RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 ZNF485Q8NCK3 441 aa7.93□□□□□ -1.14
SMAD4-206ENST00000588860 NPEPL1Q8NDH3 523 aa7.93□□□□□ -1.14
SMAD4-206ENST00000588860 ATP6V1C2Q8NEY4 427 aa7.93□□□□□ -1.14
SMAD4-206ENST00000588860 OR11G2Q8NGC1 345 aa7.93□□□□□ -1.14
SMAD4-206ENST00000588860 OR51L1Q8NGJ5 315 aa7.93□□□□□ -1.14
SMAD4-206ENST00000588860 OR6Q1Q8NGQ2 317 aa7.93□□□□□ -1.14
SMAD4-206ENST00000588860 ZPLD1Q8TCW7 415 aa7.93□□□□□ -1.14
SMAD4-206ENST00000588860 STK35Q8TDR2 534 aa7.93□□□□□ -1.14
SMAD4-206ENST00000588860 SMAP2Q8WU79 429 aaPredicted RBP7.93□□□□□ -1.14
SMAD4-206ENST00000588860 ASB15Q8WXK1 588 aa7.93□□□□□ -1.14
SMAD4-206ENST00000588860 TM9SF4Q92544 642 aa7.93□□□□□ -1.14
SMAD4-206ENST00000588860 RELTQ969Z4 430 aa7.93□□□□□ -1.14
SMAD4-206ENST00000588860 TSPAN32Q96QS1 320 aa7.93□□□□□ -1.14
SMAD4-206ENST00000588860 ZNF649Q9BS31 505 aa7.93□□□□□ -1.14
SMAD4-206ENST00000588860 PTDSS2Q9BVG9 487 aa7.93□□□□□ -1.14
SMAD4-206ENST00000588860 KRTAP4-6Q9BYQ5 205 aa7.93□□□□□ -1.14
SMAD4-206ENST00000588860 OR11A1Q9GZK7 315 aa7.93□□□□□ -1.14
SMAD4-206ENST00000588860 SLIRPQ9GZT3 109 aaKnown RBP7.93□□□□□ -1.14
SMAD4-206ENST00000588860 ISG20L2Q9H9L3 353 aaKnown RBP7.93□□□□□ -1.14
SMAD4-206ENST00000588860 VDAC3Q9Y277 283 aa7.93□□□□□ -1.14
SMAD4-206ENST00000588860 CAB39Q9Y376 341 aaPredicted RBP7.93□□□□□ -1.14
SMAD4-206ENST00000588860 HRH3Q9Y5N1 445 aa7.93□□□□□ -1.14
SMAD4-206ENST00000588860 WIF1Q9Y5W5 379 aa7.93□□□□□ -1.14
SMAD4-206ENST00000588860 NBEAQ8NFP9 2946 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 IGLV3-32A0A0A0MS00 114 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 OR6C68A6NDL8 312 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 B4DXG7 233 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 SHISA8B8ZZ34 492 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 C9orf172C9J069 976 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 C11orf98E9PRG8 122 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 J3QRK9 145 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 LRRTM2O43300 516 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 RNF13O43567 381 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 NPIPB7O75200 414 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 DKK1O94907 266 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 OR6A2O95222 327 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 TXNDC12O95881 172 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 RENP00797 406 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 MT-ND5P03915 603 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 RAB40ALP0C0E4 278 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 APEHP13798 732 aaKnown RBP7.92□□□□□ -1.14
SMAD4-206ENST00000588860 TCEA1P23193 301 aaKnown RBP7.92□□□□□ -1.14
SMAD4-206ENST00000588860 GRPRP30550 384 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 SDHAP31040 664 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 GABRA5P31644 462 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 PYCR1P32322 319 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 SOX6P35712 828 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 NAA10P41227 235 aaPredicted RBP7.92□□□□□ -1.14
SMAD4-206ENST00000588860 APOBEC1P41238 236 aaKnown RBP7.92□□□□□ -1.14
SMAD4-206ENST00000588860 CDKN2AP42771 156 aaKnown RBP7.92□□□□□ -1.14
SMAD4-206ENST00000588860 DIO1P49895 249 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 SSR4P51571 173 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 BMXP51813 675 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 SLC25A1P53007 311 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 ZNF85Q03923 595 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 GALEQ14376 348 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 GGTLC2Q14390 218 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 PON3Q15166 354 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 ZNF404Q494X3 552 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 EMC4Q5J8M3 183 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 SLC35D3Q5M8T2 416 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 FAM69AQ5T7M9 428 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 PRAMEF20Q5VT98 475 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 GPR139Q6DWJ6 353 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 OPN5Q6U736 354 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 C5orf46Q6UWT4 87 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 DHRS13Q6UX07 377 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 IL20RBQ6UXL0 311 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 FAM122BQ7Z309 247 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 TIPARPQ7Z3E1 657 aaKnown RBP7.92□□□□□ -1.14
SMAD4-206ENST00000588860 SLC35F2Q8IXU6 374 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 OR2M3Q8NG83 312 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 OR4K17Q8NGC6 315 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 OR6K6Q8NGW6 343 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 OR5J2Q8NH18 312 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 S100ZQ8WXG8 99 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 TMEM203Q969S6 136 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 C1GALT1C1Q96EU7 318 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 TRMT61AQ96FX7 289 aaKnown RBP7.92□□□□□ -1.14
SMAD4-206ENST00000588860 NPAS1Q99742 590 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 TMED9Q9BVK6 235 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 TTTY10Q9BZA0 68 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 NMNAT2Q9BZQ4 307 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 WDR12Q9GZL7 423 aaKnown RBP7.92□□□□□ -1.14
SMAD4-206ENST00000588860 C6orf62Q9GZU0 229 aaPredicted RBP7.92□□□□□ -1.14
SMAD4-206ENST00000588860 CDCP1Q9H5V8 836 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 RERGLQ9H628 205 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 HMG20AQ9NP66 347 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 AKIP1Q9NQ31 210 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 RPRD1BQ9NQG5 326 aaKnown RBP7.92□□□□□ -1.14
SMAD4-206ENST00000588860 INIPQ9NRY2 104 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 ASB6Q9NWX5 421 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 TXNL4BQ9NX01 149 aaKnown RBP7.92□□□□□ -1.14
SMAD4-206ENST00000588860 HAO2Q9NYQ3 351 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 FOXJ2Q9P0K8 574 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 GRHPRQ9UBQ7 328 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 TCFL5Q9UL49 500 aa7.92□□□□□ -1.14
SMAD4-206ENST00000588860 YARS2Q9Y2Z4 477 aaKnown RBP7.92□□□□□ -1.14
SMAD4-206ENST00000588860 DSPP15924 2871 aaKnown RBP7.92□□□□□ -1.14
SMAD4-206ENST00000588860 PTPRBP23467 1997 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms