RNA–Protein interactions for RNA: ENST00000588260.1

AC003043.1-201, humanhuman

TSL 3 BASIC

Gene AC003043.1, Length 337 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003043.1-201ENST00000588260 C16orf89Q6UX73 402 aa12.17□□□□□ -0.46
AC003043.1-201ENST00000588260 ZNF704Q6ZNC4 412 aaPredicted RBP12.17□□□□□ -0.46
AC003043.1-201ENST00000588260 CBLL1Q75N03 491 aa12.17□□□□□ -0.46
AC003043.1-201ENST00000588260 VTCN1Q7Z7D3 282 aa12.17□□□□□ -0.46
AC003043.1-201ENST00000588260 PGAM4Q8N0Y7 254 aa12.17□□□□□ -0.46
AC003043.1-201ENST00000588260 GPR137CQ8N3F9 429 aa12.17□□□□□ -0.46
AC003043.1-201ENST00000588260 C17orf78Q8N4C9 275 aa12.17□□□□□ -0.46
AC003043.1-201ENST00000588260 C1orf162Q8NEQ5 155 aaPredicted RBP12.17□□□□□ -0.46
AC003043.1-201ENST00000588260 HSH2DQ96JZ2 352 aa12.17□□□□□ -0.46
AC003043.1-201ENST00000588260 PRRC1Q96M27 445 aa12.17□□□□□ -0.46
AC003043.1-201ENST00000588260 HS6ST2Q96MM7 605 aa12.17□□□□□ -0.46
AC003043.1-201ENST00000588260 PRSS27Q9BQR3 290 aa12.17□□□□□ -0.46
AC003043.1-201ENST00000588260 ZNF426Q9BUY5 554 aa12.17□□□□□ -0.46
AC003043.1-201ENST00000588260 FKRPQ9H9S5 495 aa12.17□□□□□ -0.46
AC003043.1-201ENST00000588260 CCM2LQ9NUG4 571 aaPredicted RBP12.17□□□□□ -0.46
AC003043.1-201ENST00000588260 B3GAT1Q9P2W7 334 aa12.17□□□□□ -0.46
AC003043.1-201ENST00000588260 EGFL7Q9UHF1 273 aa12.17□□□□□ -0.46
AC003043.1-201ENST00000588260 ZNF229Q9UJW7 825 aa12.17□□□□□ -0.46
AC003043.1-201ENST00000588260 MS4A18H0YCH9 400 aa12.16□□□□□ -0.46
AC003043.1-201ENST00000588260 PDLIM1O00151 329 aa12.16□□□□□ -0.46
AC003043.1-201ENST00000588260 PLPP3O14495 311 aa12.16□□□□□ -0.46
AC003043.1-201ENST00000588260 CLOCKO15516 846 aa12.16□□□□□ -0.46
AC003043.1-201ENST00000588260 TRAF3IP2O43734 574 aaPredicted RBP12.16□□□□□ -0.46
AC003043.1-201ENST00000588260 SERPINI2O75830 405 aa12.16□□□□□ -0.46
AC003043.1-201ENST00000588260 LOXP28300 417 aaPredicted RBP12.16□□□□□ -0.46
AC003043.1-201ENST00000588260 FOXG1P55316 489 aaPredicted RBP12.16□□□□□ -0.46
AC003043.1-201ENST00000588260 KRT72Q14CN4 511 aa12.16□□□□□ -0.46
AC003043.1-201ENST00000588260 MS4A18Q3C1V0 323 aa12.16□□□□□ -0.46
AC003043.1-201ENST00000588260 SAMD4BQ5PRF9 694 aaKnown RBP12.16□□□□□ -0.46
AC003043.1-201ENST00000588260 NCMAPQ5T1S8 102 aa12.16□□□□□ -0.46
AC003043.1-201ENST00000588260 GLYATQ6IB77 296 aa12.16□□□□□ -0.46
AC003043.1-201ENST00000588260 HMBOX1Q6NT76 420 aa12.16□□□□□ -0.46
AC003043.1-201ENST00000588260 KLHL17Q6TDP4 642 aa12.16□□□□□ -0.46
AC003043.1-201ENST00000588260 NANOGNBQ7Z5D8 188 aa12.16□□□□□ -0.46
AC003043.1-201ENST00000588260 PXKQ7Z7A4 578 aa12.16□□□□□ -0.46
AC003043.1-201ENST00000588260 CYP4Z1Q86W10 505 aa12.16□□□□□ -0.46
AC003043.1-201ENST00000588260 NKAIN4Q8IVV8 208 aa12.16□□□□□ -0.46
AC003043.1-201ENST00000588260 RNF148Q8N7C7 305 aa12.16□□□□□ -0.46
AC003043.1-201ENST00000588260 PIK3C3Q8NEB9 887 aa12.16□□□□□ -0.46
AC003043.1-201ENST00000588260 OR52N5Q8NH56 324 aa12.16□□□□□ -0.46
AC003043.1-201ENST00000588260 TMEM255BQ8WV15 326 aa12.16□□□□□ -0.46
AC003043.1-201ENST00000588260 TMEM239Q8WW34 195 aa12.16□□□□□ -0.46
AC003043.1-201ENST00000588260 MUS81Q96NY9 551 aa12.16□□□□□ -0.46
AC003043.1-201ENST00000588260 ALKBH3Q96Q83 286 aaPredicted RBP12.16□□□□□ -0.46
AC003043.1-201ENST00000588260 FNDC11Q9BVV2 318 aa12.16□□□□□ -0.46
AC003043.1-201ENST00000588260 LINC00470Q9BZP3 86 aa12.16□□□□□ -0.46
AC003043.1-201ENST00000588260 AMDHD2Q9Y303 409 aa12.16□□□□□ -0.46
AC003043.1-201ENST00000588260 MED31Q9Y3C7 131 aa12.16□□□□□ -0.46
AC003043.1-201ENST00000588260 RNF115Q9Y4L5 304 aa12.16□□□□□ -0.46
AC003043.1-201ENST00000588260 CSMD1Q96PZ7 3565 aa12.16□□□□□ -0.46
AC003043.1-201ENST00000588260 OTOGQ6ZRI0 2925 aa12.16□□□□□ -0.46
AC003043.1-201ENST00000588260 CSMD2Q7Z408 3487 aa12.15□□□□□ -0.46
AC003043.1-201ENST00000588260 ZNF726A6NNF4 738 aa12.15□□□□□ -0.46
AC003043.1-201ENST00000588260 C11orf98E9PRG8 122 aa12.15□□□□□ -0.46
AC003043.1-201ENST00000588260 RNF13O43567 381 aa12.15□□□□□ -0.46
AC003043.1-201ENST00000588260 ATE1O95260 518 aa12.15□□□□□ -0.46
AC003043.1-201ENST00000588260 HPRP00739 348 aa12.15□□□□□ -0.46
AC003043.1-201ENST00000588260 MT-ND1P03886 318 aa12.15□□□□□ -0.46
AC003043.1-201ENST00000588260 TCN1P20061 433 aaPredicted RBP12.15□□□□□ -0.46
AC003043.1-201ENST00000588260 SH3BGRP55822 239 aaPredicted RBP12.15□□□□□ -0.46
AC003043.1-201ENST00000588260 SLC25A3Q00325 362 aa12.15□□□□□ -0.46
AC003043.1-201ENST00000588260 ROR2Q01974 943 aaKnown RBP12.15□□□□□ -0.46
AC003043.1-201ENST00000588260 BSPH1Q075Z2 132 aa12.15□□□□□ -0.46
AC003043.1-201ENST00000588260 LGALS3BPQ08380 585 aa12.15□□□□□ -0.46
AC003043.1-201ENST00000588260 ACKR1Q16570 336 aa12.15□□□□□ -0.46
AC003043.1-201ENST00000588260 C1QTNF12Q5T7M4 302 aa12.15□□□□□ -0.46
AC003043.1-201ENST00000588260 C20orf204Q6ZNR8 217 aa12.15□□□□□ -0.46
AC003043.1-201ENST00000588260 FITM2Q8N6M3 262 aa12.15□□□□□ -0.46
AC003043.1-201ENST00000588260 ANKK1Q8NFD2 765 aa12.15□□□□□ -0.46
AC003043.1-201ENST00000588260 SGTBQ96EQ0 304 aa12.15□□□□□ -0.46
AC003043.1-201ENST00000588260 OR2M2Q96R28 347 aa12.15□□□□□ -0.46
AC003043.1-201ENST00000588260 CDRT15Q96T59 188 aa12.15□□□□□ -0.46
AC003043.1-201ENST00000588260 AMBRA1Q9C0C7 1298 aa12.15□□□□□ -0.46
AC003043.1-201ENST00000588260 B3GAT2Q9NPZ5 323 aa12.15□□□□□ -0.46
AC003043.1-201ENST00000588260 MAGEL2Q9UJ55 1249 aa12.15□□□□□ -0.46
AC003043.1-201ENST00000588260 ADAM21Q9UKJ8 722 aa12.15□□□□□ -0.46
AC003043.1-201ENST00000588260 SAMD4AQ9UPU9 718 aaKnown RBP12.15□□□□□ -0.46
AC003043.1-201ENST00000588260 MAGED1Q9Y5V3 778 aaPredicted RBP12.15□□□□□ -0.46
AC003043.1-201ENST00000588260 PRR14LQ5THK1 2151 aa12.15□□□□□ -0.47
AC003043.1-201ENST00000588260 A0A1W2PR80 420 aa12.14□□□□□ -0.47
AC003043.1-201ENST00000588260 UPK3AO75631 287 aa12.14□□□□□ -0.47
AC003043.1-201ENST00000588260 ZNF432O94892 652 aa12.14□□□□□ -0.47
AC003043.1-201ENST00000588260 WNT11O96014 354 aa12.14□□□□□ -0.47
AC003043.1-201ENST00000588260 HLA-DOBP13765 273 aa12.14□□□□□ -0.47
AC003043.1-201ENST00000588260 HSD17B1P14061 328 aa12.14□□□□□ -0.47
AC003043.1-201ENST00000588260 YAP1P46937 504 aaKnown RBP12.14□□□□□ -0.47
AC003043.1-201ENST00000588260 ZNF83P51522 516 aa12.14□□□□□ -0.47
AC003043.1-201ENST00000588260 UGT2B15P54855 530 aa12.14□□□□□ -0.47
AC003043.1-201ENST00000588260 PRPS1P60891 318 aa12.14□□□□□ -0.47
AC003043.1-201ENST00000588260 TRAM2Q15035 370 aa12.14□□□□□ -0.47
AC003043.1-201ENST00000588260 CARD17Q5XLA6 110 aa12.14□□□□□ -0.47
AC003043.1-201ENST00000588260 TMEM108Q6UXF1 575 aa12.14□□□□□ -0.47
AC003043.1-201ENST00000588260 DEFB107AQ8IZN7 70 aa12.14□□□□□ -0.47
AC003043.1-201ENST00000588260 OFCC1Q8IZS5 231 aa12.14□□□□□ -0.47
AC003043.1-201ENST00000588260 LRRC17Q8N6Y2 441 aa12.14□□□□□ -0.47
AC003043.1-201ENST00000588260 PFN4Q8NHR9 129 aa12.14□□□□□ -0.47
AC003043.1-201ENST00000588260 PIGTQ969N2 578 aa12.14□□□□□ -0.47
AC003043.1-201ENST00000588260 MBD6Q96DN6 1003 aa12.14□□□□□ -0.47
AC003043.1-201ENST00000588260 NSL1Q96IY1 281 aa12.14□□□□□ -0.47
AC003043.1-201ENST00000588260 CCL19Q99731 98 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms