RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 MT-ATP6P00846 226 aa9.64□□□□□ -0.87
SHKBP1-206ENST00000595523 NQO1P15559 274 aaKnown RBP9.64□□□□□ -0.87
SHKBP1-206ENST00000595523 ZNF43P17038 809 aa9.64□□□□□ -0.87
SHKBP1-206ENST00000595523 MPGP29372 298 aa9.64□□□□□ -0.87
SHKBP1-206ENST00000595523 TAS2R41P59536 307 aa9.64□□□□□ -0.87
SHKBP1-206ENST00000595523 POU3F1Q03052 451 aaPredicted RBP9.64□□□□□ -0.87
SHKBP1-206ENST00000595523 BSPH1Q075Z2 132 aa9.64□□□□□ -0.87
SHKBP1-206ENST00000595523 PMS2P3Q13401 168 aa9.64□□□□□ -0.87
SHKBP1-206ENST00000595523 KEAP1Q14145 624 aa9.64□□□□□ -0.87
SHKBP1-206ENST00000595523 ACKR1Q16570 336 aa9.64□□□□□ -0.87
SHKBP1-206ENST00000595523 TTC33Q6PID6 262 aaPredicted RBP9.64□□□□□ -0.87
SHKBP1-206ENST00000595523 SPNS3Q6ZMD2 512 aa9.64□□□□□ -0.87
SHKBP1-206ENST00000595523 CBLL1Q75N03 491 aa9.64□□□□□ -0.87
SHKBP1-206ENST00000595523 TSEN54Q7Z6J9 526 aaKnown RBP9.64□□□□□ -0.87
SHKBP1-206ENST00000595523 P2RY8Q86VZ1 359 aa9.64□□□□□ -0.87
SHKBP1-206ENST00000595523 RNF148Q8N7C7 305 aa9.64□□□□□ -0.87
SHKBP1-206ENST00000595523 POMGNT2Q8NAT1 580 aa9.64□□□□□ -0.87
SHKBP1-206ENST00000595523 RBM15BQ8NDT2 890 aaKnown RBP9.64□□□□□ -0.87
SHKBP1-206ENST00000595523 C1orf162Q8NEQ5 155 aaPredicted RBP9.64□□□□□ -0.87
SHKBP1-206ENST00000595523 OR52N5Q8NH56 324 aa9.64□□□□□ -0.87
SHKBP1-206ENST00000595523 PFN4Q8NHR9 129 aa9.64□□□□□ -0.87
SHKBP1-206ENST00000595523 TMEM255BQ8WV15 326 aa9.64□□□□□ -0.87
SHKBP1-206ENST00000595523 NEUROG1Q92886 237 aa9.64□□□□□ -0.87
SHKBP1-206ENST00000595523 BOD1Q96IK1 185 aa9.64□□□□□ -0.87
SHKBP1-206ENST00000595523 TXNDC15Q96J42 360 aa9.64□□□□□ -0.87
SHKBP1-206ENST00000595523 LRRC37BQ96QE4 947 aa9.64□□□□□ -0.87
SHKBP1-206ENST00000595523 OR2M2Q96R28 347 aa9.64□□□□□ -0.87
SHKBP1-206ENST00000595523 KCTD14Q9BQ13 255 aaPredicted RBP9.64□□□□□ -0.87
SHKBP1-206ENST00000595523 ASPNQ9BXN1 380 aa9.64□□□□□ -0.87
SHKBP1-206ENST00000595523 LINC00470Q9BZP3 86 aa9.64□□□□□ -0.87
SHKBP1-206ENST00000595523 SLC19A3Q9BZV2 496 aa9.64□□□□□ -0.87
SHKBP1-206ENST00000595523 POLR2J2Q9GZM3 115 aaKnown RBP9.64□□□□□ -0.87
SHKBP1-206ENST00000595523 POLR2J3Q9H1A7 115 aaKnown RBP9.64□□□□□ -0.87
SHKBP1-206ENST00000595523 NELFAQ9H3P2 528 aa9.64□□□□□ -0.87
SHKBP1-206ENST00000595523 UBTD1Q9HAC8 227 aa9.64□□□□□ -0.87
SHKBP1-206ENST00000595523 SPAG4Q9NPE6 437 aa9.64□□□□□ -0.87
SHKBP1-206ENST00000595523 MAN2C1Q9NTJ4 1040 aa9.64□□□□□ -0.87
SHKBP1-206ENST00000595523 C20orf141Q9NUB4 165 aa9.64□□□□□ -0.87
SHKBP1-206ENST00000595523 TAGLN3Q9UI15 199 aa9.64□□□□□ -0.87
SHKBP1-206ENST00000595523 RIMS3Q9UJD0 308 aa9.64□□□□□ -0.87
SHKBP1-206ENST00000595523 CHD3Q12873 2000 aaKnown RBP9.63□□□□□ -0.87
SHKBP1-206ENST00000595523 NSD1Q96L73 2696 aaPredicted RBP9.63□□□□□ -0.87
SHKBP1-206ENST00000595523 NIPBLQ6KC79 2804 aaeCLIP9.63□□□□□ -0.87
SHKBP1-206ENST00000595523 J3KTA2 159 aa9.63□□□□□ -0.87
SHKBP1-206ENST00000595523 DCTN3O75935 186 aa9.63□□□□□ -0.87
SHKBP1-206ENST00000595523 PRSS23O95084 383 aa9.63□□□□□ -0.87
SHKBP1-206ENST00000595523 ZNF682O95780 498 aa9.63□□□□□ -0.87
SHKBP1-206ENST00000595523 FAM107AO95990 144 aa9.63□□□□□ -0.87
SHKBP1-206ENST00000595523 SERPINA1P01009 418 aa9.63□□□□□ -0.87
SHKBP1-206ENST00000595523 MT-ND1P03886 318 aa9.63□□□□□ -0.87
SHKBP1-206ENST00000595523 ASAH2BP0C7U1 165 aa9.63□□□□□ -0.87
SHKBP1-206ENST00000595523 LSM11P83369 360 aaKnown RBP eCLIP9.63□□□□□ -0.87
SHKBP1-206ENST00000595523 PUDPQ08623 228 aa9.63□□□□□ -0.87
SHKBP1-206ENST00000595523 C1DQ13901 141 aaKnown RBP9.63□□□□□ -0.87
SHKBP1-206ENST00000595523 FXNQ16595 210 aa9.63□□□□□ -0.87
SHKBP1-206ENST00000595523 DEFB113Q30KQ7 82 aa9.63□□□□□ -0.87
SHKBP1-206ENST00000595523 HIKESHIQ53FT3 197 aa9.63□□□□□ -0.87
SHKBP1-206ENST00000595523 PHYHD1Q5SRE7 291 aa9.63□□□□□ -0.87
SHKBP1-206ENST00000595523 OR7E24Q6IFN5 339 aa9.63□□□□□ -0.87
SHKBP1-206ENST00000595523 KRTAP1-3Q8IUG1 177 aa9.63□□□□□ -0.87
SHKBP1-206ENST00000595523 UEVLDQ8IX04 471 aa9.63□□□□□ -0.87
SHKBP1-206ENST00000595523 FITM2Q8N6M3 262 aa9.63□□□□□ -0.87
SHKBP1-206ENST00000595523 C10orf53Q8N6V4 93 aa9.63□□□□□ -0.87
SHKBP1-206ENST00000595523 FAM156AQ8NDB6 213 aa9.63□□□□□ -0.87
SHKBP1-206ENST00000595523 KBTBD8Q8NFY9 601 aa9.63□□□□□ -0.87
SHKBP1-206ENST00000595523 OR5J2Q8NH18 312 aa9.63□□□□□ -0.87
SHKBP1-206ENST00000595523 ZNF837Q96EG3 531 aaPredicted RBP9.63□□□□□ -0.87
SHKBP1-206ENST00000595523 HSH2DQ96JZ2 352 aa9.63□□□□□ -0.87
SHKBP1-206ENST00000595523 PRRC1Q96M27 445 aa9.63□□□□□ -0.87
SHKBP1-206ENST00000595523 ALPK1Q96QP1 1244 aa9.63□□□□□ -0.87
SHKBP1-206ENST00000595523 EMC6Q9BV81 110 aa9.63□□□□□ -0.87
SHKBP1-206ENST00000595523 ESRP2Q9H6T0 727 aaKnown RBP9.63□□□□□ -0.87
SHKBP1-206ENST00000595523 FKRPQ9H9S5 495 aa9.63□□□□□ -0.87
SHKBP1-206ENST00000595523 SLC17A5Q9NRA2 495 aa9.63□□□□□ -0.87
SHKBP1-206ENST00000595523 MED29Q9NX70 200 aa9.63□□□□□ -0.87
SHKBP1-206ENST00000595523 TAS2R5Q9NYW4 299 aa9.63□□□□□ -0.87
SHKBP1-206ENST00000595523 EGFL7Q9UHF1 273 aa9.63□□□□□ -0.87
SHKBP1-206ENST00000595523 RNF115Q9Y4L5 304 aa9.63□□□□□ -0.87
SHKBP1-206ENST00000595523 SLC35F4A4IF30 521 aa9.62□□□□□ -0.87
SHKBP1-206ENST00000595523 OR6C65A6NJZ3 312 aa9.62□□□□□ -0.87
SHKBP1-206ENST00000595523 SHISA9B4DS77 424 aa9.62□□□□□ -0.87
SHKBP1-206ENST00000595523 ZNF587BE7ETH6 402 aa9.62□□□□□ -0.87
SHKBP1-206ENST00000595523 C11orf98E9PRG8 122 aa9.62□□□□□ -0.87
SHKBP1-206ENST00000595523 RPL36A-HNRNPH2H7BZ11 118 aa9.62□□□□□ -0.87
SHKBP1-206ENST00000595523 NDUFAB1O14561 156 aa9.62□□□□□ -0.87
SHKBP1-206ENST00000595523 HS3ST1O14792 307 aa9.62□□□□□ -0.87
SHKBP1-206ENST00000595523 GSTA4O15217 222 aa9.62□□□□□ -0.87
SHKBP1-206ENST00000595523 CLOCKO15516 846 aa9.62□□□□□ -0.87
SHKBP1-206ENST00000595523 PIP5K1CO60331 668 aa9.62□□□□□ -0.87
SHKBP1-206ENST00000595523 SLC43A1O75387 559 aa9.62□□□□□ -0.87
SHKBP1-206ENST00000595523 CD3EP07766 207 aa9.62□□□□□ -0.87
SHKBP1-206ENST00000595523 ADORA3P0DMS8 318 aa9.62□□□□□ -0.87
SHKBP1-206ENST00000595523 THRBP10828 461 aa9.62□□□□□ -0.87
SHKBP1-206ENST00000595523 CDH2P19022 906 aaPredicted RBP9.62□□□□□ -0.87
SHKBP1-206ENST00000595523 RBM34P42696 430 aaKnown RBP9.62□□□□□ -0.87
SHKBP1-206ENST00000595523 YAP1P46937 504 aaKnown RBP9.62□□□□□ -0.87
SHKBP1-206ENST00000595523 ZNF83P51522 516 aa9.62□□□□□ -0.87
SHKBP1-206ENST00000595523 IL1RL1Q01638 556 aa9.62□□□□□ -0.87
SHKBP1-206ENST00000595523 ROR2Q01974 943 aaKnown RBP9.62□□□□□ -0.87
SHKBP1-206ENST00000595523 SPOCK1Q08629 439 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms