RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 PDLIM1O00151 329 aa12.74□□□□□ -0.37
SKA2-205ENST00000580541 CCL21O00585 134 aa12.74□□□□□ -0.37
SKA2-205ENST00000580541 CASQ2O14958 399 aaPredicted RBP12.74□□□□□ -0.37
SKA2-205ENST00000580541 ZNHIT1O43257 154 aa12.74□□□□□ -0.37
SKA2-205ENST00000580541 C1QL1O75973 258 aa12.74□□□□□ -0.37
SKA2-205ENST00000580541 TGM6O95932 706 aa12.74□□□□□ -0.37
SKA2-205ENST00000580541 UQCRC1P31930 480 aa12.74□□□□□ -0.37
SKA2-205ENST00000580541 AQP2P41181 271 aa12.74□□□□□ -0.37
SKA2-205ENST00000580541 DAPP51397 102 aa12.74□□□□□ -0.37
SKA2-205ENST00000580541 RPS6KA3P51812 740 aa12.74□□□□□ -0.37
SKA2-205ENST00000580541 RPS4XP62701 263 aaKnown RBP12.74□□□□□ -0.37
SKA2-205ENST00000580541 RPL18Q07020 188 aaKnown RBP12.74□□□□□ -0.37
SKA2-205ENST00000580541 PMPCAQ10713 525 aa12.74□□□□□ -0.37
SKA2-205ENST00000580541 SLC17A1Q14916 467 aa12.74□□□□□ -0.37
SKA2-205ENST00000580541 RIPPLY2Q5TAB7 128 aa12.74□□□□□ -0.37
SKA2-205ENST00000580541 FAM205BPQ63HN1 556 aa12.74□□□□□ -0.37
SKA2-205ENST00000580541 KDM4DQ6B0I6 523 aa12.74□□□□□ -0.37
SKA2-205ENST00000580541 ABLIM2Q6H8Q1 611 aa12.74□□□□□ -0.37
SKA2-205ENST00000580541 GALNT5Q7Z7M9 940 aa12.74□□□□□ -0.37
SKA2-205ENST00000580541 HS3ST5Q8IZT8 346 aa12.74□□□□□ -0.37
SKA2-205ENST00000580541 CBR4Q8N4T8 237 aa12.74□□□□□ -0.37
SKA2-205ENST00000580541 OR9K2Q8NGE7 335 aa12.74□□□□□ -0.37
SKA2-205ENST00000580541 OR13C2Q8NGS9 318 aa12.74□□□□□ -0.37
SKA2-205ENST00000580541 TEX47Q8TBZ9 253 aa12.74□□□□□ -0.37
SKA2-205ENST00000580541 FANK1Q8TC84 345 aa12.74□□□□□ -0.37
SKA2-205ENST00000580541 ADAD1Q96M93 576 aaKnown RBP12.74□□□□□ -0.37
SKA2-205ENST00000580541 NIPSNAP1Q9BPW8 284 aa12.74□□□□□ -0.37
SKA2-205ENST00000580541 BCO1Q9HAY6 547 aa12.74□□□□□ -0.37
SKA2-205ENST00000580541 SH3BGRL2Q9UJC5 107 aa12.74□□□□□ -0.37
SKA2-205ENST00000580541 MEMO1Q9Y316 297 aa12.74□□□□□ -0.37
SKA2-205ENST00000580541 MAGED1Q9Y5V3 778 aaPredicted RBP12.74□□□□□ -0.37
SKA2-205ENST00000580541 CDH10Q9Y6N8 788 aa12.74□□□□□ -0.37
SKA2-205ENST00000580541 PHF3Q92576 2039 aaKnown RBP12.74□□□□□ -0.37
SKA2-205ENST00000580541 KIAA1549Q9HCM3 1950 aa12.74□□□□□ -0.37
SKA2-205ENST00000580541 ZFYVE26Q68DK2 2539 aa12.73□□□□□ -0.37
SKA2-205ENST00000580541 NBASA2RRP1 2371 aa12.73□□□□□ -0.37
SKA2-205ENST00000580541 MYO7BQ6PIF6 2116 aa12.73□□□□□ -0.37
SKA2-205ENST00000580541 ARHGAP21Q5T5U3 1957 aa12.73□□□□□ -0.37
SKA2-205ENST00000580541 NPIPB13A6NJU9 1138 aa12.73□□□□□ -0.37
SKA2-205ENST00000580541 NPIPB4C9JG80 1138 aa12.73□□□□□ -0.37
SKA2-205ENST00000580541 MCIDASD6RGH6 385 aa12.73□□□□□ -0.37
SKA2-205ENST00000580541 MRPL33O75394 65 aaKnown RBP12.73□□□□□ -0.37
SKA2-205ENST00000580541 AQP8O94778 261 aa12.73□□□□□ -0.37
SKA2-205ENST00000580541 BCL10O95999 233 aa12.73□□□□□ -0.37
SKA2-205ENST00000580541 ALPLP05186 524 aa12.73□□□□□ -0.37
SKA2-205ENST00000580541 TMIGD3P0DMS9 266 aaPredicted RBP12.73□□□□□ -0.37
SKA2-205ENST00000580541 GLI4P10075 376 aa12.73□□□□□ -0.37
SKA2-205ENST00000580541 APEHP13798 732 aaKnown RBP12.73□□□□□ -0.37
SKA2-205ENST00000580541 NOS3P29474 1203 aa12.73□□□□□ -0.37
SKA2-205ENST00000580541 OPRM1P35372 400 aa12.73□□□□□ -0.37
SKA2-205ENST00000580541 P2RY4P51582 365 aa12.73□□□□□ -0.37
SKA2-205ENST00000580541 CTXN1P60606 82 aa12.73□□□□□ -0.37
SKA2-205ENST00000580541 PPP2R2BQ00005 443 aa12.73□□□□□ -0.37
SKA2-205ENST00000580541 MRPL49Q13405 166 aaKnown RBP12.73□□□□□ -0.37
SKA2-205ENST00000580541 IGFBP7Q16270 282 aa12.73□□□□□ -0.37
SKA2-205ENST00000580541 GPR139Q6DWJ6 353 aa12.73□□□□□ -0.37
SKA2-205ENST00000580541 RTL6Q6ICC9 239 aa12.73□□□□□ -0.37
SKA2-205ENST00000580541 KLHL17Q6TDP4 642 aa12.73□□□□□ -0.37
SKA2-205ENST00000580541 ZNF620Q6ZNG0 422 aa12.73□□□□□ -0.37
SKA2-205ENST00000580541 CREB3L2Q70SY1 520 aa12.73□□□□□ -0.37
SKA2-205ENST00000580541 MEX3DQ86XN8 651 aaKnown RBP12.73□□□□□ -0.37
SKA2-205ENST00000580541 ABHD3Q8WU67 409 aa12.73□□□□□ -0.37
SKA2-205ENST00000580541 RDH12Q96NR8 316 aa12.73□□□□□ -0.37
SKA2-205ENST00000580541 GPA33Q99795 319 aa12.73□□□□□ -0.37
SKA2-205ENST00000580541 IFT27Q9BW83 186 aa12.73□□□□□ -0.37
SKA2-205ENST00000580541 PRRG3Q9BZD7 231 aa12.73□□□□□ -0.37
SKA2-205ENST00000580541 OR52D1Q9H346 318 aa12.73□□□□□ -0.37
SKA2-205ENST00000580541 TXNIPQ9H3M7 391 aa12.73□□□□□ -0.37
SKA2-205ENST00000580541 SMURF2Q9HAU4 748 aa12.73□□□□□ -0.37
SKA2-205ENST00000580541 TBC1D23Q9NUY8 699 aa12.73□□□□□ -0.37
SKA2-205ENST00000580541 COQ3Q9NZJ6 369 aa12.73□□□□□ -0.37
SKA2-205ENST00000580541 KLHL13Q9P2N7 655 aa12.73□□□□□ -0.37
SKA2-205ENST00000580541 GRHPRQ9UBQ7 328 aa12.73□□□□□ -0.37
SKA2-205ENST00000580541 ZNF629Q9UEG4 869 aaPredicted RBP12.73□□□□□ -0.37
SKA2-205ENST00000580541 NOSIPQ9Y314 301 aaKnown RBP12.73□□□□□ -0.37
SKA2-205ENST00000580541 FAM215AQ9Y5M1 114 aa12.73□□□□□ -0.37
SKA2-205ENST00000580541 A6NIZ1 184 aa12.72□□□□□ -0.37
SKA2-205ENST00000580541 EI24O14681 340 aa12.72□□□□□ -0.37
SKA2-205ENST00000580541 IMPA2O14732 288 aa12.72□□□□□ -0.37
SKA2-205ENST00000580541 SS18L1O75177 396 aaPredicted RBP12.72□□□□□ -0.37
SKA2-205ENST00000580541 IL18BPO95998 194 aa12.72□□□□□ -0.37
SKA2-205ENST00000580541 HMGN1P05114 100 aa12.72□□□□□ -0.37
SKA2-205ENST00000580541 CD14P08571 375 aa12.72□□□□□ -0.37
SKA2-205ENST00000580541 NR2C1P13056 603 aa12.72□□□□□ -0.37
SKA2-205ENST00000580541 GNLYP22749 145 aa12.72□□□□□ -0.37
SKA2-205ENST00000580541 CTSSP25774 331 aa12.72□□□□□ -0.37
SKA2-205ENST00000580541 CEACAM8P31997 349 aaPredicted RBP12.72□□□□□ -0.37
SKA2-205ENST00000580541 SMSP52788 366 aa12.72□□□□□ -0.37
SKA2-205ENST00000580541 RAP1BP61224 184 aa12.72□□□□□ -0.37
SKA2-205ENST00000580541 RAP1AP62834 184 aa12.72□□□□□ -0.37
SKA2-205ENST00000580541 POU3F1Q03052 451 aaPredicted RBP12.72□□□□□ -0.37
SKA2-205ENST00000580541 LRRC36Q1X8D7 754 aa12.72□□□□□ -0.37
SKA2-205ENST00000580541 C4orf17Q53FE4 359 aa12.72□□□□□ -0.37
SKA2-205ENST00000580541 OGFRL1Q5TC84 451 aaPredicted RBP12.72□□□□□ -0.37
SKA2-205ENST00000580541 C3P1Q6ZMU1 363 aa12.72□□□□□ -0.37
SKA2-205ENST00000580541 SLC35D2Q76EJ3 337 aa12.72□□□□□ -0.37
SKA2-205ENST00000580541 FAM214BQ7L5A3 538 aa12.72□□□□□ -0.37
SKA2-205ENST00000580541 MED12LQ86YW9 2145 aa12.72□□□□□ -0.37
SKA2-205ENST00000580541 KDM8Q8N371 416 aa12.72□□□□□ -0.37
SKA2-205ENST00000580541 C9orf106Q8NAJ2 232 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms