RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 LILRB4Q8NHJ6 448 aa12.97□□□□□ -0.33
SCAMP4-209ENST00000585335 ITLN2Q8WWU7 325 aaPredicted RBP12.97□□□□□ -0.33
SCAMP4-209ENST00000585335 TMEM45BQ96B21 275 aa12.97□□□□□ -0.33
SCAMP4-209ENST00000585335 APH1AQ96BI3 265 aa12.97□□□□□ -0.33
SCAMP4-209ENST00000585335 CENPNQ96H22 339 aaPredicted RBP12.97□□□□□ -0.33
SCAMP4-209ENST00000585335 C12orf49Q9H741 205 aa12.97□□□□□ -0.33
SCAMP4-209ENST00000585335 S100A14Q9HCY8 104 aa12.97□□□□□ -0.33
SCAMP4-209ENST00000585335 KCNJ16Q9NPI9 418 aa12.97□□□□□ -0.33
SCAMP4-209ENST00000585335 INIPQ9NRY2 104 aa12.97□□□□□ -0.33
SCAMP4-209ENST00000585335 VNN3Q9NY84 501 aa12.97□□□□□ -0.33
SCAMP4-209ENST00000585335 PDP1Q9P0J1 537 aaPredicted RBP12.97□□□□□ -0.33
SCAMP4-209ENST00000585335 KIF17Q9P2E2 1029 aa12.97□□□□□ -0.33
SCAMP4-209ENST00000585335 HIF3AQ9Y2N7 669 aa12.97□□□□□ -0.33
SCAMP4-209ENST00000585335 OR6C65A6NJZ3 312 aa12.96□□□□□ -0.33
SCAMP4-209ENST00000585335 FAM90A27PA6NNH2 459 aa12.96□□□□□ -0.33
SCAMP4-209ENST00000585335 MCIDASD6RGH6 385 aa12.96□□□□□ -0.33
SCAMP4-209ENST00000585335 MS4A18H0YCH9 400 aa12.96□□□□□ -0.33
SCAMP4-209ENST00000585335 MSTNO14793 375 aa12.96□□□□□ -0.33
SCAMP4-209ENST00000585335 SERPINI2O75830 405 aa12.96□□□□□ -0.33
SCAMP4-209ENST00000585335 CLDN14O95500 239 aa12.96□□□□□ -0.33
SCAMP4-209ENST00000585335 CD8BP10966 210 aa12.96□□□□□ -0.33
SCAMP4-209ENST00000585335 UQCRC1P31930 480 aa12.96□□□□□ -0.33
SCAMP4-209ENST00000585335 RPL4P36578 427 aaKnown RBP12.96□□□□□ -0.33
SCAMP4-209ENST00000585335 AQP2P41181 271 aa12.96□□□□□ -0.33
SCAMP4-209ENST00000585335 ASCL1P50553 236 aa12.96□□□□□ -0.33
SCAMP4-209ENST00000585335 DAP3P51398 398 aaKnown RBP12.96□□□□□ -0.33
SCAMP4-209ENST00000585335 RPS4XP62701 263 aaKnown RBP12.96□□□□□ -0.33
SCAMP4-209ENST00000585335 RPL18Q07020 188 aaKnown RBP12.96□□□□□ -0.33
SCAMP4-209ENST00000585335 TSPAN31Q12999 210 aa12.96□□□□□ -0.33
SCAMP4-209ENST00000585335 MS4A18Q3C1V0 323 aa12.96□□□□□ -0.33
SCAMP4-209ENST00000585335 ALG10Q5BKT4 473 aa12.96□□□□□ -0.33
SCAMP4-209ENST00000585335 RPL13AP3Q6NVV1 102 aa12.96□□□□□ -0.33
SCAMP4-209ENST00000585335 PGBD2Q6P3X8 592 aa12.96□□□□□ -0.33
SCAMP4-209ENST00000585335 VWA1Q6PCB0 445 aa12.96□□□□□ -0.33
SCAMP4-209ENST00000585335 AAED1Q7RTV5 226 aa12.96□□□□□ -0.33
SCAMP4-209ENST00000585335 BTLAQ7Z6A9 289 aa12.96□□□□□ -0.33
SCAMP4-209ENST00000585335 ZER1Q7Z7L7 766 aa12.96□□□□□ -0.33
SCAMP4-209ENST00000585335 HIPK1Q86Z02 1210 aa12.96□□□□□ -0.33
SCAMP4-209ENST00000585335 KDM8Q8N371 416 aa12.96□□□□□ -0.33
SCAMP4-209ENST00000585335 SVOPLQ8N434 492 aa12.96□□□□□ -0.33
SCAMP4-209ENST00000585335 OR9Q2Q8NGE9 314 aa12.96□□□□□ -0.33
SCAMP4-209ENST00000585335 OR5K1Q8NHB7 308 aa12.96□□□□□ -0.33
SCAMP4-209ENST00000585335 FANK1Q8TC84 345 aa12.96□□□□□ -0.33
SCAMP4-209ENST00000585335 LRTOMTQ8WZ04 291 aa12.96□□□□□ -0.33
SCAMP4-209ENST00000585335 ZNF775Q96BV0 537 aaPredicted RBP12.96□□□□□ -0.33
SCAMP4-209ENST00000585335 STARD4Q96DR4 205 aa12.96□□□□□ -0.33
SCAMP4-209ENST00000585335 TAS2R5Q9NYW4 299 aa12.96□□□□□ -0.33
SCAMP4-209ENST00000585335 STX18Q9P2W9 335 aaKnown RBP12.96□□□□□ -0.33
SCAMP4-209ENST00000585335 ING1Q9UK53 422 aaPredicted RBP12.96□□□□□ -0.33
SCAMP4-209ENST00000585335 RCE1Q9Y256 329 aa12.96□□□□□ -0.33
SCAMP4-209ENST00000585335 MED12LQ86YW9 2145 aa12.95□□□□□ -0.34
SCAMP4-209ENST00000585335 TRAV27A0A087WT01 109 aa12.95□□□□□ -0.34
SCAMP4-209ENST00000585335 ZNF726A6NNF4 738 aa12.95□□□□□ -0.34
SCAMP4-209ENST00000585335 H0YHG0 523 aa12.95□□□□□ -0.34
SCAMP4-209ENST00000585335 CDC42EP2O14613 210 aa12.95□□□□□ -0.34
SCAMP4-209ENST00000585335 NDUFB2O95178 105 aa12.95□□□□□ -0.34
SCAMP4-209ENST00000585335 HPRP00739 348 aa12.95□□□□□ -0.34
SCAMP4-209ENST00000585335 ADAP00813 363 aa12.95□□□□□ -0.34
SCAMP4-209ENST00000585335 ANXA8P13928 327 aa12.95□□□□□ -0.34
SCAMP4-209ENST00000585335 ZNF23P17027 643 aa12.95□□□□□ -0.34
SCAMP4-209ENST00000585335 GSSP48637 474 aa12.95□□□□□ -0.34
SCAMP4-209ENST00000585335 IST1P53990 364 aa12.95□□□□□ -0.34
SCAMP4-209ENST00000585335 CLDN17P56750 224 aa12.95□□□□□ -0.34
SCAMP4-209ENST00000585335 LAPTM4AQ15012 233 aa12.95□□□□□ -0.34
SCAMP4-209ENST00000585335 SMARCD3Q6STE5 483 aa12.95□□□□□ -0.34
SCAMP4-209ENST00000585335 NUFIP2Q7Z417 695 aaKnown RBP12.95□□□□□ -0.34
SCAMP4-209ENST00000585335 AMIGO2Q86SJ2 522 aa12.95□□□□□ -0.34
SCAMP4-209ENST00000585335 ZDHHC13Q8IUH4 622 aa12.95□□□□□ -0.34
SCAMP4-209ENST00000585335 UBE2J2Q8N2K1 259 aa12.95□□□□□ -0.34
SCAMP4-209ENST00000585335 ATG16L2Q8NAA4 619 aa12.95□□□□□ -0.34
SCAMP4-209ENST00000585335 DNAJC9Q8WXX5 260 aa12.95□□□□□ -0.34
SCAMP4-209ENST00000585335 ADAD1Q96M93 576 aaKnown RBP12.95□□□□□ -0.34
SCAMP4-209ENST00000585335 TNFRSF13CQ96RJ3 184 aa12.95□□□□□ -0.34
SCAMP4-209ENST00000585335 DGCR6LQ9BY27 220 aa12.95□□□□□ -0.34
SCAMP4-209ENST00000585335 PLSCR4Q9NRQ2 329 aa12.95□□□□□ -0.34
SCAMP4-209ENST00000585335 B3GAT1Q9P2W7 334 aa12.95□□□□□ -0.34
SCAMP4-209ENST00000585335 HIVEP3Q5T1R4 2406 aa12.95□□□□□ -0.34
SCAMP4-209ENST00000585335 NCOA6Q14686 2063 aaPredicted RBP12.94□□□□□ -0.34
SCAMP4-209ENST00000585335 CLEC18AA5D8T8 446 aa12.94□□□□□ -0.34
SCAMP4-209ENST00000585335 WIPF3A6NGB9 483 aa12.94□□□□□ -0.34
SCAMP4-209ENST00000585335 NPIPB13A6NJU9 1138 aa12.94□□□□□ -0.34
SCAMP4-209ENST00000585335 NPIPB4C9JG80 1138 aa12.94□□□□□ -0.34
SCAMP4-209ENST00000585335 G3V2T6 193 aa12.94□□□□□ -0.34
SCAMP4-209ENST00000585335 H3BNX3 289 aa12.94□□□□□ -0.34
SCAMP4-209ENST00000585335 KLF4O43474 513 aa12.94□□□□□ -0.34
SCAMP4-209ENST00000585335 TRAF3IP2O43734 574 aaPredicted RBP12.94□□□□□ -0.34
SCAMP4-209ENST00000585335 SLC43A1O75387 559 aa12.94□□□□□ -0.34
SCAMP4-209ENST00000585335 KRT33AO76009 404 aa12.94□□□□□ -0.34
SCAMP4-209ENST00000585335 CNOT4O95628 575 aaKnown RBP12.94□□□□□ -0.34
SCAMP4-209ENST00000585335 BCL10O95999 233 aa12.94□□□□□ -0.34
SCAMP4-209ENST00000585335 GASTP01350 101 aa12.94□□□□□ -0.34
SCAMP4-209ENST00000585335 TSPAN19P0C672 248 aa12.94□□□□□ -0.34
SCAMP4-209ENST00000585335 POU2F1P14859 743 aa12.94□□□□□ -0.34
SCAMP4-209ENST00000585335 IFNGR1P15260 489 aa12.94□□□□□ -0.34
SCAMP4-209ENST00000585335 OR3A2P47893 321 aa12.94□□□□□ -0.34
SCAMP4-209ENST00000585335 COX10Q12887 443 aa12.94□□□□□ -0.34
SCAMP4-209ENST00000585335 FAM205BPQ63HN1 556 aa12.94□□□□□ -0.34
SCAMP4-209ENST00000585335 ZNF770Q6IQ21 691 aaPredicted RBP12.94□□□□□ -0.34
SCAMP4-209ENST00000585335 NIPAL3Q6P499 406 aa12.94□□□□□ -0.34
SCAMP4-209ENST00000585335 CLEC18BQ6UXF7 455 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms