RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, human

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBD1-208	ENST00000588009	FAIM2	Q9BWQ8	316 aa		4.12	□□□□□ -1.75
TUBD1-208	ENST00000588009	GEMIN7	Q9H840	131 aa	Known RBP	4.12	□□□□□ -1.75
TUBD1-208	ENST00000588009	APOBEC3B	Q9UH17	382 aa	Known RBP	4.12	□□□□□ -1.75
TUBD1-208	ENST00000588009	KLHL21	Q9UJP4	597 aa		4.12	□□□□□ -1.75
TUBD1-208	ENST00000588009	PITPNC1	Q9UKF7	332 aa		4.12	□□□□□ -1.75
TUBD1-208	ENST00000588009	NUP50	Q9UKX7	468 aa		4.12	□□□□□ -1.75
TUBD1-208	ENST00000588009	VANGL2	Q9ULK5	521 aa		4.12	□□□□□ -1.75
TUBD1-208	ENST00000588009	ABCA9	Q8IUA7	1624 aa		4.12	□□□□□ -1.75
TUBD1-208	ENST00000588009	IQGAP1	P46940	1657 aa		4.12	□□□□□ -1.75
TUBD1-208	ENST00000588009	TMEM94	Q12767	1356 aa		4.12	□□□□□ -1.75
TUBD1-208	ENST00000588009	BRWD3	Q6RI45	1802 aa		4.11	□□□□□ -1.75
TUBD1-208	ENST00000588009	RAI1	Q7Z5J4	1906 aa	Predicted RBP	4.11	□□□□□ -1.75
TUBD1-208	ENST00000588009	IGHV7-81	A0A0B4J1V7	117 aa		4.11	□□□□□ -1.75
TUBD1-208	ENST00000588009	GOLGA6L7	A0A1B0GV03	622 aa		4.11	□□□□□ -1.75
TUBD1-208	ENST00000588009	LOC110117498-PIK3R3	F6TDL0	507 aa		4.11	□□□□□ -1.75
TUBD1-208	ENST00000588009		K7N7A8	449 aa		4.11	□□□□□ -1.75
TUBD1-208	ENST00000588009	DLGAP1	O14490	977 aa		4.11	□□□□□ -1.75
TUBD1-208	ENST00000588009	TBL1X	O60907	577 aa		4.11	□□□□□ -1.75
TUBD1-208	ENST00000588009	CCDC166	P0CW27	439 aa		4.11	□□□□□ -1.75
TUBD1-208	ENST00000588009	ABO	P16442	354 aa		4.11	□□□□□ -1.75
TUBD1-208	ENST00000588009	ZNF43	P17038	809 aa		4.11	□□□□□ -1.75
TUBD1-208	ENST00000588009	ZP3	P21754	424 aa		4.11	□□□□□ -1.75
TUBD1-208	ENST00000588009	AQP1	P29972	269 aa		4.11	□□□□□ -1.75
TUBD1-208	ENST00000588009	OTX1	P32242	354 aa	Predicted RBP	4.11	□□□□□ -1.75
TUBD1-208	ENST00000588009	SHMT2	P34897	504 aa		4.11	□□□□□ -1.75
TUBD1-208	ENST00000588009	VEGFC	P49767	419 aa		4.11	□□□□□ -1.75
TUBD1-208	ENST00000588009	GPM6A	P51674	278 aa		4.11	□□□□□ -1.75
TUBD1-208	ENST00000588009	MERTK	Q12866	999 aa		4.11	□□□□□ -1.75
TUBD1-208	ENST00000588009	GSG1	Q2KHT4	349 aa		4.11	□□□□□ -1.75
TUBD1-208	ENST00000588009	PARP15	Q460N3	678 aa		4.11	□□□□□ -1.75
TUBD1-208	ENST00000588009	ATAD3C	Q5T2N8	411 aa		4.11	□□□□□ -1.75
TUBD1-208	ENST00000588009	NIPA1	Q7RTP0	329 aa		4.11	□□□□□ -1.75
TUBD1-208	ENST00000588009	PPP1R27	Q86WC6	154 aa		4.11	□□□□□ -1.75
TUBD1-208	ENST00000588009	VRK2	Q86Y07	508 aa		4.11	□□□□□ -1.75
TUBD1-208	ENST00000588009	OFCC1	Q8IZS5	231 aa		4.11	□□□□□ -1.75
TUBD1-208	ENST00000588009	KLHL30-AS1	Q8NEE0	82 aa		4.11	□□□□□ -1.75
TUBD1-208	ENST00000588009	OR13F1	Q8NGS4	319 aa		4.11	□□□□□ -1.75
TUBD1-208	ENST00000588009	PLPPR1	Q8TBJ4	325 aa		4.11	□□□□□ -1.75
TUBD1-208	ENST00000588009	GPR151	Q8TDV0	419 aa		4.11	□□□□□ -1.75
TUBD1-208	ENST00000588009	PYROXD1	Q8WU10	500 aa		4.11	□□□□□ -1.75
TUBD1-208	ENST00000588009	CMTM7	Q96FZ5	175 aa		4.11	□□□□□ -1.75
TUBD1-208	ENST00000588009	ZNF578	Q96N58	590 aa	Predicted RBP	4.11	□□□□□ -1.75
TUBD1-208	ENST00000588009	KIR2DL4	Q99706	377 aa		4.11	□□□□□ -1.75
TUBD1-208	ENST00000588009	C20orf24	Q9BUV8	137 aa		4.11	□□□□□ -1.75
TUBD1-208	ENST00000588009		Q9H3A6	140 aa		4.11	□□□□□ -1.75
TUBD1-208	ENST00000588009	PHLPP2	Q6ZVD8	1323 aa		4.11	□□□□□ -1.75
TUBD1-208	ENST00000588009	PLEKHG2	Q9H7P9	1386 aa		4.11	□□□□□ -1.75
TUBD1-208	ENST00000588009	SNED1	Q8TER0	1413 aa		4.11	□□□□□ -1.75
TUBD1-208	ENST00000588009	CNTLN	Q9NXG0	1405 aa		4.11	□□□□□ -1.75
TUBD1-208	ENST00000588009	RLF	Q13129	1914 aa		4.11	□□□□□ -1.75
TUBD1-208	ENST00000588009	A2ML1	A8K2U0	1454 aa		4.11	□□□□□ -1.75
TUBD1-208	ENST00000588009	KDM5D	Q9BY66	1539 aa		4.11	□□□□□ -1.75
TUBD1-208	ENST00000588009	IGHV1OR21-1	A0A087WYE8	117 aa		4.1	□□□□□ -1.75
TUBD1-208	ENST00000588009	TRBV11-1	A0A0K0K1C0	115 aa		4.1	□□□□□ -1.75
TUBD1-208	ENST00000588009		L7N2F9	121 aa		4.1	□□□□□ -1.75
TUBD1-208	ENST00000588009	CLOCK	O15516	846 aa		4.1	□□□□□ -1.75
TUBD1-208	ENST00000588009	LYPLA1	O75608	230 aa	Predicted RBP	4.1	□□□□□ -1.75
TUBD1-208	ENST00000588009	H6PD	O95479	791 aa		4.1	□□□□□ -1.75
TUBD1-208	ENST00000588009	SEMG1	P04279	462 aa		4.1	□□□□□ -1.75
TUBD1-208	ENST00000588009	STAG3L3	P0CL85	134 aa		4.1	□□□□□ -1.75
TUBD1-208	ENST00000588009	OR8G3P	P0DMU2	310 aa		4.1	□□□□□ -1.75
TUBD1-208	ENST00000588009	ZNF24	P17028	368 aa		4.1	□□□□□ -1.75
TUBD1-208	ENST00000588009	PRDX3	P30048	256 aa	Known RBP	4.1	□□□□□ -1.75
TUBD1-208	ENST00000588009	HSD17B2	P37059	387 aa		4.1	□□□□□ -1.75
TUBD1-208	ENST00000588009	YAP1	P46937	504 aa	Known RBP	4.1	□□□□□ -1.75
TUBD1-208	ENST00000588009	CHRNA6	Q15825	494 aa		4.1	□□□□□ -1.75
TUBD1-208	ENST00000588009	ZNF658	Q5TYW1	1059 aa	Predicted RBP	4.1	□□□□□ -1.75
TUBD1-208	ENST00000588009	MARC1	Q5VT66	337 aa		4.1	□□□□□ -1.75
TUBD1-208	ENST00000588009	SASS6	Q6UVJ0	657 aa		4.1	□□□□□ -1.75
TUBD1-208	ENST00000588009	UNQ9370/PRO34162	Q6UXP9	181 aa		4.1	□□□□□ -1.75
TUBD1-208	ENST00000588009	TMCO2	Q7Z6W1	182 aa	Predicted RBP	4.1	□□□□□ -1.75
TUBD1-208	ENST00000588009	ACOT4	Q8N9L9	421 aa		4.1	□□□□□ -1.75
TUBD1-208	ENST00000588009	B3GNT7	Q8NFL0	401 aa		4.1	□□□□□ -1.75
TUBD1-208	ENST00000588009	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	4.1	□□□□□ -1.75
TUBD1-208	ENST00000588009	STMN2	Q93045	179 aa		4.1	□□□□□ -1.75
TUBD1-208	ENST00000588009	ZNF184	Q99676	751 aa	Predicted RBP	4.1	□□□□□ -1.75
TUBD1-208	ENST00000588009	PAXX	Q9BUH6	204 aa		4.1	□□□□□ -1.75
TUBD1-208	ENST00000588009	MFF	Q9GZY8	342 aa		4.1	□□□□□ -1.75
TUBD1-208	ENST00000588009	AUNIP	Q9H7T9	357 aa		4.1	□□□□□ -1.75
TUBD1-208	ENST00000588009	ISG20L2	Q9H9L3	353 aa	Known RBP	4.1	□□□□□ -1.75
TUBD1-208	ENST00000588009	RPRD1B	Q9NQG5	326 aa	Known RBP	4.1	□□□□□ -1.75
TUBD1-208	ENST00000588009	DCDC2	Q9UHG0	476 aa		4.1	□□□□□ -1.75
TUBD1-208	ENST00000588009	LRRK1	Q38SD2	2015 aa		4.1	□□□□□ -1.75
TUBD1-208	ENST00000588009	ATP10B	O94823	1461 aa		4.1	□□□□□ -1.75
TUBD1-208	ENST00000588009	ARHGAP23	Q9P227	1491 aa		4.1	□□□□□ -1.75
TUBD1-208	ENST00000588009	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	4.1	□□□□□ -1.75
TUBD1-208	ENST00000588009		A0A1W2PQ72	361 aa		4.09	□□□□□ -1.75
TUBD1-208	ENST00000588009	TMEM110-MUSTN1	A8MSY1	372 aa		4.09	□□□□□ -1.75
TUBD1-208	ENST00000588009	HCRTR1	O43613	425 aa		4.09	□□□□□ -1.75
TUBD1-208	ENST00000588009	OR2F2	O95006	317 aa		4.09	□□□□□ -1.75
TUBD1-208	ENST00000588009	KLK3	P07288	261 aa	Predicted RBP	4.09	□□□□□ -1.75
TUBD1-208	ENST00000588009	ATP6V1B2	P21281	511 aa		4.09	□□□□□ -1.75
TUBD1-208	ENST00000588009	CCT6A	P40227	531 aa	Known RBP	4.09	□□□□□ -1.75
TUBD1-208	ENST00000588009	TLE4	Q04727	773 aa		4.09	□□□□□ -1.75
TUBD1-208	ENST00000588009	MRPL23	Q16540	153 aa	Known RBP	4.09	□□□□□ -1.75
TUBD1-208	ENST00000588009	MARCH8	Q5T0T0	291 aa		4.09	□□□□□ -1.75
TUBD1-208	ENST00000588009	C11orf71	Q6IPW1	123 aa		4.09	□□□□□ -1.75
TUBD1-208	ENST00000588009	TMEM220	Q6QAJ8	160 aa		4.09	□□□□□ -1.75
TUBD1-208	ENST00000588009	PAMR1	Q6UXH9	720 aa		4.09	□□□□□ -1.75
TUBD1-208	ENST00000588009	CCDC73	Q6ZRK6	1079 aa		4.09	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms