RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 PEG10Q86TG7 708 aaKnown RBP13.35□□□□□ -0.27
RETREG3-208ENST00000589797 OR5D18Q8NGL1 313 aa13.35□□□□□ -0.27
RETREG3-208ENST00000589797 PCNPQ8WW12 178 aaKnown RBP13.35□□□□□ -0.27
RETREG3-208ENST00000589797 SLC25A44Q96H78 314 aaPredicted RBP13.35□□□□□ -0.27
RETREG3-208ENST00000589797 NOP16Q9Y3C1 178 aaKnown RBP13.35□□□□□ -0.27
RETREG3-208ENST00000589797 V9GY05 133 aa13.35□□□□□ -0.27
RETREG3-208ENST00000589797 LAIR2Q6ISS4 152 aa13.34□□□□□ -0.27
RETREG3-208ENST00000589797 METAP1DQ6UB28 335 aaPredicted RBP13.34□□□□□ -0.27
RETREG3-208ENST00000589797 AGBL5Q8NDL9 886 aa13.34□□□□□ -0.27
RETREG3-208ENST00000589797 NT5CQ8TCD5 201 aa13.34□□□□□ -0.27
RETREG3-208ENST00000589797 FCRL1Q96LA6 429 aa13.34□□□□□ -0.27
RETREG3-208ENST00000589797 DUSP23Q9BVJ7 150 aa13.34□□□□□ -0.27
RETREG3-208ENST00000589797 IL20Q9NYY1 176 aa13.34□□□□□ -0.27
RETREG3-208ENST00000589797 KLHL13Q9P2N7 655 aa13.34□□□□□ -0.27
RETREG3-208ENST00000589797 RCE1Q9Y256 329 aa13.34□□□□□ -0.27
RETREG3-208ENST00000589797 LRRC37A2A6NM11 1700 aa13.34□□□□□ -0.27
RETREG3-208ENST00000589797 NSG1A0A0A6YYJ2 146 aa13.34□□□□□ -0.27
RETREG3-208ENST00000589797 A0A1B0GTH9 108 aa13.34□□□□□ -0.27
RETREG3-208ENST00000589797 CSTBP04080 98 aaKnown RBP13.34□□□□□ -0.27
RETREG3-208ENST00000589797 P04436 131 aa13.34□□□□□ -0.27
RETREG3-208ENST00000589797 H2AFB2P0C5Z0 115 aa13.34□□□□□ -0.27
RETREG3-208ENST00000589797 OR2T7P0C7T2 308 aa13.34□□□□□ -0.27
RETREG3-208ENST00000589797 LIMS3P0CW19 117 aa13.34□□□□□ -0.27
RETREG3-208ENST00000589797 LIMS4P0CW20 117 aa13.34□□□□□ -0.27
RETREG3-208ENST00000589797 FRKP42685 505 aaPredicted RBP13.34□□□□□ -0.27
RETREG3-208ENST00000589797 STARP49675 285 aa13.34□□□□□ -0.27
RETREG3-208ENST00000589797 ZNF628Q5EBL2 1059 aa13.34□□□□□ -0.27
RETREG3-208ENST00000589797 SLITRK4Q8IW52 837 aa13.34□□□□□ -0.27
RETREG3-208ENST00000589797 PLPP7Q8NBV4 271 aa13.34□□□□□ -0.27
RETREG3-208ENST00000589797 OR4M1Q8NGD0 313 aa13.34□□□□□ -0.27
RETREG3-208ENST00000589797 OR2T27Q8NH04 317 aa13.34□□□□□ -0.27
RETREG3-208ENST00000589797 REV1Q9UBZ9 1251 aa13.34□□□□□ -0.27
RETREG3-208ENST00000589797 OSGIN1Q9UJX0 560 aa13.34□□□□□ -0.27
RETREG3-208ENST00000589797 HTTP42858 3142 aa13.34□□□□□ -0.27
RETREG3-208ENST00000589797 MEN1O00255 615 aa13.34□□□□□ -0.27
RETREG3-208ENST00000589797 SYT7O43581 403 aa13.34□□□□□ -0.27
RETREG3-208ENST00000589797 IGHV3-9P01782 118 aa13.34□□□□□ -0.27
RETREG3-208ENST00000589797 MAGEA8P43361 318 aa13.34□□□□□ -0.27
RETREG3-208ENST00000589797 BIDP55957 195 aa13.34□□□□□ -0.27
RETREG3-208ENST00000589797 PSMA6P60900 246 aaKnown RBP13.34□□□□□ -0.27
RETREG3-208ENST00000589797 PSG6Q00889 435 aa13.34□□□□□ -0.27
RETREG3-208ENST00000589797 RPL18Q07020 188 aaKnown RBP13.34□□□□□ -0.27
RETREG3-208ENST00000589797 FXNQ16595 210 aa13.34□□□□□ -0.27
RETREG3-208ENST00000589797 YOD1Q5VVQ6 348 aaPredicted RBP13.34□□□□□ -0.27
RETREG3-208ENST00000589797 ABI3BPQ7Z7G0 1075 aa13.34□□□□□ -0.27
RETREG3-208ENST00000589797 COMTD1Q86VU5 262 aa13.34□□□□□ -0.27
RETREG3-208ENST00000589797 ALDH16A1Q8IZ83 802 aa13.34□□□□□ -0.27
RETREG3-208ENST00000589797 OR1L3Q8NH93 324 aa13.34□□□□□ -0.27
RETREG3-208ENST00000589797 KTI12Q96EK9 354 aaPredicted RBP13.34□□□□□ -0.27
RETREG3-208ENST00000589797 CCDC86Q9H6F5 360 aaKnown RBP13.34□□□□□ -0.27
RETREG3-208ENST00000589797 MED17Q9NVC6 651 aa13.34□□□□□ -0.27
RETREG3-208ENST00000589797 COA3Q9Y2R0 106 aaPredicted RBP13.34□□□□□ -0.27
RETREG3-208ENST00000589797 C5orf42Q9H799 3197 aa13.34□□□□□ -0.27
RETREG3-208ENST00000589797 E9PI62 339 aa13.33□□□□□ -0.27
RETREG3-208ENST00000589797 SSX4O60224 188 aa13.33□□□□□ -0.27
RETREG3-208ENST00000589797 ATP1B1P05026 303 aa13.33□□□□□ -0.27
RETREG3-208ENST00000589797 HLA-DMAP28067 261 aa13.33□□□□□ -0.27
RETREG3-208ENST00000589797 HTR2AP28223 471 aa13.33□□□□□ -0.27
RETREG3-208ENST00000589797 UGT2B10P36537 528 aa13.33□□□□□ -0.27
RETREG3-208ENST00000589797 FAM53BQ14153 422 aa13.33□□□□□ -0.27
RETREG3-208ENST00000589797 KCNJ8Q15842 424 aa13.33□□□□□ -0.27
RETREG3-208ENST00000589797 PCGF3Q3KNV8 242 aa13.33□□□□□ -0.27
RETREG3-208ENST00000589797 CDNFQ49AH0 187 aa13.33□□□□□ -0.27
RETREG3-208ENST00000589797 SPEM1Q8N4L4 309 aa13.33□□□□□ -0.27
RETREG3-208ENST00000589797 OR14A16Q8NHC5 309 aa13.33□□□□□ -0.27
RETREG3-208ENST00000589797 SLC35B4Q969S0 331 aa13.33□□□□□ -0.27
RETREG3-208ENST00000589797 EMC9Q9Y3B6 208 aa13.33□□□□□ -0.27
RETREG3-208ENST00000589797 LINC00271P0C7V0 271 aa13.33□□□□□ -0.28
RETREG3-208ENST00000589797 PTHLHP12272 177 aa13.33□□□□□ -0.28
RETREG3-208ENST00000589797 NCCRP1Q6ZVX7 275 aaPredicted RBP13.33□□□□□ -0.28
RETREG3-208ENST00000589797 VASH1Q7L8A9 365 aaPredicted RBP13.33□□□□□ -0.28
RETREG3-208ENST00000589797 ABHD12BQ7Z5M8 362 aaPredicted RBP13.33□□□□□ -0.28
RETREG3-208ENST00000589797 OR51D1Q8NGF3 324 aa13.33□□□□□ -0.28
RETREG3-208ENST00000589797 ACOT12Q8WYK0 555 aa13.33□□□□□ -0.28
RETREG3-208ENST00000589797 DDIT4LQ96D03 193 aa13.33□□□□□ -0.28
RETREG3-208ENST00000589797 SFXN2Q96NB2 322 aa13.33□□□□□ -0.28
RETREG3-208ENST00000589797 A0A087WV62 115 aa13.33□□□□□ -0.28
RETREG3-208ENST00000589797 A0A1W2PQ72 361 aa13.33□□□□□ -0.28
RETREG3-208ENST00000589797 TMEM129A0AVI4 362 aa13.33□□□□□ -0.28
RETREG3-208ENST00000589797 NPIPB8E9PQR5 432 aa13.33□□□□□ -0.28
RETREG3-208ENST00000589797 OR7A10O76100 309 aa13.33□□□□□ -0.28
RETREG3-208ENST00000589797 CYB5AP00167 134 aa13.33□□□□□ -0.28
RETREG3-208ENST00000589797 IFNGR1P15260 489 aa13.33□□□□□ -0.28
RETREG3-208ENST00000589797 GLB1P16278 677 aa13.33□□□□□ -0.28
RETREG3-208ENST00000589797 SPI1P17947 270 aa13.33□□□□□ -0.28
RETREG3-208ENST00000589797 RFC3P40938 356 aa13.33□□□□□ -0.28
RETREG3-208ENST00000589797 CCR6P51684 374 aa13.33□□□□□ -0.28
RETREG3-208ENST00000589797 EMP3P54852 163 aa13.33□□□□□ -0.28
RETREG3-208ENST00000589797 EEF1A1P68104 462 aaKnown RBP13.33□□□□□ -0.28
RETREG3-208ENST00000589797 RASGEF1BQ0VAM2 473 aa13.33□□□□□ -0.28
RETREG3-208ENST00000589797 MLC1Q15049 377 aa13.33□□□□□ -0.28
RETREG3-208ENST00000589797 TRAM1Q15629 374 aa13.33□□□□□ -0.28
RETREG3-208ENST00000589797 AGAP6Q5VW22 663 aa13.33□□□□□ -0.28
RETREG3-208ENST00000589797 C12orf73Q69YU5 71 aa13.33□□□□□ -0.28
RETREG3-208ENST00000589797 NDUFAF7Q7L592 441 aa13.33□□□□□ -0.28
RETREG3-208ENST00000589797 AKAP1Q92667 903 aaKnown RBP eCLIP13.33□□□□□ -0.281e-7■■■■□ 25.6
RETREG3-208ENST00000589797 SLC25A46Q96AG3 418 aa13.33□□□□□ -0.28
RETREG3-208ENST00000589797 CCDC120Q96HB5 630 aa13.33□□□□□ -0.28
RETREG3-208ENST00000589797 AGAP4Q96P64 663 aa13.33□□□□□ -0.28
RETREG3-208ENST00000589797 TTYH1Q9H313 450 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms