RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 C3orf36Q3SXR2 165 aa12.54□□□□□ -0.4
MBD1-220ENST00000589758 TBRG1Q3YBR2 411 aa12.54□□□□□ -0.4
MBD1-220ENST00000589758 HIKESHIQ53FT3 197 aa12.54□□□□□ -0.4
MBD1-220ENST00000589758 FAM69AQ5T7M9 428 aa12.54□□□□□ -0.4
MBD1-220ENST00000589758 HMBOX1Q6NT76 420 aa12.54□□□□□ -0.4
MBD1-220ENST00000589758 ANKRD16Q6P6B7 361 aa12.54□□□□□ -0.4
MBD1-220ENST00000589758 DHRS4L2Q6PKH6 230 aa12.54□□□□□ -0.4
MBD1-220ENST00000589758 NET1Q7Z628 596 aaPredicted RBP12.54□□□□□ -0.4
MBD1-220ENST00000589758 LSRQ86X29 649 aaPredicted RBP12.54□□□□□ -0.4
MBD1-220ENST00000589758 PTOV1Q86YD1 416 aa12.54□□□□□ -0.4
MBD1-220ENST00000589758 C11orf65Q8NCR3 313 aa12.54□□□□□ -0.4
MBD1-220ENST00000589758 ANKK1Q8NFD2 765 aa12.54□□□□□ -0.4
MBD1-220ENST00000589758 BHLHE22Q8NFJ8 381 aaPredicted RBP12.54□□□□□ -0.4
MBD1-220ENST00000589758 SLC38A4Q969I6 547 aa12.54□□□□□ -0.4
MBD1-220ENST00000589758 OXGR1Q96P68 337 aa12.54□□□□□ -0.4
MBD1-220ENST00000589758 CCT8L2Q96SF2 557 aa12.54□□□□□ -0.4
MBD1-220ENST00000589758 ECSITQ9BQ95 431 aa12.54□□□□□ -0.4
MBD1-220ENST00000589758 PTDSS2Q9BVG9 487 aa12.54□□□□□ -0.4
MBD1-220ENST00000589758 KAT8Q9H7Z6 458 aaKnown RBP12.54□□□□□ -0.4
MBD1-220ENST00000589758 EVA1AQ9H8M9 152 aa12.54□□□□□ -0.4
MBD1-220ENST00000589758 MOKQ9UQ07 419 aa12.54□□□□□ -0.4
MBD1-220ENST00000589758 RCE1Q9Y256 329 aa12.54□□□□□ -0.4
MBD1-220ENST00000589758 ANGPT4Q9Y264 503 aa12.54□□□□□ -0.4
MBD1-220ENST00000589758 IGHV4-30-2A0A087WSY4 118 aa12.53□□□□□ -0.4
MBD1-220ENST00000589758 PRORSD1PA6NEY8 169 aa12.53□□□□□ -0.4
MBD1-220ENST00000589758 ATP6V1G2-DDX39BF2Z307 99 aa12.53□□□□□ -0.4
MBD1-220ENST00000589758 AKAP8O43823 692 aaKnown RBP12.53□□□□□ -0.4
MBD1-220ENST00000589758 SLC43A1O75387 559 aa12.53□□□□□ -0.4
MBD1-220ENST00000589758 SERPINB7O75635 380 aa12.53□□□□□ -0.4
MBD1-220ENST00000589758 LGI1O95970 557 aa12.53□□□□□ -0.4
MBD1-220ENST00000589758 NPPAP01160 153 aa12.53□□□□□ -0.4
MBD1-220ENST00000589758 CRYAAP02489 173 aa12.53□□□□□ -0.4
MBD1-220ENST00000589758 CSF3P09919 207 aa12.53□□□□□ -0.4
MBD1-220ENST00000589758 EFNA4P52798 201 aa12.53□□□□□ -0.4
MBD1-220ENST00000589758 CLDN17P56750 224 aa12.53□□□□□ -0.4
MBD1-220ENST00000589758 NCALDP61601 193 aa12.53□□□□□ -0.4
MBD1-220ENST00000589758 HOXC5Q00444 222 aa12.53□□□□□ -0.4
MBD1-220ENST00000589758 C1DQ13901 141 aaKnown RBP12.53□□□□□ -0.4
MBD1-220ENST00000589758 MFSD13AQ14CX5 517 aa12.53□□□□□ -0.4
MBD1-220ENST00000589758 ALG10BQ5I7T1 473 aa12.53□□□□□ -0.4
MBD1-220ENST00000589758 FAM91A1Q658Y4 838 aa12.53□□□□□ -0.4
MBD1-220ENST00000589758 ULK3Q6PHR2 472 aa12.53□□□□□ -0.4
MBD1-220ENST00000589758 KDM8Q8N371 416 aa12.53□□□□□ -0.4
MBD1-220ENST00000589758 FAM169BQ8N8A8 192 aa12.53□□□□□ -0.4
MBD1-220ENST00000589758 HIPK4Q8NE63 616 aa12.53□□□□□ -0.4
MBD1-220ENST00000589758 BCL2L2Q92843 193 aaPredicted RBP12.53□□□□□ -0.4
MBD1-220ENST00000589758 KTI12Q96EK9 354 aaPredicted RBP12.53□□□□□ -0.4
MBD1-220ENST00000589758 SLC47A1Q96FL8 570 aa12.53□□□□□ -0.4
MBD1-220ENST00000589758 ALKBH3Q96Q83 286 aaPredicted RBP12.53□□□□□ -0.4
MBD1-220ENST00000589758 SLC38A2Q96QD8 506 aa12.53□□□□□ -0.4
MBD1-220ENST00000589758 ZNF607Q96SK3 696 aa12.53□□□□□ -0.4
MBD1-220ENST00000589758 SH3GL1Q99961 368 aa12.53□□□□□ -0.4
MBD1-220ENST00000589758 KATNB1Q9BVA0 655 aa12.53□□□□□ -0.4
MBD1-220ENST00000589758 YAE1D1Q9NRH1 226 aa12.53□□□□□ -0.4
MBD1-220ENST00000589758 SELENONQ9NZV5 590 aa12.53□□□□□ -0.4
MBD1-220ENST00000589758 TESQ9UGI8 421 aaKnown RBP12.53□□□□□ -0.4
MBD1-220ENST00000589758 ADAM21Q9UKJ8 722 aa12.53□□□□□ -0.4
MBD1-220ENST00000589758 CHD3Q12873 2000 aaKnown RBP12.52□□□□□ -0.4
MBD1-220ENST00000589758 TRAV36DV7A0A075B6V5 113 aa12.52□□□□□ -0.41
MBD1-220ENST00000589758 IGHV1-18A0A0C4DH31 117 aa12.52□□□□□ -0.41
MBD1-220ENST00000589758 LOC102725191A0A1B0GVB3 256 aa12.52□□□□□ -0.41
MBD1-220ENST00000589758 A0A1B0GWA3 101 aa12.52□□□□□ -0.41
MBD1-220ENST00000589758 RPL36A-HNRNPH2H7BZ11 118 aa12.52□□□□□ -0.41
MBD1-220ENST00000589758 UPK3AO75631 287 aa12.52□□□□□ -0.41
MBD1-220ENST00000589758 OPN1SWP03999 348 aa12.52□□□□□ -0.41
MBD1-220ENST00000589758 NUDT2P50583 147 aa12.52□□□□□ -0.41
MBD1-220ENST00000589758 GZMMP51124 257 aa12.52□□□□□ -0.41
MBD1-220ENST00000589758 ROR2Q01974 943 aaKnown RBP12.52□□□□□ -0.41
MBD1-220ENST00000589758 LGALS3BPQ08380 585 aa12.52□□□□□ -0.41
MBD1-220ENST00000589758 LOXL1Q08397 574 aaPredicted RBP12.52□□□□□ -0.41
MBD1-220ENST00000589758 SWI5Q1ZZU3 235 aa12.52□□□□□ -0.41
MBD1-220ENST00000589758 GPR137CQ8N3F9 429 aa12.52□□□□□ -0.41
MBD1-220ENST00000589758 OR8J3Q8NGG0 315 aa12.52□□□□□ -0.41
MBD1-220ENST00000589758 OR6S1Q8NH40 331 aa12.52□□□□□ -0.41
MBD1-220ENST00000589758 FAM168AQ92567 244 aa12.52□□□□□ -0.41
MBD1-220ENST00000589758 PROX1Q92786 737 aa12.52□□□□□ -0.41
MBD1-220ENST00000589758 CMTM5Q96DZ9 223 aa12.52□□□□□ -0.41
MBD1-220ENST00000589758 TNFRSF13CQ96RJ3 184 aa12.52□□□□□ -0.41
MBD1-220ENST00000589758 EPYCQ99645 322 aa12.52□□□□□ -0.41
MBD1-220ENST00000589758 EFCAB1Q9HAE3 211 aa12.52□□□□□ -0.41
MBD1-220ENST00000589758 TMEM27Q9HBJ8 222 aa12.52□□□□□ -0.41
MBD1-220ENST00000589758 CRNNQ9UBG3 495 aaPredicted RBP12.52□□□□□ -0.41
MBD1-220ENST00000589758 SLC13A4Q9UKG4 626 aa12.52□□□□□ -0.41
MBD1-220ENST00000589758 USP22Q9UPT9 525 aa12.52□□□□□ -0.41
MBD1-220ENST00000589758 A0A087WUJ7 227 aa12.51□□□□□ -0.41
MBD1-220ENST00000589758 A0A096LNT2 108 aa12.51□□□□□ -0.41
MBD1-220ENST00000589758 A8MV72 311 aaPredicted RBP12.51□□□□□ -0.41
MBD1-220ENST00000589758 M0R082 166 aa12.51□□□□□ -0.41
MBD1-220ENST00000589758 TPST1O60507 370 aa12.51□□□□□ -0.41
MBD1-220ENST00000589758 DCTN3O75935 186 aa12.51□□□□□ -0.41
MBD1-220ENST00000589758 PDE5AO76074 875 aa12.51□□□□□ -0.41
MBD1-220ENST00000589758 ZNF432O94892 652 aa12.51□□□□□ -0.41
MBD1-220ENST00000589758 FAM107AO95990 144 aa12.51□□□□□ -0.41
MBD1-220ENST00000589758 F12P00748 615 aaPredicted RBP12.51□□□□□ -0.41
MBD1-220ENST00000589758 HTR2AP28223 471 aa12.51□□□□□ -0.41
MBD1-220ENST00000589758 RBBP4Q09028 425 aa12.51□□□□□ -0.41
MBD1-220ENST00000589758 VMACQ2NL98 169 aa12.51□□□□□ -0.41
MBD1-220ENST00000589758 GLIPR1L2Q4G1C9 344 aa12.51□□□□□ -0.41
MBD1-220ENST00000589758 GKAP1Q5VSY0 366 aaPredicted RBP12.51□□□□□ -0.41
MBD1-220ENST00000589758 H1FNTQ75WM6 255 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms