13.99□□□□□ -0.17
UPF1-204ENST00000596842 SLC22A7Q9Y694 548 aa13.99□□□□□ -0.17
UPF1-204ENST00000596842 LOC100509620A0A075B734 347 aa13.99□□□□□ -0.17
UPF1-204ENST00000596842 MEIKINA0A087WXM9 373 aa13.99□□□□□ -0.17
UPF1-204ENST00000596842 HCRTR1O43613 425 aa13.99□□□□□ -0.17
UPF1-204ENST00000596842 GPR75O95800 540 aa13.99□□□□□ -0.17
UPF1-204ENST00000596842 AQP2P41181 271 aa13.99□□□□□ -0.17
UPF1-204ENST00000596842 HAAOP46952 286 aa13.99□□□□□ -0.17
UPF1-204ENST00000596842 B2MP61769 119 aa13.99□□□□□ -0.17
UPF1-204ENST00000596842 HTR4Q13639 388 aa13.99□□□□□ -0.17
UPF1-204ENST00000596842 ZNF776Q68DI1 518 aaPredicted RBP13.99□□□□□ -0.17
UPF1-204ENST00000596842 TMPRSS11FQ6ZWK6 438 aa13.99□□□□□ -0.17
UPF1-204ENST00000596842 LINC00518Q8N0U6 118 aa13.99□□□□□ -0.17
UPF1-204ENST00000596842 SMIM4Q8WVI0 70 aa13.99□□□□□ -0.17
UPF1-204ENST00000596842 ARL6Q9H0F7 186 aa13.99□□□□□ -0.17
UPF1-204ENST00000596842 LRIT1Q9P2V4 623 aa13.99□□□□□ -0.17
UPF1-204ENST00000596842 SPTBN5Q9NRC6 3674 aaKnown RBP13.98□□□□□ -0.17
UPF1-204ENST00000596842 A0A0A6YYC8 382 aaPredicted RBP13.98□□□□□ -0.17
UPF1-204ENST00000596842 I3L1I5 382 aaPredicted RBP13.98□□□□□ -0.17
UPF1-204ENST00000596842 THBS1P07996 1170 aa13.98□□□□□ -0.17
UPF1-204ENST00000596842 CDK2P24941 298 aa13.98□□□□□ -0.17
UPF1-204ENST00000596842 NANOS3P60323 173 aaKnown RBP13.98□□□□□ -0.17
UPF1-204ENST00000596842 SQSTM1Q13501 440 aa13.98□□□□□ -0.17
UPF1-204ENST00000596842 ZNF676Q8N7Q3 588 aa13.98□□□□□ -0.17
UPF1-204ENST00000596842 OR6N2Q8NGY6 317 aa13.98□□□□□ -0.17
UPF1-204ENST00000596842 TNFAIP8L1Q8WVP5 186 aa13.98□□□□□ -0.17
UPF1-204ENST00000596842 ZFYVE21Q9BQ24 234 aa13.98□□□□□ -0.17
UPF1-204ENST00000596842 TINAGL1Q9GZM7 467 aaPredicted RBP13.98□□□□□ -0.17
UPF1-204ENST00000596842 DTX4Q9Y2E6 619 aa13.98□□□□□ -0.17
UPF1-204ENST00000596842 KLF9Q13886 244 aaPredicted RBP13.98□□□□□ -0.17
UPF1-204ENST00000596842 USF2Q15853 346 aaPredicted RBP13.98□□□□□ -0.17
UPF1-204ENST00000596842 RPL13AP3Q6NVV1 102 aa13.98□□□□□ -0.17
UPF1-204ENST00000596842 SLC16A13Q7RTY0 426 aa13.98□□□□□ -0.17
UPF1-204ENST00000596842 PXKQ7Z7A4 578 aa13.98□□□□□ -0.17
UPF1-204ENST00000596842 JAZF1Q86VZ6 243 aa13.98□□□□□ -0.17
UPF1-204ENST00000596842 CSNK1A1LQ8N752 337 aa13.98□□□□□ -0.17
UPF1-204ENST00000596842 LINC00052Q96N35 136 aa13.98□□□□□ -0.17
UPF1-204ENST00000596842 SORCS2Q96PQ0 1159 aa13.98□□□□□ -0.17
UPF1-204ENST00000596842 INPP5EQ9NRR6 644 aa13.98□□□□□ -0.17
UPF1-204ENST00000596842 V9GY05 133 aa13.98□□□□□ -0.17
UPF1-204ENST00000596842 TCRBV16S1A1N1A0A5B0 115 aa13.98□□□□□ -0.17
UPF1-204ENST00000596842 PIN1P1O15428 100 aa13.98□□□□□ -0.17
UPF1-204ENST00000596842 UBE2NLQ5JXB2 153 aa13.98□□□□□ -0.17
UPF1-204ENST00000596842 SHEQ5VZ18 495 aa13.98□□□□□ -0.17
UPF1-204ENST00000596842 FAM220AQ7Z4H9 259 aa13.98□□□□□ -0.17
UPF1-204ENST00000596842 OR1F2PQ96R84 312 aa13.98□□□□□ -0.17
UPF1-204ENST00000596842 PDCD10Q9BUL8 212 aa13.98□□□□□ -0.17
UPF1-204ENST00000596842 IL23AQ9NPF7 189 aa13.98□□□□□ -0.17
UPF1-204ENST00000596842 SLC17A4Q9Y2C5 497 aa13.98□□□□□ -0.17
UPF1-204ENST00000596842 NUP210Q8TEM1 1887 aaPredicted RBP13.97□□□□□ -0.17
UPF1-204ENST00000596842 LINC01553A4QN01 128 aa13.97□□□□□ -0.17
UPF1-204ENST00000596842 IFITM5A6NNB3 132 aa13.97□□□□□ -0.17
UPF1-204ENST00000596842 ECDO95905 644 aaPredicted RBP13.97□□□□□ -0.17
UPF1-204ENST00000596842 OR2T7P0C7T2 308 aa13.97□□□□□ -0.17
UPF1-204ENST00000596842 SULT1A3P0DMM9 295 aa13.97□□□□□ -0.17
UPF1-204ENST00000596842 SULT1A4P0DMN0 295 aa13.97□□□□□ -0.17
UPF1-204ENST00000596842 LIPCP11150 499 aa13.97□□□□□ -0.17
UPF1-204ENST00000596842 STARP49675 285 aa13.97□□□□□ -0.17
UPF1-204ENST00000596842 ACTA2P62736 377 aa13.97□□□□□ -0.17
UPF1-204ENST00000596842 ACTG2P63267 376 aa13.97□□□□□ -0.17
UPF1-204ENST00000596842 PLA2G7Q13093 441 aa13.97□□□□□ -0.17
UPF1-204ENST00000596842 ENPP2Q13822 863 aa13.97□□□□□ -0.17
UPF1-204ENST00000596842 PCGF3Q3KNV8 242 aa13.97□□□□□ -0.17
UPF1-204ENST00000596842 NUDT18Q6ZVK8 323 aa13.97□□□□□ -0.17
UPF1-204ENST00000596842 USP53Q70EK8 1073 aa13.97□□□□□ -0.17
UPF1-204ENST00000596842 TMED4Q7Z7H5 227 aa13.97□□□□□ -0.17
UPF1-204ENST00000596842 OR2T27Q8NH04 317 aa13.97□□□□□ -0.17
UPF1-204ENST00000596842 CA5BP1Q8WTZ4 195 aa13.97□□□□□ -0.17
UPF1-204ENST00000596842 GSX2Q9BZM3 304 aa13.97□□□□□ -0.17
UPF1-204ENST00000596842 SLITRK2Q9H156 845 aa13.97□□□□□ -0.17
UPF1-204ENST00000596842 KIR3DX1Q9H7L2 352 aa13.97□□□□□ -0.17
UPF1-204ENST00000596842 A0A0B4J2E0 115 aa13.97□□□□□ -0.17
UPF1-204ENST00000596842 A0A1B0GX12 115 aa13.97□□□□□ -0.17
UPF1-204ENST00000596842 PDCD5O14737 125 aa13.97□□□□□ -0.17
UPF1-204ENST00000596842 BRINP1O60477 761 aa13.97□□□□□ -0.17
UPF1-204ENST00000596842 NUDT14O95848 222 aa13.97□□□□□ -0.17
UPF1-204ENST00000596842 PLGP00747 810 aaPredicted RBP13.97□□□□□ -0.17
UPF1-204ENST00000596842 ITPKBP27987 946 aa13.97□□□□□ -0.17
UPF1-204ENST00000596842 AKR1C2P52895 323 aa13.97□□□□□ -0.17
UPF1-204ENST00000596842 AKR1C1Q04828 323 aa13.97□□□□□ -0.17
UPF1-204ENST00000596842 MELKQ14680 651 aa13.97□□□□□ -0.17
UPF1-204ENST00000596842 LRRC37A5PQ49AS3 106 aa13.97□□□□□ -0.17
UPF1-204ENST00000596842 GPR139Q6DWJ6 353 aa13.97□□□□□ -0.17
UPF1-204ENST00000596842 ZNF600Q6ZNG1 722 aa13.97□□□□□ -0.17
UPF1-204ENST00000596842 OR4C3Q8NH37 302 aa13.97□□□□□ -0.17
UPF1-204ENST00000596842 LMF1Q96S06 567 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms