RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 SF3A3Q12874 501 aaKnown RBP eCLIP7.28□□□□□ -1.245e-6■■■■□ 24.7
DNMT1-219ENST00000589349 LIN52Q52LA3 116 aa7.28□□□□□ -1.24
DNMT1-219ENST00000589349 AGKQ53H12 422 aa7.28□□□□□ -1.24
DNMT1-219ENST00000589349 MRPL2Q5T653 305 aaKnown RBP7.28□□□□□ -1.24
DNMT1-219ENST00000589349 SLC2A7Q6PXP3 512 aa7.28□□□□□ -1.24
DNMT1-219ENST00000589349 STAC2Q6ZMT1 411 aa7.28□□□□□ -1.24
DNMT1-219ENST00000589349 ZNF704Q6ZNC4 412 aaPredicted RBP7.28□□□□□ -1.24
DNMT1-219ENST00000589349 LRRC74BQ6ZQY2 392 aa7.28□□□□□ -1.24
DNMT1-219ENST00000589349 TMPPEQ6ZT21 453 aa7.28□□□□□ -1.24
DNMT1-219ENST00000589349 BHLHA15Q7RTS1 189 aaPredicted RBP7.28□□□□□ -1.24
DNMT1-219ENST00000589349 GPAT4Q86UL3 456 aa7.28□□□□□ -1.24
DNMT1-219ENST00000589349 ZBTB46Q86UZ6 589 aa7.28□□□□□ -1.24
DNMT1-219ENST00000589349 VRK2Q86Y07 508 aa7.28□□□□□ -1.24
DNMT1-219ENST00000589349 TGIF2LYQ8IUE0 185 aa7.28□□□□□ -1.24
DNMT1-219ENST00000589349 RNF128Q8TEB7 428 aa7.28□□□□□ -1.24
DNMT1-219ENST00000589349 AURKBQ96GD4 344 aaPredicted RBP7.28□□□□□ -1.24
DNMT1-219ENST00000589349 ZNF300Q96RE9 604 aaPredicted RBP7.28□□□□□ -1.24
DNMT1-219ENST00000589349 NAA11Q9BSU3 229 aaPredicted RBP7.28□□□□□ -1.24
DNMT1-219ENST00000589349 RAD21L1Q9H4I0 556 aa7.28□□□□□ -1.24
DNMT1-219ENST00000589349 PLEKHF2Q9H8W4 249 aa7.28□□□□□ -1.24
DNMT1-219ENST00000589349 TPT1P8Q9HAU6 139 aa7.28□□□□□ -1.24
DNMT1-219ENST00000589349 SLCO1B3Q9NPD5 702 aa7.28□□□□□ -1.24
DNMT1-219ENST00000589349 AKIP1Q9NQ31 210 aa7.28□□□□□ -1.24
DNMT1-219ENST00000589349 RLIMQ9NVW2 624 aa7.28□□□□□ -1.24
DNMT1-219ENST00000589349 SELENONQ9NZV5 590 aa7.28□□□□□ -1.24
DNMT1-219ENST00000589349 ZIM2Q9NZV7 527 aa7.28□□□□□ -1.24
DNMT1-219ENST00000589349 CCDC167Q9P0B6 97 aa7.28□□□□□ -1.24
DNMT1-219ENST00000589349 UPB1Q9UBR1 384 aa7.28□□□□□ -1.24
DNMT1-219ENST00000589349 RPS6KB2Q9UBS0 482 aa7.28□□□□□ -1.24
DNMT1-219ENST00000589349 POU2F3Q9UKI9 436 aa7.28□□□□□ -1.24
DNMT1-219ENST00000589349 TMED7Q9Y3B3 224 aa7.28□□□□□ -1.24
DNMT1-219ENST00000589349 AKAP6Q13023 2319 aa7.28□□□□□ -1.24
DNMT1-219ENST00000589349 CSMD1Q96PZ7 3565 aa7.27□□□□□ -1.25
DNMT1-219ENST00000589349 SPG11Q96JI7 2443 aa7.27□□□□□ -1.25
DNMT1-219ENST00000589349 APCP25054 2843 aa7.27□□□□□ -1.25
DNMT1-219ENST00000589349 AGAP5A6NIR3 686 aa7.27□□□□□ -1.25
DNMT1-219ENST00000589349 DEFB108AA8MXU0 73 aa7.27□□□□□ -1.25
DNMT1-219ENST00000589349 CLIC1O00299 241 aa7.27□□□□□ -1.25
DNMT1-219ENST00000589349 MRPL33O75394 65 aaKnown RBP7.27□□□□□ -1.25
DNMT1-219ENST00000589349 CCKARP32238 428 aa7.27□□□□□ -1.25
DNMT1-219ENST00000589349 CTXN1P60606 82 aa7.27□□□□□ -1.25
DNMT1-219ENST00000589349 SLC35A1P78382 337 aa7.27□□□□□ -1.25
DNMT1-219ENST00000589349 TXNL4AP83876 142 aaKnown RBP7.27□□□□□ -1.25
DNMT1-219ENST00000589349 FUT5Q11128 374 aa7.27□□□□□ -1.25
DNMT1-219ENST00000589349 FOXD4Q12950 439 aaPredicted RBP7.27□□□□□ -1.25
DNMT1-219ENST00000589349 ITGADQ13349 1161 aa7.27□□□□□ -1.25
DNMT1-219ENST00000589349 FHL2Q14192 279 aa7.27□□□□□ -1.25
DNMT1-219ENST00000589349 OR7A5Q15622 319 aa7.27□□□□□ -1.25
DNMT1-219ENST00000589349 GTDC1Q4AE62 458 aa7.27□□□□□ -1.25
DNMT1-219ENST00000589349 ZNF311Q5JNZ3 666 aa7.27□□□□□ -1.25
DNMT1-219ENST00000589349 Q5PR19 223 aa7.27□□□□□ -1.25
DNMT1-219ENST00000589349 C9orf135Q5VTT2 229 aa7.27□□□□□ -1.25
DNMT1-219ENST00000589349 TMEM225Q6GV28 225 aa7.27□□□□□ -1.25
DNMT1-219ENST00000589349 EPGNQ6UW88 154 aa7.27□□□□□ -1.25
DNMT1-219ENST00000589349 CASP12Q6UXS9 341 aa7.27□□□□□ -1.25
DNMT1-219ENST00000589349 TFAP2EQ6VUC0 442 aa7.27□□□□□ -1.25
DNMT1-219ENST00000589349 Q71RC1 249 aaPredicted RBP7.27□□□□□ -1.25
DNMT1-219ENST00000589349 RHOUQ7L0Q8 258 aa7.27□□□□□ -1.25
DNMT1-219ENST00000589349 MAVSQ7Z434 540 aa7.27□□□□□ -1.25
DNMT1-219ENST00000589349 ZNF440Q8IYI8 595 aa7.27□□□□□ -1.25
DNMT1-219ENST00000589349 PIGXQ8TBF5 258 aa7.27□□□□□ -1.25
DNMT1-219ENST00000589349 TMEM171Q8WVE6 324 aa7.27□□□□□ -1.25
DNMT1-219ENST00000589349 NEU4Q8WWR8 484 aaPredicted RBP7.27□□□□□ -1.25
DNMT1-219ENST00000589349 HSD17B8Q92506 261 aa7.27□□□□□ -1.25
DNMT1-219ENST00000589349 AKAP1Q92667 903 aaKnown RBP eCLIP7.27□□□□□ -1.25
DNMT1-219ENST00000589349 PMM1Q92871 262 aa7.27□□□□□ -1.25
DNMT1-219ENST00000589349 APH1AQ96BI3 265 aa7.27□□□□□ -1.25
DNMT1-219ENST00000589349 ZNF524Q96C55 264 aa7.27□□□□□ -1.25
DNMT1-219ENST00000589349 SLC25A36Q96CQ1 311 aa7.27□□□□□ -1.25
DNMT1-219ENST00000589349 SORCS2Q96PQ0 1159 aa7.27□□□□□ -1.25
DNMT1-219ENST00000589349 TAPBPLQ9BX59 468 aa7.27□□□□□ -1.25
DNMT1-219ENST00000589349 C11orf54Q9H0W9 315 aaPredicted RBP7.27□□□□□ -1.25
DNMT1-219ENST00000589349 ESRP2Q9H6T0 727 aaKnown RBP7.27□□□□□ -1.25
DNMT1-219ENST00000589349 COQ10BQ9H8M1 238 aa7.27□□□□□ -1.25
DNMT1-219ENST00000589349 BEX4Q9NWD9 120 aaPredicted RBP7.27□□□□□ -1.25
DNMT1-219ENST00000589349 ADPRHL2Q9NX46 363 aa7.27□□□□□ -1.25
DNMT1-219ENST00000589349 THUMPD1Q9NXG2 353 aaKnown RBP7.27□□□□□ -1.25
DNMT1-219ENST00000589349 TMEM181Q9P2C4 612 aa7.27□□□□□ -1.25
DNMT1-219ENST00000589349 SLC23A1Q9UHI7 598 aa7.27□□□□□ -1.25
DNMT1-219ENST00000589349 HDGFL3Q9Y3E1 203 aa7.27□□□□□ -1.25
DNMT1-219ENST00000589349 ADGRG4Q8IZF6 3080 aa7.27□□□□□ -1.25
DNMT1-219ENST00000589349 PRRC2AP48634 2157 aaKnown RBP7.26□□□□□ -1.25
DNMT1-219ENST00000589349 FBN2P35556 2912 aa7.26□□□□□ -1.25
DNMT1-219ENST00000589349 A0A1W2PPR1 153 aa7.26□□□□□ -1.25
DNMT1-219ENST00000589349 A0A1W2PR80 420 aa7.26□□□□□ -1.25
DNMT1-219ENST00000589349 TMEM72A0PK05 275 aa7.26□□□□□ -1.25
DNMT1-219ENST00000589349 EVPLLA8MZ36 301 aa7.26□□□□□ -1.25
DNMT1-219ENST00000589349 HMGB1P1B2RPK0 211 aaPredicted RBP7.26□□□□□ -1.25
DNMT1-219ENST00000589349 GPR171O14626 319 aa7.26□□□□□ -1.25
DNMT1-219ENST00000589349 KLF11O14901 512 aa7.26□□□□□ -1.25
DNMT1-219ENST00000589349 SMAD9O15198 467 aaKnown RBP7.26□□□□□ -1.25
DNMT1-219ENST00000589349 CYTIPO60759 359 aa7.26□□□□□ -1.25
DNMT1-219ENST00000589349 RAD51DO75771 328 aa7.26□□□□□ -1.25
DNMT1-219ENST00000589349 NCR1O76036 304 aa7.26□□□□□ -1.25
DNMT1-219ENST00000589349 ABHD16AO95870 558 aa7.26□□□□□ -1.25
DNMT1-219ENST00000589349 PLAUP00749 431 aa7.26□□□□□ -1.25
DNMT1-219ENST00000589349 CD53P19397 219 aa7.26□□□□□ -1.25
DNMT1-219ENST00000589349 GGT1P19440 569 aa7.26□□□□□ -1.25
DNMT1-219ENST00000589349 PSMB1P20618 241 aaKnown RBP7.26□□□□□ -1.25
DNMT1-219ENST00000589349 NR4A1P22736 598 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms