RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 ZNF837Q96EG3 531 aaPredicted RBP11.39□□□□□ -0.59
LIG1-212ENST00000596549 OXGR1Q96P68 337 aa11.39□□□□□ -0.59
LIG1-212ENST00000596549 OR2M2Q96R28 347 aa11.39□□□□□ -0.59
LIG1-212ENST00000596549 MCHR1Q99705 422 aa11.39□□□□□ -0.59
LIG1-212ENST00000596549 CBLN4Q9NTU7 201 aa11.39□□□□□ -0.59
LIG1-212ENST00000596549 FAIMQ9NVQ4 179 aa11.39□□□□□ -0.59
LIG1-212ENST00000596549 USP22Q9UPT9 525 aa11.39□□□□□ -0.59
LIG1-212ENST00000596549 A0A096LPE4 126 aa11.38□□□□□ -0.59
LIG1-212ENST00000596549 A0A1W2PPZ6 126 aa11.38□□□□□ -0.59
LIG1-212ENST00000596549 CPSF4LA6NMK7 179 aaKnown RBP11.38□□□□□ -0.59
LIG1-212ENST00000596549 RNF223E7ERA6 249 aa11.38□□□□□ -0.59
LIG1-212ENST00000596549 MS4A18H0YCH9 400 aa11.38□□□□□ -0.59
LIG1-212ENST00000596549 RPL36A-HNRNPH2H7BZ11 118 aa11.38□□□□□ -0.59
LIG1-212ENST00000596549 M0QX08 132 aa11.38□□□□□ -0.59
LIG1-212ENST00000596549 CHP2O43745 196 aa11.38□□□□□ -0.59
LIG1-212ENST00000596549 FMO6PO60774 539 aa11.38□□□□□ -0.59
LIG1-212ENST00000596549 KRT33AO76009 404 aa11.38□□□□□ -0.59
LIG1-212ENST00000596549 SEC14L2O76054 403 aa11.38□□□□□ -0.59
LIG1-212ENST00000596549 VMACQ2NL98 169 aa11.38□□□□□ -0.59
LIG1-212ENST00000596549 MS4A18Q3C1V0 323 aa11.38□□□□□ -0.59
LIG1-212ENST00000596549 ENTPD8Q5MY95 495 aa11.38□□□□□ -0.59
LIG1-212ENST00000596549 SWT1Q5T5J6 900 aaKnown RBP11.38□□□□□ -0.59
LIG1-212ENST00000596549 REP15Q6BDI9 236 aa11.38□□□□□ -0.59
LIG1-212ENST00000596549 ZNF613Q6PF04 617 aa11.38□□□□□ -0.59
LIG1-212ENST00000596549 NHLRC1Q6VVB1 395 aa11.38□□□□□ -0.59
LIG1-212ENST00000596549 LINC00114Q6XXX2 140 aa11.38□□□□□ -0.59
LIG1-212ENST00000596549 H1FNTQ75WM6 255 aaPredicted RBP11.38□□□□□ -0.59
LIG1-212ENST00000596549 CALHM3Q86XJ0 350 aa11.38□□□□□ -0.59
LIG1-212ENST00000596549 MUC15Q8N387 334 aa11.38□□□□□ -0.59
LIG1-212ENST00000596549 OR6S1Q8NH40 331 aa11.38□□□□□ -0.59
LIG1-212ENST00000596549 VANGL1Q8TAA9 524 aaPredicted RBP11.38□□□□□ -0.59
LIG1-212ENST00000596549 RNF217Q8TC41 542 aa11.38□□□□□ -0.59
LIG1-212ENST00000596549 HTRA1Q92743 480 aa11.38□□□□□ -0.59
LIG1-212ENST00000596549 BCL2L2Q92843 193 aaPredicted RBP11.38□□□□□ -0.59
LIG1-212ENST00000596549 TMEM43Q9BTV4 400 aa11.38□□□□□ -0.59
LIG1-212ENST00000596549 EVA1AQ9H8M9 152 aa11.38□□□□□ -0.59
LIG1-212ENST00000596549 TMEM27Q9HBJ8 222 aa11.38□□□□□ -0.59
LIG1-212ENST00000596549 OBP2BQ9NPH6 170 aa11.38□□□□□ -0.59
LIG1-212ENST00000596549 CRNNQ9UBG3 495 aaPredicted RBP11.38□□□□□ -0.59
LIG1-212ENST00000596549 SLC13A4Q9UKG4 626 aa11.38□□□□□ -0.59
LIG1-212ENST00000596549 MOKQ9UQ07 419 aa11.38□□□□□ -0.59
LIG1-212ENST00000596549 NAV3Q8IVL0 2385 aa11.38□□□□□ -0.59
LIG1-212ENST00000596549 A0A096LNT2 108 aa11.37□□□□□ -0.59
LIG1-212ENST00000596549 LOC102725191A0A1B0GVB3 256 aa11.37□□□□□ -0.59
LIG1-212ENST00000596549 OR6C65A6NJZ3 312 aa11.37□□□□□ -0.59
LIG1-212ENST00000596549 SLC43A1O75387 559 aa11.37□□□□□ -0.59
LIG1-212ENST00000596549 WNT11O96014 354 aa11.37□□□□□ -0.59
LIG1-212ENST00000596549 IGLV1-44P01699 117 aa11.37□□□□□ -0.59
LIG1-212ENST00000596549 C8BP07358 591 aa11.37□□□□□ -0.59
LIG1-212ENST00000596549 NQO1P15559 274 aaKnown RBP11.37□□□□□ -0.59
LIG1-212ENST00000596549 FABP6P51161 128 aa11.37□□□□□ -0.59
LIG1-212ENST00000596549 POU3F1Q03052 451 aaPredicted RBP11.37□□□□□ -0.59
LIG1-212ENST00000596549 KLF10Q13118 480 aa11.37□□□□□ -0.59
LIG1-212ENST00000596549 CEACAM16Q2WEN9 425 aa11.37□□□□□ -0.59
LIG1-212ENST00000596549 C1QTNF12Q5T7M4 302 aa11.37□□□□□ -0.59
LIG1-212ENST00000596549 NANOGP8Q6NSW7 305 aa11.37□□□□□ -0.59
LIG1-212ENST00000596549 ZNF544Q6NX49 715 aa11.37□□□□□ -0.59
LIG1-212ENST00000596549 FBXL14Q8N1E6 418 aa11.37□□□□□ -0.59
LIG1-212ENST00000596549 SCAIQ8N9R8 606 aa11.37□□□□□ -0.59
LIG1-212ENST00000596549 MAGEE2Q8TD90 523 aaPredicted RBP11.37□□□□□ -0.59
LIG1-212ENST00000596549 ADAMTS16Q8TE57 1224 aa11.37□□□□□ -0.59
LIG1-212ENST00000596549 HS6ST2Q96MM7 605 aa11.37□□□□□ -0.59
LIG1-212ENST00000596549 SLC38A2Q96QD8 506 aa11.37□□□□□ -0.59
LIG1-212ENST00000596549 EPYCQ99645 322 aa11.37□□□□□ -0.59
LIG1-212ENST00000596549 ZNF426Q9BUY5 554 aa11.37□□□□□ -0.59
LIG1-212ENST00000596549 EMC6Q9BV81 110 aa11.37□□□□□ -0.59
LIG1-212ENST00000596549 PCDHAC1Q9H158 963 aa11.37□□□□□ -0.59
LIG1-212ENST00000596549 NANOGQ9H9S0 305 aa11.37□□□□□ -0.59
LIG1-212ENST00000596549 GPR35Q9HC97 309 aa11.37□□□□□ -0.59
LIG1-212ENST00000596549 SAR1AQ9NR31 198 aa11.37□□□□□ -0.59
LIG1-212ENST00000596549 MED29Q9NX70 200 aa11.37□□□□□ -0.59
LIG1-212ENST00000596549 MRPL39Q9NYK5 338 aaKnown RBP11.37□□□□□ -0.59
LIG1-212ENST00000596549 CORINQ9Y5Q5 1042 aa11.37□□□□□ -0.59
LIG1-212ENST00000596549 ATP23Q9Y6H3 246 aa11.37□□□□□ -0.59
LIG1-212ENST00000596549 NIPBLQ6KC79 2804 aaeCLIP11.37□□□□□ -0.59
LIG1-212ENST00000596549 INAFM1C9JVW0 142 aa11.36□□□□□ -0.59
LIG1-212ENST00000596549 H7C417 338 aa11.36□□□□□ -0.59
LIG1-212ENST00000596549 MRASO14807 208 aa11.36□□□□□ -0.59
LIG1-212ENST00000596549 IGKV3-15P01624 115 aa11.36□□□□□ -0.59
LIG1-212ENST00000596549 CELA3BP08861 270 aa11.36□□□□□ -0.59
LIG1-212ENST00000596549 CECR9P0C854 216 aa11.36□□□□□ -0.59
LIG1-212ENST00000596549 TROVE2P10155 538 aaKnown RBP eCLIP11.36□□□□□ -0.59
LIG1-212ENST00000596549 TNFRSF1BP20333 461 aa11.36□□□□□ -0.59
LIG1-212ENST00000596549 PCSK6P29122 969 aa11.36□□□□□ -0.59
LIG1-212ENST00000596549 CALCRP30988 508 aa11.36□□□□□ -0.59
LIG1-212ENST00000596549 ARFIP2P53365 341 aa11.36□□□□□ -0.59
LIG1-212ENST00000596549 SH3BGRP55822 239 aaPredicted RBP11.36□□□□□ -0.59
LIG1-212ENST00000596549 UBE2NP61088 152 aaKnown RBP11.36□□□□□ -0.59
LIG1-212ENST00000596549 ARF1P84077 181 aaKnown RBP11.36□□□□□ -0.59
LIG1-212ENST00000596549 IL1RL1Q01638 556 aa11.36□□□□□ -0.59
LIG1-212ENST00000596549 NAAAQ02083 359 aa11.36□□□□□ -0.59
LIG1-212ENST00000596549 GUCY1A3Q02108 690 aa11.36□□□□□ -0.59
LIG1-212ENST00000596549 PUDPQ08623 228 aa11.36□□□□□ -0.59
LIG1-212ENST00000596549 C1DQ13901 141 aaKnown RBP11.36□□□□□ -0.59
LIG1-212ENST00000596549 MFSD13AQ14CX5 517 aa11.36□□□□□ -0.59
LIG1-212ENST00000596549 COQ5Q5HYK3 327 aa11.36□□□□□ -0.59
LIG1-212ENST00000596549 HMBOX1Q6NT76 420 aa11.36□□□□□ -0.59
LIG1-212ENST00000596549 ANKRD16Q6P6B7 361 aa11.36□□□□□ -0.59
LIG1-212ENST00000596549 CCDC80Q76M96 950 aa11.36□□□□□ -0.59
LIG1-212ENST00000596549 PATL1Q86TB9 770 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms