RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 CARD17Q5XLA6 110 aa10.6□□□□□ -0.71
TPM4-212ENST00000590180 SLC22A25Q6T423 547 aa10.6□□□□□ -0.71
TPM4-212ENST00000590180 SEZ6L2Q6UXD5 910 aa10.6□□□□□ -0.71
TPM4-212ENST00000590180 TMEM108Q6UXF1 575 aa10.6□□□□□ -0.71
TPM4-212ENST00000590180 LINC00114Q6XXX2 140 aa10.6□□□□□ -0.71
TPM4-212ENST00000590180 DEF8Q6ZN54 512 aa10.6□□□□□ -0.71
TPM4-212ENST00000590180 HIST3H2AQ7L7L0 130 aa10.6□□□□□ -0.71
TPM4-212ENST00000590180 LRRC75A-AS1Q8N1F1 130 aa10.6□□□□□ -0.71
TPM4-212ENST00000590180 DEPDC4Q8N2C3 294 aa10.6□□□□□ -0.71
TPM4-212ENST00000590180 GPR137CQ8N3F9 429 aa10.6□□□□□ -0.71
TPM4-212ENST00000590180 SCAIQ8N9R8 606 aa10.6□□□□□ -0.71
TPM4-212ENST00000590180 C1orf162Q8NEQ5 155 aaPredicted RBP10.6□□□□□ -0.71
TPM4-212ENST00000590180 KBTBD8Q8NFY9 601 aa10.6□□□□□ -0.71
TPM4-212ENST00000590180 SMAP2Q8WU79 429 aaPredicted RBP10.6□□□□□ -0.71
TPM4-212ENST00000590180 HIST1H2ACQ93077 130 aa10.6□□□□□ -0.71
TPM4-212ENST00000590180 FBXW5Q969U6 566 aa10.6□□□□□ -0.71
TPM4-212ENST00000590180 CMTM5Q96DZ9 223 aa10.6□□□□□ -0.71
TPM4-212ENST00000590180 SLC41A3Q96GZ6 507 aa10.6□□□□□ -0.71
TPM4-212ENST00000590180 TXNDC15Q96J42 360 aa10.6□□□□□ -0.71
TPM4-212ENST00000590180 MPP4Q96JB8 637 aa10.6□□□□□ -0.71
TPM4-212ENST00000590180 CXorf56Q9H5V9 222 aa10.6□□□□□ -0.71
TPM4-212ENST00000590180 MRPL39Q9NYK5 338 aaKnown RBP10.6□□□□□ -0.71
TPM4-212ENST00000590180 GMPR2Q9P2T1 348 aaKnown RBP10.6□□□□□ -0.71
TPM4-212ENST00000590180 B3GAT1Q9P2W7 334 aa10.6□□□□□ -0.71
TPM4-212ENST00000590180 POU2F3Q9UKI9 436 aa10.6□□□□□ -0.71
TPM4-212ENST00000590180 MGAT4BQ9UQ53 548 aa10.6□□□□□ -0.71
TPM4-212ENST00000590180 AMDHD2Q9Y303 409 aa10.6□□□□□ -0.71
TPM4-212ENST00000590180 A0A096LPE4 126 aa10.59□□□□□ -0.71
TPM4-212ENST00000590180 A0A1W2PPZ6 126 aa10.59□□□□□ -0.71
TPM4-212ENST00000590180 C11orf98E9PRG8 122 aa10.59□□□□□ -0.71
TPM4-212ENST00000590180 PLPP3O14495 311 aa10.59□□□□□ -0.71
TPM4-212ENST00000590180 ZNF432O94892 652 aa10.59□□□□□ -0.71
TPM4-212ENST00000590180 LYPD3O95274 346 aa10.59□□□□□ -0.71
TPM4-212ENST00000590180 HPRP00739 348 aa10.59□□□□□ -0.71
TPM4-212ENST00000590180 MT-ATP6P00846 226 aa10.59□□□□□ -0.71
TPM4-212ENST00000590180 THY1P04216 161 aa10.59□□□□□ -0.71
TPM4-212ENST00000590180 ADORA3P0DMS8 318 aa10.59□□□□□ -0.71
TPM4-212ENST00000590180 UMPSP11172 480 aa10.59□□□□□ -0.71
TPM4-212ENST00000590180 HLA-DOBP13765 273 aa10.59□□□□□ -0.71
TPM4-212ENST00000590180 DRD4P21917 467 aa10.59□□□□□ -0.71
TPM4-212ENST00000590180 CD40P25942 277 aa10.59□□□□□ -0.71
TPM4-212ENST00000590180 LSP1P33241 339 aa10.59□□□□□ -0.71
TPM4-212ENST00000590180 NUDT2P50583 147 aa10.59□□□□□ -0.71
TPM4-212ENST00000590180 SLC7A2P52569 658 aa10.59□□□□□ -0.71
TPM4-212ENST00000590180 UBE2NP61088 152 aaKnown RBP10.59□□□□□ -0.71
TPM4-212ENST00000590180 SELENOWP63302 87 aa10.59□□□□□ -0.71
TPM4-212ENST00000590180 ARF1P84077 181 aaKnown RBP10.59□□□□□ -0.71
TPM4-212ENST00000590180 ROR2Q01974 943 aaKnown RBP10.59□□□□□ -0.71
TPM4-212ENST00000590180 PUDPQ08623 228 aa10.59□□□□□ -0.71
TPM4-212ENST00000590180 PIN1Q13526 163 aaPredicted RBP10.59□□□□□ -0.71
TPM4-212ENST00000590180 WDR88Q6ZMY6 472 aa10.59□□□□□ -0.71
TPM4-212ENST00000590180 TSPYL5Q86VY4 417 aaPredicted RBP10.59□□□□□ -0.71
TPM4-212ENST00000590180 C17orf78Q8N4C9 275 aa10.59□□□□□ -0.71
TPM4-212ENST00000590180 ADPRHL1Q8NDY3 354 aa10.59□□□□□ -0.71
TPM4-212ENST00000590180 OR1K1Q8NGR3 316 aa10.59□□□□□ -0.71
TPM4-212ENST00000590180 OR5J2Q8NH18 312 aa10.59□□□□□ -0.71
TPM4-212ENST00000590180 LZICQ8WZA0 190 aa10.59□□□□□ -0.71
TPM4-212ENST00000590180 GTPBP3Q969Y2 492 aaKnown RBP10.59□□□□□ -0.71
TPM4-212ENST00000590180 RADILQ96JH8 1075 aa10.59□□□□□ -0.71
TPM4-212ENST00000590180 ALKBH3Q96Q83 286 aaPredicted RBP10.59□□□□□ -0.71
TPM4-212ENST00000590180 EMC6Q9BV81 110 aa10.59□□□□□ -0.71
TPM4-212ENST00000590180 LINC00470Q9BZP3 86 aa10.59□□□□□ -0.71
TPM4-212ENST00000590180 AMBRA1Q9C0C7 1298 aa10.59□□□□□ -0.71
TPM4-212ENST00000590180 NANSQ9NR45 359 aa10.59□□□□□ -0.71
TPM4-212ENST00000590180 RIMS3Q9UJD0 308 aa10.59□□□□□ -0.71
TPM4-212ENST00000590180 RCE1Q9Y256 329 aa10.59□□□□□ -0.71
TPM4-212ENST00000590180 NOX1Q9Y5S8 564 aa10.59□□□□□ -0.71
TPM4-212ENST00000590180 MAGED1Q9Y5V3 778 aaPredicted RBP10.59□□□□□ -0.71
TPM4-212ENST00000590180 ATP23Q9Y6H3 246 aa10.59□□□□□ -0.71
TPM4-212ENST00000590180 AKAP9Q99996 3911 aa10.59□□□□□ -0.71
TPM4-212ENST00000590180 SLC35F4A4IF30 521 aa10.58□□□□□ -0.72
TPM4-212ENST00000590180 SHISA9B4DS77 424 aa10.58□□□□□ -0.72
TPM4-212ENST00000590180 M0R3G1 203 aa10.58□□□□□ -0.72
TPM4-212ENST00000590180 NDUFAB1O14561 156 aa10.58□□□□□ -0.72
TPM4-212ENST00000590180 TRAF3IP2O43734 574 aaPredicted RBP10.58□□□□□ -0.72
TPM4-212ENST00000590180 SNX3O60493 162 aa10.58□□□□□ -0.72
TPM4-212ENST00000590180 FZD7O75084 574 aa10.58□□□□□ -0.72
TPM4-212ENST00000590180 SOD3P08294 240 aa10.58□□□□□ -0.72
TPM4-212ENST00000590180 IFNA8P32881 189 aa10.58□□□□□ -0.72
TPM4-212ENST00000590180 PTH2RP49190 550 aa10.58□□□□□ -0.72
TPM4-212ENST00000590180 CDH11P55287 796 aa10.58□□□□□ -0.72
TPM4-212ENST00000590180 ATP5J2P56134 94 aa10.58□□□□□ -0.72
TPM4-212ENST00000590180 PSME3P61289 254 aa10.58□□□□□ -0.72
TPM4-212ENST00000590180 RPS4XP62701 263 aaKnown RBP10.58□□□□□ -0.72
TPM4-212ENST00000590180 POU3F1Q03052 451 aaPredicted RBP10.58□□□□□ -0.72
TPM4-212ENST00000590180 CAMK2DQ13557 499 aa10.58□□□□□ -0.72
TPM4-212ENST00000590180 ZNF74Q16587 644 aa10.58□□□□□ -0.72
TPM4-212ENST00000590180 TBRG1Q3YBR2 411 aa10.58□□□□□ -0.72
TPM4-212ENST00000590180 Q5PR19 223 aa10.58□□□□□ -0.72
TPM4-212ENST00000590180 LINGO2Q7L985 606 aa10.58□□□□□ -0.72
TPM4-212ENST00000590180 YTHDF3Q7Z739 585 aaKnown RBP10.58□□□□□ -0.72
TPM4-212ENST00000590180 PXKQ7Z7A4 578 aa10.58□□□□□ -0.72
TPM4-212ENST00000590180 NKAIN4Q8IVV8 208 aa10.58□□□□□ -0.72
TPM4-212ENST00000590180 LRRC17Q8N6Y2 441 aa10.58□□□□□ -0.72
TPM4-212ENST00000590180 PIK3C3Q8NEB9 887 aa10.58□□□□□ -0.72
TPM4-212ENST00000590180 OR6N1Q8NGY5 312 aa10.58□□□□□ -0.72
TPM4-212ENST00000590180 BCL2L2Q92843 193 aaPredicted RBP10.58□□□□□ -0.72
TPM4-212ENST00000590180 OR2M2Q96R28 347 aa10.58□□□□□ -0.72
TPM4-212ENST00000590180 PCDHAC1Q9H158 963 aa10.58□□□□□ -0.72
TPM4-212ENST00000590180 MYLK2Q9H1R3 596 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms