RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 ANKK1Q8NFD2 765 aa14.13□□□□□ -0.15
LIG1-205ENST00000593425 OR9I1Q8NGQ6 314 aa14.13□□□□□ -0.15
LIG1-205ENST00000593425 ZNF417Q8TAU3 575 aa14.13□□□□□ -0.15
LIG1-205ENST00000593425 CKAP2Q8WWK9 683 aa14.13□□□□□ -0.15
LIG1-205ENST00000593425 ZNF587Q96SQ5 575 aaPredicted RBP14.13□□□□□ -0.15
LIG1-205ENST00000593425 RSPO3Q9BXY4 272 aaPredicted RBP14.13□□□□□ -0.15
LIG1-205ENST00000593425 CENPHQ9H3R5 247 aa14.13□□□□□ -0.15
LIG1-205ENST00000593425 TPK1Q9H3S4 243 aa14.13□□□□□ -0.15
LIG1-205ENST00000593425 NOX3Q9HBY0 568 aa14.13□□□□□ -0.15
LIG1-205ENST00000593425 CRLF2Q9HC73 371 aa14.13□□□□□ -0.15
LIG1-205ENST00000593425 DYNLRB1Q9NP97 96 aa14.13□□□□□ -0.15
LIG1-205ENST00000593425 FBXO9Q9UK97 447 aaPredicted RBP14.13□□□□□ -0.15
LIG1-205ENST00000593425 ZNF232Q9UNY5 417 aa14.13□□□□□ -0.15
LIG1-205ENST00000593425 TRAF3IP2O43734 574 aaPredicted RBP14.12□□□□□ -0.15
LIG1-205ENST00000593425 SLC22A3O75751 556 aa14.12□□□□□ -0.15
LIG1-205ENST00000593425 IDO1P14902 403 aa14.12□□□□□ -0.15
LIG1-205ENST00000593425 ITGA2P17301 1181 aa14.12□□□□□ -0.15
LIG1-205ENST00000593425 GRPRP30550 384 aa14.12□□□□□ -0.15
LIG1-205ENST00000593425 ARR3P36575 388 aa14.12□□□□□ -0.15
LIG1-205ENST00000593425 CAPZA2P47755 286 aa14.12□□□□□ -0.15
LIG1-205ENST00000593425 CDH15P55291 814 aa14.12□□□□□ -0.15
LIG1-205ENST00000593425 WDR4P57081 412 aaKnown RBP14.12□□□□□ -0.15
LIG1-205ENST00000593425 RIN1Q13671 783 aa14.12□□□□□ -0.15
LIG1-205ENST00000593425 NXNQ6DKJ4 435 aa14.12□□□□□ -0.15
LIG1-205ENST00000593425 C6orf89Q6UWU4 347 aa14.12□□□□□ -0.15
LIG1-205ENST00000593425 TMEM123Q8N131 208 aa14.12□□□□□ -0.15
LIG1-205ENST00000593425 RFLNBQ8N5W9 214 aa14.12□□□□□ -0.15
LIG1-205ENST00000593425 ANKRD42Q8N9B4 389 aa14.12□□□□□ -0.15
LIG1-205ENST00000593425 LINC01356Q8N9X3 169 aa14.12□□□□□ -0.15
LIG1-205ENST00000593425 UBASH3BQ8TF42 649 aa14.12□□□□□ -0.15
LIG1-205ENST00000593425 HPS1Q92902 700 aa14.12□□□□□ -0.15
LIG1-205ENST00000593425 MAL2Q969L2 176 aa14.12□□□□□ -0.15
LIG1-205ENST00000593425 TAAR8Q969N4 342 aa14.12□□□□□ -0.15
LIG1-205ENST00000593425 TRIM44Q96DX7 344 aaPredicted RBP14.12□□□□□ -0.15
LIG1-205ENST00000593425 MAELQ96JY0 434 aaKnown RBP14.12□□□□□ -0.15
LIG1-205ENST00000593425 ANKRD27Q96NW4 1050 aa14.12□□□□□ -0.15
LIG1-205ENST00000593425 OR2M2Q96R28 347 aa14.12□□□□□ -0.15
LIG1-205ENST00000593425 ARMC7Q9H6L4 198 aa14.12□□□□□ -0.15
LIG1-205ENST00000593425 CACYBPQ9HB71 228 aaKnown RBP14.12□□□□□ -0.15
LIG1-205ENST00000593425 TMEFF2Q9UIK5 374 aaPredicted RBP14.12□□□□□ -0.15
LIG1-205ENST00000593425 IFT52Q9Y366 437 aa14.12□□□□□ -0.15
LIG1-205ENST00000593425 IGKV1D-42A0A075B6H8 117 aa14.11□□□□□ -0.15
LIG1-205ENST00000593425 TRPC5OSA6NMA1 111 aa14.11□□□□□ -0.15
LIG1-205ENST00000593425 ZNF99A8MXY4 864 aaPredicted RBP14.11□□□□□ -0.15
LIG1-205ENST00000593425 AIM2O14862 343 aa14.11□□□□□ -0.15
LIG1-205ENST00000593425 TCF21O43680 179 aa14.11□□□□□ -0.15
LIG1-205ENST00000593425 SNNO75324 88 aaPredicted RBP14.11□□□□□ -0.15
LIG1-205ENST00000593425 ERCC1P07992 297 aaPredicted RBP14.11□□□□□ -0.15
LIG1-205ENST00000593425 ADRA2AP08913 450 aa14.11□□□□□ -0.15
LIG1-205ENST00000593425 CBLP22681 906 aa14.11□□□□□ -0.15
LIG1-205ENST00000593425 HTR2AP28223 471 aa14.11□□□□□ -0.15
LIG1-205ENST00000593425 C1DQ13901 141 aaKnown RBP14.11□□□□□ -0.15
LIG1-205ENST00000593425 CCNIQ14094 377 aa14.11□□□□□ -0.15
LIG1-205ENST00000593425 DAG1Q14118 895 aa14.11□□□□□ -0.15
LIG1-205ENST00000593425 SLC9B1Q4ZJI4 515 aa14.11□□□□□ -0.15
LIG1-205ENST00000593425 C6orf10Q5SRN2 563 aa14.11□□□□□ -0.15
LIG1-205ENST00000593425 CEP85LQ5SZL2 805 aa14.11□□□□□ -0.15
LIG1-205ENST00000593425 FAM69AQ5T7M9 428 aa14.11□□□□□ -0.15
LIG1-205ENST00000593425 MAVSQ7Z434 540 aa14.11□□□□□ -0.15
LIG1-205ENST00000593425 COMTD1Q86VU5 262 aa14.11□□□□□ -0.15
LIG1-205ENST00000593425 SLC35B4Q969S0 331 aa14.11□□□□□ -0.15
LIG1-205ENST00000593425 MS4A3Q96HJ5 214 aa14.11□□□□□ -0.15
LIG1-205ENST00000593425 ITCHQ96J02 903 aa14.11□□□□□ -0.15
LIG1-205ENST00000593425 RMND5AQ9H871 391 aa14.11□□□□□ -0.15
LIG1-205ENST00000593425 BCL2L10Q9HD36 194 aa14.11□□□□□ -0.15
LIG1-205ENST00000593425 THUMPD1Q9NXG2 353 aaKnown RBP14.11□□□□□ -0.15
LIG1-205ENST00000593425 ZIM2Q9NZV7 527 aa14.11□□□□□ -0.15
LIG1-205ENST00000593425 USP22Q9UPT9 525 aa14.11□□□□□ -0.15
LIG1-205ENST00000593425 TMEM247A6NEH6 219 aa14.1□□□□□ -0.15
LIG1-205ENST00000593425 VSTM5A8MXK1 200 aa14.1□□□□□ -0.15
LIG1-205ENST00000593425 M0R3G1 203 aa14.1□□□□□ -0.15
LIG1-205ENST00000593425 HPRP00739 348 aa14.1□□□□□ -0.15
LIG1-205ENST00000593425 HLA-HP01893 362 aa14.1□□□□□ -0.15
LIG1-205ENST00000593425 HLA-DOBP13765 273 aa14.1□□□□□ -0.15
LIG1-205ENST00000593425 IFNGR1P15260 489 aa14.1□□□□□ -0.15
LIG1-205ENST00000593425 SRP14P37108 136 aaKnown RBP14.1□□□□□ -0.15
LIG1-205ENST00000593425 IL1RL1Q01638 556 aa14.1□□□□□ -0.15
LIG1-205ENST00000593425 RGNQ15493 299 aa14.1□□□□□ -0.15
LIG1-205ENST00000593425 HHATQ5VTY9 493 aa14.1□□□□□ -0.15
LIG1-205ENST00000593425 CARD17Q5XLA6 110 aa14.1□□□□□ -0.15
LIG1-205ENST00000593425 RINLQ6ZS11 566 aa14.1□□□□□ -0.15
LIG1-205ENST00000593425 MSANTD1Q6ZTZ1 278 aa14.1□□□□□ -0.15
LIG1-205ENST00000593425 WDFY1Q8IWB7 410 aa14.1□□□□□ -0.15
LIG1-205ENST00000593425 PIK3C3Q8NEB9 887 aa14.1□□□□□ -0.15
LIG1-205ENST00000593425 BBS10Q8TAM1 723 aa14.1□□□□□ -0.15
LIG1-205ENST00000593425 SLC38A4Q969I6 547 aa14.1□□□□□ -0.15
LIG1-205ENST00000593425 EMC6Q9BV81 110 aa14.1□□□□□ -0.15
LIG1-205ENST00000593425 MRPL37Q9BZE1 423 aaKnown RBP14.1□□□□□ -0.15
LIG1-205ENST00000593425 PAIP1Q9H074 479 aaKnown RBP14.1□□□□□ -0.15
LIG1-205ENST00000593425 C12orf10Q9HB07 376 aa14.1□□□□□ -0.15
LIG1-205ENST00000593425 A4GALTQ9NPC4 353 aa14.1□□□□□ -0.15
LIG1-205ENST00000593425 SDR39U1Q9NRG7 319 aaPredicted RBP14.1□□□□□ -0.15
LIG1-205ENST00000593425 THAP1Q9NVV9 213 aa14.1□□□□□ -0.15
LIG1-205ENST00000593425 B3GNT2Q9NY97 397 aa14.1□□□□□ -0.15
LIG1-205ENST00000593425 RPS6KB2Q9UBS0 482 aa14.1□□□□□ -0.15
LIG1-205ENST00000593425 PCDHB14Q9Y5E9 798 aa14.1□□□□□ -0.15
LIG1-205ENST00000593425 A0A1B0GWA3 101 aa14.09□□□□□ -0.15
LIG1-205ENST00000593425 MS4A18H0YCH9 400 aa14.09□□□□□ -0.15
LIG1-205ENST00000593425 AKAP8O43823 692 aaKnown RBP14.09□□□□□ -0.15
LIG1-205ENST00000593425 OR2T1O43869 369 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms