RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	PIP4P1	Q86T03	277 aa		14.02	□□□□□ -0.16
DDX39A-209	ENST00000589318	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	14.02	□□□□□ -0.16
DDX39A-209	ENST00000589318	OR2Y1	Q8NGV0	311 aa		14.02	□□□□□ -0.16
DDX39A-209	ENST00000589318	TEX47	Q8TBZ9	253 aa		14.02	□□□□□ -0.16
DDX39A-209	ENST00000589318	THAP3	Q8WTV1	239 aa	Predicted RBP	14.02	□□□□□ -0.16
DDX39A-209	ENST00000589318	C3orf49	Q96BT1	292 aa		14.02	□□□□□ -0.16
DDX39A-209	ENST00000589318	HS6ST2	Q96MM7	605 aa		14.02	□□□□□ -0.16
DDX39A-209	ENST00000589318	IL4I1	Q96RQ9	567 aa		14.02	□□□□□ -0.16
DDX39A-209	ENST00000589318	ABCB9	Q9NP78	766 aa		14.02	□□□□□ -0.16
DDX39A-209	ENST00000589318	SNTG1	Q9NSN8	517 aa		14.02	□□□□□ -0.16
DDX39A-209	ENST00000589318	NDUFB11	Q9NX14	153 aa		14.02	□□□□□ -0.16
DDX39A-209	ENST00000589318	ZNF224	Q9NZL3	707 aa		14.02	□□□□□ -0.16
DDX39A-209	ENST00000589318	UBQLN2	Q9UHD9	624 aa		14.02	□□□□□ -0.16
DDX39A-209	ENST00000589318	MED31	Q9Y3C7	131 aa		14.02	□□□□□ -0.16
DDX39A-209	ENST00000589318	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	14.02	□□□□□ -0.17
DDX39A-209	ENST00000589318	SLC30A4	O14863	429 aa		14.02	□□□□□ -0.17
DDX39A-209	ENST00000589318	PRKY	O43930	277 aa		14.02	□□□□□ -0.17
DDX39A-209	ENST00000589318	SLC2A2	P11168	524 aa	Predicted RBP	14.02	□□□□□ -0.17
DDX39A-209	ENST00000589318	F8A1	P23610	371 aa		14.02	□□□□□ -0.17
DDX39A-209	ENST00000589318	CRYBB2	P43320	205 aa		14.02	□□□□□ -0.17
DDX39A-209	ENST00000589318	CBX5	P45973	191 aa		14.02	□□□□□ -0.17
DDX39A-209	ENST00000589318	SMS	P52788	366 aa		14.02	□□□□□ -0.17
DDX39A-209	ENST00000589318	ZNF117	Q03924	483 aa		14.02	□□□□□ -0.17
DDX39A-209	ENST00000589318	CASP12	Q6UXS9	341 aa		14.02	□□□□□ -0.17
DDX39A-209	ENST00000589318	TIPARP	Q7Z3E1	657 aa	Known RBP	14.02	□□□□□ -0.17
DDX39A-209	ENST00000589318	MARCH3	Q86UD3	253 aa		14.02	□□□□□ -0.17
DDX39A-209	ENST00000589318	PM20D2	Q8IYS1	436 aa		14.02	□□□□□ -0.17
DDX39A-209	ENST00000589318	LRRC17	Q8N6Y2	441 aa		14.02	□□□□□ -0.17
DDX39A-209	ENST00000589318	TCEANC	Q8N8B7	351 aa		14.02	□□□□□ -0.17
DDX39A-209	ENST00000589318	OR8J1	Q8NGP2	316 aa		14.02	□□□□□ -0.17
DDX39A-209	ENST00000589318	BPIFA2	Q96DR5	249 aa		14.02	□□□□□ -0.17
DDX39A-209	ENST00000589318	SORCS2	Q96PQ0	1159 aa		14.02	□□□□□ -0.17
DDX39A-209	ENST00000589318	OR5M11	Q96RB7	305 aa		14.02	□□□□□ -0.17
DDX39A-209	ENST00000589318	TAAR9	Q96RI9	348 aa		14.02	□□□□□ -0.17
DDX39A-209	ENST00000589318	DDA1	Q9BW61	102 aa		14.02	□□□□□ -0.17
DDX39A-209	ENST00000589318	MND1	Q9BWT6	205 aa		14.02	□□□□□ -0.17
DDX39A-209	ENST00000589318	POLDIP3	Q9BY77	421 aa	Known RBP	14.02	□□□□□ -0.17
DDX39A-209	ENST00000589318	LAT2	Q9GZY6	243 aa		14.02	□□□□□ -0.17
DDX39A-209	ENST00000589318	HHATL	Q9HCP6	504 aa		14.02	□□□□□ -0.17
DDX39A-209	ENST00000589318	KRCC1	Q9NPI7	259 aa	Predicted RBP	14.02	□□□□□ -0.17
DDX39A-209	ENST00000589318	TVP23B	Q9NYZ1	205 aa		14.02	□□□□□ -0.17
DDX39A-209	ENST00000589318	PISD	Q9UG56	409 aa		14.02	□□□□□ -0.17
DDX39A-209	ENST00000589318	PCDHGA1	Q9Y5H4	931 aa		14.02	□□□□□ -0.17
DDX39A-209	ENST00000589318	HS3ST3B1	Q9Y662	390 aa		14.02	□□□□□ -0.17
DDX39A-209	ENST00000589318	CDH10	Q9Y6N8	788 aa		14.02	□□□□□ -0.17
DDX39A-209	ENST00000589318		A0A087WUJ7	227 aa		14.01	□□□□□ -0.17
DDX39A-209	ENST00000589318	IGHV1-45	A0A0A0MS14	117 aa		14.01	□□□□□ -0.17
DDX39A-209	ENST00000589318		A0A1W2PQL4	384 aa	Predicted RBP	14.01	□□□□□ -0.17
DDX39A-209	ENST00000589318	C9orf172	C9J069	976 aa		14.01	□□□□□ -0.17
DDX39A-209	ENST00000589318	WWP2	O00308	870 aa		14.01	□□□□□ -0.17
DDX39A-209	ENST00000589318	LYRM1	O43325	122 aa		14.01	□□□□□ -0.17
DDX39A-209	ENST00000589318	PPM1B	O75688	479 aa		14.01	□□□□□ -0.17
DDX39A-209	ENST00000589318	SCO1	O75880	301 aa		14.01	□□□□□ -0.17
DDX39A-209	ENST00000589318	MT-CO3	P00414	261 aa		14.01	□□□□□ -0.17
DDX39A-209	ENST00000589318	ZP3	P21754	424 aa		14.01	□□□□□ -0.17
DDX39A-209	ENST00000589318	EVI2B	P34910	448 aa		14.01	□□□□□ -0.17
DDX39A-209	ENST00000589318	NRG3	P56975	720 aa		14.01	□□□□□ -0.17
DDX39A-209	ENST00000589318	S100A12	P80511	92 aa		14.01	□□□□□ -0.17
DDX39A-209	ENST00000589318	MLLT11	Q13015	90 aa	Predicted RBP	14.01	□□□□□ -0.17
DDX39A-209	ENST00000589318	HSD17B12	Q53GQ0	312 aa		14.01	□□□□□ -0.17
DDX39A-209	ENST00000589318	SHE	Q5VZ18	495 aa		14.01	□□□□□ -0.17
DDX39A-209	ENST00000589318	SLC27A4	Q6P1M0	643 aa		14.01	□□□□□ -0.17
DDX39A-209	ENST00000589318	DHRS13	Q6UX07	377 aa		14.01	□□□□□ -0.17
DDX39A-209	ENST00000589318	SLC37A3	Q8NCC5	494 aa		14.01	□□□□□ -0.17
DDX39A-209	ENST00000589318	OR4Q3	Q8NH05	313 aa		14.01	□□□□□ -0.17
DDX39A-209	ENST00000589318	ELP5	Q8TE02	316 aa		14.01	□□□□□ -0.17
DDX39A-209	ENST00000589318	ZPBP	Q9BS86	351 aa		14.01	□□□□□ -0.17
DDX39A-209	ENST00000589318	SLC6A15	Q9H2J7	730 aa		14.01	□□□□□ -0.17
DDX39A-209	ENST00000589318	MIXL1	Q9H2W2	232 aa		14.01	□□□□□ -0.17
DDX39A-209	ENST00000589318	TMEM5	Q9Y2B1	443 aa		14.01	□□□□□ -0.17
DDX39A-209	ENST00000589318	EP300	Q09472	2414 aa	Predicted RBP	14.01	□□□□□ -0.17
DDX39A-209	ENST00000589318	UNC119B	A6NIH7	251 aa		14	□□□□□ -0.17
DDX39A-209	ENST00000589318	GTPBP1	O00178	669 aa	Known RBP	14	□□□□□ -0.17
DDX39A-209	ENST00000589318	TSPAN4	O14817	238 aa		14	□□□□□ -0.17
DDX39A-209	ENST00000589318	ENTPD6	O75354	484 aa		14	□□□□□ -0.17
DDX39A-209	ENST00000589318	COX6A1	P12074	109 aa		14	□□□□□ -0.17
DDX39A-209	ENST00000589318	C4BPB	P20851	252 aa		14	□□□□□ -0.17
DDX39A-209	ENST00000589318	HSF2	Q03933	536 aa		14	□□□□□ -0.17
DDX39A-209	ENST00000589318	C1D	Q13901	141 aa	Known RBP	14	□□□□□ -0.17
DDX39A-209	ENST00000589318	CLEC12A	Q5QGZ9	265 aa		14	□□□□□ -0.17
DDX39A-209	ENST00000589318	WBP2NL	Q6ICG8	309 aa		14	□□□□□ -0.17
DDX39A-209	ENST00000589318	SLC30A6	Q6NXT4	461 aa		14	□□□□□ -0.17
DDX39A-209	ENST00000589318	BCDIN3D	Q7Z5W3	292 aa	Known RBP	14	□□□□□ -0.17
DDX39A-209	ENST00000589318	FAM26E	Q8N5C1	309 aa		14	□□□□□ -0.17
DDX39A-209	ENST00000589318	BRIX1	Q8TDN6	353 aa	Known RBP	14	□□□□□ -0.17
DDX39A-209	ENST00000589318	OSTF1	Q92882	214 aa		14	□□□□□ -0.17
DDX39A-209	ENST00000589318	IMMP1L	Q96LU5	166 aa		14	□□□□□ -0.17
DDX39A-209	ENST00000589318	SOST	Q9BQB4	213 aa		14	□□□□□ -0.17
DDX39A-209	ENST00000589318	TSSK6	Q9BXA6	273 aa		14	□□□□□ -0.17
DDX39A-209	ENST00000589318	ENKD1	Q9H0I2	346 aa		14	□□□□□ -0.17
DDX39A-209	ENST00000589318	ZNF700	Q9H0M5	742 aa		14	□□□□□ -0.17
DDX39A-209	ENST00000589318	PPIL3	Q9H2H8	161 aa	Known RBP	14	□□□□□ -0.17
DDX39A-209	ENST00000589318	RPS6KB2	Q9UBS0	482 aa		14	□□□□□ -0.17
DDX39A-209	ENST00000589318	SIGLEC7	Q9Y286	467 aa		14	□□□□□ -0.17
DDX39A-209	ENST00000589318	LSM2	Q9Y333	95 aa	Known RBP	14	□□□□□ -0.17
DDX39A-209	ENST00000589318	SESN1	Q9Y6P5	492 aa		14	□□□□□ -0.17
DDX39A-209	ENST00000589318	KNTC1	P50748	2209 aa		14	□□□□□ -0.17
DDX39A-209	ENST00000589318	IGKV1D-42	A0A075B6H8	117 aa		14	□□□□□ -0.17
DDX39A-209	ENST00000589318	INMT-MINDY4	F8WBC2	141 aa		14	□□□□□ -0.17
DDX39A-209	ENST00000589318	LRP3	O75074	770 aa		14	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms