RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 TPT1P8Q9HAU6 139 aa15.88■□□□□ 0.13
CCDC43-204ENST00000588687 CRLF2Q9HC73 371 aa15.88■□□□□ 0.13
CCDC43-204ENST00000588687 ZNF99A8MXY4 864 aaPredicted RBP15.87■□□□□ 0.13
CCDC43-204ENST00000588687 M0R082 166 aa15.87■□□□□ 0.13
CCDC43-204ENST00000588687 SLC43A1O75387 559 aa15.87■□□□□ 0.13
CCDC43-204ENST00000588687 ADRA2AP08913 450 aa15.87■□□□□ 0.13
CCDC43-204ENST00000588687 ZNF43P17038 809 aa15.87■□□□□ 0.13
CCDC43-204ENST00000588687 NCF2P19878 526 aaPredicted RBP15.87■□□□□ 0.13
CCDC43-204ENST00000588687 HTR2AP28223 471 aa15.87■□□□□ 0.13
CCDC43-204ENST00000588687 CRATP43155 626 aa15.87■□□□□ 0.13
CCDC43-204ENST00000588687 STX3Q13277 289 aa15.87■□□□□ 0.13
CCDC43-204ENST00000588687 CCNIQ14094 377 aa15.87■□□□□ 0.13
CCDC43-204ENST00000588687 KRT71Q3SY84 523 aa15.87■□□□□ 0.13
CCDC43-204ENST00000588687 ELFN2Q5R3F8 820 aa15.87■□□□□ 0.13
CCDC43-204ENST00000588687 ATG16L1Q676U5 607 aa15.87■□□□□ 0.13
CCDC43-204ENST00000588687 DEF8Q6ZN54 512 aa15.87■□□□□ 0.13
CCDC43-204ENST00000588687 MREGQ8N565 214 aa15.87■□□□□ 0.13
CCDC43-204ENST00000588687 ZNF417Q8TAU3 575 aa15.87■□□□□ 0.13
CCDC43-204ENST00000588687 TAAR8Q969N4 342 aa15.87■□□□□ 0.13
CCDC43-204ENST00000588687 SLC25A36Q96CQ1 311 aa15.87■□□□□ 0.13
CCDC43-204ENST00000588687 MS4A3Q96HJ5 214 aa15.87■□□□□ 0.13
CCDC43-204ENST00000588687 MAELQ96JY0 434 aaKnown RBP15.87■□□□□ 0.13
CCDC43-204ENST00000588687 OXGR1Q96P68 337 aa15.87■□□□□ 0.13
CCDC43-204ENST00000588687 ZNF587Q96SQ5 575 aaPredicted RBP15.87■□□□□ 0.13
CCDC43-204ENST00000588687 MRPL37Q9BZE1 423 aaKnown RBP15.87■□□□□ 0.13
CCDC43-204ENST00000588687 RACGAP1Q9H0H5 632 aa15.87■□□□□ 0.13
CCDC43-204ENST00000588687 TPK1Q9H3S4 243 aa15.87■□□□□ 0.13
CCDC43-204ENST00000588687 DYNLRB1Q9NP97 96 aa15.87■□□□□ 0.13
CCDC43-204ENST00000588687 ZNF224Q9NZL3 707 aa15.87■□□□□ 0.13
CCDC43-204ENST00000588687 PCDHB14Q9Y5E9 798 aa15.87■□□□□ 0.13
CCDC43-204ENST00000588687 PKD1L1Q8TDX9 2849 aa15.87■□□□□ 0.13
CCDC43-204ENST00000588687 A0A0G2JPF8 293 aa15.86■□□□□ 0.13
CCDC43-204ENST00000588687 LOC102725191A0A1B0GVB3 256 aa15.86■□□□□ 0.13
CCDC43-204ENST00000588687 SH3PXD2BA1X283 911 aa15.86■□□□□ 0.13
CCDC43-204ENST00000588687 HNRNPCL2B2RXH8 293 aa15.86■□□□□ 0.13
CCDC43-204ENST00000588687 HNRNPCL3B7ZW38 293 aa15.86■□□□□ 0.13
CCDC43-204ENST00000588687 HNRNPCL1O60812 293 aaKnown RBP15.86■□□□□ 0.13
CCDC43-204ENST00000588687 VENTXO95231 258 aa15.86■□□□□ 0.13
CCDC43-204ENST00000588687 IL6P05231 212 aa15.86■□□□□ 0.13
CCDC43-204ENST00000588687 NUDT7P0C024 238 aa15.86■□□□□ 0.13
CCDC43-204ENST00000588687 HNRNPCL4P0DMR1 293 aa15.86■□□□□ 0.13
CCDC43-204ENST00000588687 IFNGR1P15260 489 aa15.86■□□□□ 0.13
CCDC43-204ENST00000588687 ZNF14P17017 642 aaPredicted RBP15.86■□□□□ 0.13
CCDC43-204ENST00000588687 NR4A1P22736 598 aa15.86■□□□□ 0.13
CCDC43-204ENST00000588687 DAG1Q14118 895 aa15.86■□□□□ 0.13
CCDC43-204ENST00000588687 PDCD4Q53EL6 469 aaKnown RBP15.86■□□□□ 0.13
CCDC43-204ENST00000588687 FAM69AQ5T7M9 428 aa15.86■□□□□ 0.13
CCDC43-204ENST00000588687 KRT80Q6KB66 452 aa15.86■□□□□ 0.13
CCDC43-204ENST00000588687 NHLRC1Q6VVB1 395 aa15.86■□□□□ 0.13
CCDC43-204ENST00000588687 RINLQ6ZS11 566 aa15.86■□□□□ 0.13
CCDC43-204ENST00000588687 ZNF627Q7L945 461 aa15.86■□□□□ 0.13
CCDC43-204ENST00000588687 ADPRHL1Q8NDY3 354 aa15.86■□□□□ 0.13
CCDC43-204ENST00000588687 MRPL24Q96A35 216 aaKnown RBP15.86■□□□□ 0.13
CCDC43-204ENST00000588687 C12orf10Q9HB07 376 aa15.86■□□□□ 0.13
CCDC43-204ENST00000588687 BCL2L10Q9HD36 194 aa15.86■□□□□ 0.13
CCDC43-204ENST00000588687 AIM2O14862 343 aa15.85■□□□□ 0.13
CCDC43-204ENST00000588687 HDAC3O15379 428 aa15.85■□□□□ 0.13
CCDC43-204ENST00000588687 SNNO75324 88 aaPredicted RBP15.85■□□□□ 0.13
CCDC43-204ENST00000588687 HPRP00739 348 aa15.85■□□□□ 0.13
CCDC43-204ENST00000588687 HLA-HP01893 362 aa15.85■□□□□ 0.13
CCDC43-204ENST00000588687 ERCC1P07992 297 aaPredicted RBP15.85■□□□□ 0.13
CCDC43-204ENST00000588687 BMP2P12643 396 aa15.85■□□□□ 0.13
CCDC43-204ENST00000588687 ZNF35P13682 527 aa15.85■□□□□ 0.13
CCDC43-204ENST00000588687 GRPRP30550 384 aa15.85■□□□□ 0.13
CCDC43-204ENST00000588687 SRP14P37108 136 aaKnown RBP15.85■□□□□ 0.13
CCDC43-204ENST00000588687 EVX1P49640 407 aa15.85■□□□□ 0.13
CCDC43-204ENST00000588687 IL1RL1Q01638 556 aa15.85■□□□□ 0.13
CCDC43-204ENST00000588687 WDR93Q6P2C0 686 aa15.85■□□□□ 0.13
CCDC43-204ENST00000588687 MSANTD1Q6ZTZ1 278 aa15.85■□□□□ 0.13
CCDC43-204ENST00000588687 MAVSQ7Z434 540 aa15.85■□□□□ 0.13
CCDC43-204ENST00000588687 CARM1Q86X55 608 aa15.85■□□□□ 0.13
CCDC43-204ENST00000588687 GPR137CQ8N3F9 429 aa15.85■□□□□ 0.13
CCDC43-204ENST00000588687 LSMEM1Q8N8F7 131 aa15.85■□□□□ 0.13
CCDC43-204ENST00000588687 PIK3C3Q8NEB9 887 aa15.85■□□□□ 0.13
CCDC43-204ENST00000588687 IL17RDQ8NFM7 739 aa15.85■□□□□ 0.13
CCDC43-204ENST00000588687 MAL2Q969L2 176 aa15.85■□□□□ 0.13
CCDC43-204ENST00000588687 SLC41A3Q96GZ6 507 aa15.85■□□□□ 0.13
CCDC43-204ENST00000588687 ZBTB18Q99592 522 aa15.85■□□□□ 0.13
CCDC43-204ENST00000588687 A4GALTQ9NPC4 353 aa15.85■□□□□ 0.13
CCDC43-204ENST00000588687 SDR39U1Q9NRG7 319 aaPredicted RBP15.85■□□□□ 0.13
CCDC43-204ENST00000588687 KLHL14Q9P2G3 628 aa15.85■□□□□ 0.13
CCDC43-204ENST00000588687 USP22Q9UPT9 525 aa15.85■□□□□ 0.13
CCDC43-204ENST00000588687 IFT52Q9Y366 437 aa15.85■□□□□ 0.13
CCDC43-204ENST00000588687 DYSFO75923 2080 aa15.85■□□□□ 0.13
CCDC43-204ENST00000588687 RGS16O15492 202 aaPredicted RBP15.84■□□□□ 0.13
CCDC43-204ENST00000588687 SLC22A3O75751 556 aa15.84■□□□□ 0.13
CCDC43-204ENST00000588687 HLA-DOBP13765 273 aa15.84■□□□□ 0.13
CCDC43-204ENST00000588687 IDO1P14902 403 aa15.84■□□□□ 0.13
CCDC43-204ENST00000588687 CFPP27918 469 aa15.84■□□□□ 0.13
CCDC43-204ENST00000588687 ZNF311Q5JNZ3 666 aa15.84■□□□□ 0.13
CCDC43-204ENST00000588687 CCDC36Q8IYA8 594 aa15.84■□□□□ 0.13
CCDC43-204ENST00000588687 C20orf196Q8IYI0 205 aa15.84■□□□□ 0.13
CCDC43-204ENST00000588687 OR9I1Q8NGQ6 314 aa15.84■□□□□ 0.13
CCDC43-204ENST00000588687 CLDND2Q8NHS1 167 aa15.84■□□□□ 0.13
CCDC43-204ENST00000588687 MYEF2Q9P2K5 600 aaKnown RBP15.84■□□□□ 0.13
CCDC43-204ENST00000588687 CMAHPQ9Y471 501 aa15.84■□□□□ 0.13
CCDC43-204ENST00000588687 TRRAPQ9Y4A5 3859 aa15.83■□□□□ 0.13
CCDC43-204ENST00000588687 A0A1B0GWA3 101 aa15.83■□□□□ 0.12
CCDC43-204ENST00000588687 B4DSR2 109 aa15.83■□□□□ 0.12
CCDC43-204ENST00000588687 FAM157AC9JC47 383 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms