RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 TACO1Q9BSH4 297 aaKnown RBP16.34■□□□□ 0.21
RFFL-211ENST00000584541 EGLN3Q9H6Z9 239 aa16.34■□□□□ 0.21
RFFL-211ENST00000584541 FANCFQ9NPI8 374 aa16.34■□□□□ 0.21
RFFL-211ENST00000584541 GLRX2Q9NS18 164 aa16.34■□□□□ 0.21
RFFL-211ENST00000584541 IL20Q9NYY1 176 aa16.34■□□□□ 0.21
RFFL-211ENST00000584541 EMC3Q9P0I2 261 aa16.34■□□□□ 0.21
RFFL-211ENST00000584541 REV1Q9UBZ9 1251 aa16.34■□□□□ 0.21
RFFL-211ENST00000584541 TMEFF2Q9UIK5 374 aaPredicted RBP16.34■□□□□ 0.21
RFFL-211ENST00000584541 SH3BGRL2Q9UJC5 107 aa16.34■□□□□ 0.21
RFFL-211ENST00000584541 TINAGQ9UJW2 476 aa16.34■□□□□ 0.21
RFFL-211ENST00000584541 OSGIN2Q9Y236 505 aa16.34■□□□□ 0.21
RFFL-211ENST00000584541 GPR171O14626 319 aa16.33■□□□□ 0.2
RFFL-211ENST00000584541 SERPINI2O75830 405 aa16.33■□□□□ 0.2
RFFL-211ENST00000584541 TGM6O95932 706 aa16.33■□□□□ 0.2
RFFL-211ENST00000584541 F13BP05160 661 aa16.33■□□□□ 0.2
RFFL-211ENST00000584541 POU1F1P28069 291 aa16.33■□□□□ 0.2
RFFL-211ENST00000584541 PTDSS1P48651 473 aaKnown RBP16.33■□□□□ 0.2
RFFL-211ENST00000584541 CTXN1P60606 82 aa16.33■□□□□ 0.2
RFFL-211ENST00000584541 ESRRGP62508 458 aa16.33■□□□□ 0.2
RFFL-211ENST00000584541 FHL1Q13642 323 aa16.33■□□□□ 0.2
RFFL-211ENST00000584541 POU4F3Q15319 338 aa16.33■□□□□ 0.2
RFFL-211ENST00000584541 SLC36A3Q495N2 470 aa16.33■□□□□ 0.2
RFFL-211ENST00000584541 PLXDC2Q6UX71 529 aa16.33■□□□□ 0.2
RFFL-211ENST00000584541 KIF18BQ86Y91 864 aa16.33■□□□□ 0.2
RFFL-211ENST00000584541 OR9K2Q8NGE7 335 aa16.33■□□□□ 0.2
RFFL-211ENST00000584541 ABHD3Q8WU67 409 aa16.33■□□□□ 0.2
RFFL-211ENST00000584541 SAMD8Q96LT4 415 aa16.33■□□□□ 0.2
RFFL-211ENST00000584541 RNF122Q9H9V4 155 aa16.33■□□□□ 0.2
RFFL-211ENST00000584541 GP6Q9HCN6 339 aa16.33■□□□□ 0.2
RFFL-211ENST00000584541 IGSF10Q6WRI0 2623 aa16.33■□□□□ 0.2
RFFL-211ENST00000584541 DOCK7Q96N67 2140 aa16.33■□□□□ 0.2
RFFL-211ENST00000584541 MBD3L4A6NDZ8 208 aaPredicted RBP16.32■□□□□ 0.2
RFFL-211ENST00000584541 MBD3L3A6NE82 208 aaPredicted RBP16.32■□□□□ 0.2
RFFL-211ENST00000584541 MBD3L5A6NJ08 208 aaPredicted RBP16.32■□□□□ 0.2
RFFL-211ENST00000584541 AKAP8O43823 692 aaKnown RBP16.32■□□□□ 0.2
RFFL-211ENST00000584541 RAMP1O60894 148 aa16.32■□□□□ 0.2
RFFL-211ENST00000584541 MITFO75030 526 aaPredicted RBP16.32■□□□□ 0.2
RFFL-211ENST00000584541 C1QL1O75973 258 aa16.32■□□□□ 0.2
RFFL-211ENST00000584541 IL2RAP01589 272 aa16.32■□□□□ 0.2
RFFL-211ENST00000584541 ZNF26P17031 533 aaPredicted RBP16.32■□□□□ 0.2
RFFL-211ENST00000584541 CA7P43166 264 aa16.32■□□□□ 0.2
RFFL-211ENST00000584541 SLC16A1P53985 500 aa16.32■□□□□ 0.2
RFFL-211ENST00000584541 PER3P56645 1201 aa16.32■□□□□ 0.2
RFFL-211ENST00000584541 POU3F1Q03052 451 aaPredicted RBP16.32■□□□□ 0.2
RFFL-211ENST00000584541 MRPL49Q13405 166 aaKnown RBP16.32■□□□□ 0.2
RFFL-211ENST00000584541 SLC17A1Q14916 467 aa16.32■□□□□ 0.2
RFFL-211ENST00000584541 RTL6Q6ICC9 239 aa16.32■□□□□ 0.2
RFFL-211ENST00000584541 TMEM211Q6ICI0 200 aa16.32■□□□□ 0.2
RFFL-211ENST00000584541 C3P1Q6ZMU1 363 aa16.32■□□□□ 0.2
RFFL-211ENST00000584541 DPY19L2P2Q6ZN68 376 aa16.32■□□□□ 0.2
RFFL-211ENST00000584541 MED12LQ86YW9 2145 aa16.32■□□□□ 0.2
RFFL-211ENST00000584541 MBD3L2Q8NHZ7 208 aaPredicted RBP16.32■□□□□ 0.2
RFFL-211ENST00000584541 NRG4Q8WWG1 115 aa16.32■□□□□ 0.2
RFFL-211ENST00000584541 ZFP3Q96NJ6 502 aa16.32■□□□□ 0.2
RFFL-211ENST00000584541 RDH12Q96NR8 316 aa16.32■□□□□ 0.2
RFFL-211ENST00000584541 IFT27Q9BW83 186 aa16.32■□□□□ 0.2
RFFL-211ENST00000584541 TSSK6Q9BXA6 273 aa16.32■□□□□ 0.2
RFFL-211ENST00000584541 TEX12Q9BXU0 123 aa16.32■□□□□ 0.2
RFFL-211ENST00000584541 POLDIP3Q9BY77 421 aaKnown RBP16.32■□□□□ 0.2
RFFL-211ENST00000584541 RIBC2Q9H4K1 309 aa16.32■□□□□ 0.2
RFFL-211ENST00000584541 SMPD3Q9NY59 655 aaPredicted RBP16.32■□□□□ 0.2
RFFL-211ENST00000584541 B3GAT1Q9P2W7 334 aa16.32■□□□□ 0.2
RFFL-211ENST00000584541 IL20RAQ9UHF4 553 aa16.32■□□□□ 0.2
RFFL-211ENST00000584541 FAM215AQ9Y5M1 114 aa16.32■□□□□ 0.2
RFFL-211ENST00000584541 IGKV3D-15A0A087WSY6 115 aa16.31■□□□□ 0.2
RFFL-211ENST00000584541 ZNF716A6NP11 495 aa16.31■□□□□ 0.2
RFFL-211ENST00000584541 MCIDASD6RGH6 385 aa16.31■□□□□ 0.2
RFFL-211ENST00000584541 E9PLN8 166 aa16.31■□□□□ 0.2
RFFL-211ENST00000584541 TP53P04637 393 aaPredicted RBP16.31■□□□□ 0.2
RFFL-211ENST00000584541 CD14P08571 375 aa16.31■□□□□ 0.2
RFFL-211ENST00000584541 TIMP3P35625 211 aa16.31■□□□□ 0.2
RFFL-211ENST00000584541 DAP3P51398 398 aaKnown RBP16.31■□□□□ 0.2
RFFL-211ENST00000584541 RPS6KA3P51812 740 aa16.31■□□□□ 0.2
RFFL-211ENST00000584541 CRISP1P54107 249 aa16.31■□□□□ 0.2
RFFL-211ENST00000584541 FXYD6P3P58550 94 aa16.31■□□□□ 0.2
RFFL-211ENST00000584541 EIF2S3LQ2VIR3 472 aaKnown RBP16.31■□□□□ 0.2
RFFL-211ENST00000584541 CLEC12AQ5QGZ9 265 aa16.31■□□□□ 0.2
RFFL-211ENST00000584541 TMEM201Q5SNT2 666 aa16.31■□□□□ 0.2
RFFL-211ENST00000584541 EEF1A1P5Q5VTE0 462 aa16.31■□□□□ 0.2
RFFL-211ENST00000584541 THSD4Q6ZMP0 1018 aa16.31■□□□□ 0.2
RFFL-211ENST00000584541 CREB3L2Q70SY1 520 aa16.31■□□□□ 0.2
RFFL-211ENST00000584541 HDDC2Q7Z4H3 204 aa16.31■□□□□ 0.2
RFFL-211ENST00000584541 IGFN1Q86VF2 1251 aa16.31■□□□□ 0.2
RFFL-211ENST00000584541 LRRC75AQ8NAA5 344 aa16.31■□□□□ 0.2
RFFL-211ENST00000584541 C9orf106Q8NAJ2 232 aa16.31■□□□□ 0.2
RFFL-211ENST00000584541 OR2T33Q8NG76 320 aa16.31■□□□□ 0.2
RFFL-211ENST00000584541 GMPPAQ96IJ6 420 aaPredicted RBP16.31■□□□□ 0.2
RFFL-211ENST00000584541 GPX7Q96SL4 187 aaPredicted RBP16.31■□□□□ 0.2
RFFL-211ENST00000584541 VKORC1Q9BQB6 163 aa16.31■□□□□ 0.2
RFFL-211ENST00000584541 TTYH2Q9BSA4 534 aa16.31■□□□□ 0.2
RFFL-211ENST00000584541 KATNB1Q9BVA0 655 aa16.31■□□□□ 0.2
RFFL-211ENST00000584541 GABARAPL3Q9BY60 117 aa16.31■□□□□ 0.2
RFFL-211ENST00000584541 BCO1Q9HAY6 547 aa16.31■□□□□ 0.2
RFFL-211ENST00000584541 BAIAP2Q9UQB8 552 aa16.31■□□□□ 0.2
RFFL-211ENST00000584541 NPIPB13A6NJU9 1138 aa16.3■□□□□ 0.2
RFFL-211ENST00000584541 ZNF724A8MTY0 619 aa16.3■□□□□ 0.2
RFFL-211ENST00000584541 KDM4EB2RXH2 506 aaPredicted RBP16.3■□□□□ 0.2
RFFL-211ENST00000584541 NPIPB4C9JG80 1138 aa16.3■□□□□ 0.2
RFFL-211ENST00000584541 BCL10O95999 233 aa16.3■□□□□ 0.2
RFFL-211ENST00000584541 YES1P07947 543 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms