RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 C20orf204Q6ZNR8 217 aa5.77□□□□□ -1.49
TRAF4-213ENST00000578917 NANOGNBQ7Z5D8 188 aa5.77□□□□□ -1.49
TRAF4-213ENST00000578917 PIGWQ7Z7B1 504 aa5.77□□□□□ -1.49
TRAF4-213ENST00000578917 EPHX4Q8IUS5 362 aa5.77□□□□□ -1.49
TRAF4-213ENST00000578917 RNF148Q8N7C7 305 aa5.77□□□□□ -1.49
TRAF4-213ENST00000578917 ANKS4BQ8N8V4 417 aa5.77□□□□□ -1.49
TRAF4-213ENST00000578917 SCAIQ8N9R8 606 aa5.77□□□□□ -1.49
TRAF4-213ENST00000578917 ANKK1Q8NFD2 765 aa5.77□□□□□ -1.49
TRAF4-213ENST00000578917 OR4D11Q8NGI4 311 aa5.77□□□□□ -1.49
TRAF4-213ENST00000578917 OR5J2Q8NH18 312 aa5.77□□□□□ -1.49
TRAF4-213ENST00000578917 OR6S1Q8NH40 331 aa5.77□□□□□ -1.49
TRAF4-213ENST00000578917 TMEM171Q8WVE6 324 aa5.77□□□□□ -1.49
TRAF4-213ENST00000578917 TMEM239Q8WW34 195 aa5.77□□□□□ -1.49
TRAF4-213ENST00000578917 AKAP1Q92667 903 aaKnown RBP eCLIP5.77□□□□□ -1.49
TRAF4-213ENST00000578917 GTPBP3Q969Y2 492 aaKnown RBP5.77□□□□□ -1.49
TRAF4-213ENST00000578917 RADILQ96JH8 1075 aa5.77□□□□□ -1.49
TRAF4-213ENST00000578917 HS6ST2Q96MM7 605 aa5.77□□□□□ -1.49
TRAF4-213ENST00000578917 MUS81Q96NY9 551 aa5.77□□□□□ -1.49
TRAF4-213ENST00000578917 MOGAT1Q96PD6 335 aa5.77□□□□□ -1.49
TRAF4-213ENST00000578917 HS3ST6Q96QI5 342 aa5.77□□□□□ -1.49
TRAF4-213ENST00000578917 CDRT15Q96T59 188 aa5.77□□□□□ -1.49
TRAF4-213ENST00000578917 EMC6Q9BV81 110 aa5.77□□□□□ -1.49
TRAF4-213ENST00000578917 PTDSS2Q9BVG9 487 aa5.77□□□□□ -1.49
TRAF4-213ENST00000578917 SLC19A3Q9BZV2 496 aa5.77□□□□□ -1.49
TRAF4-213ENST00000578917 POLR2J2Q9GZM3 115 aaKnown RBP5.77□□□□□ -1.49
TRAF4-213ENST00000578917 POLR2J3Q9H1A7 115 aaKnown RBP5.77□□□□□ -1.49
TRAF4-213ENST00000578917 MYLK2Q9H1R3 596 aa5.77□□□□□ -1.49
TRAF4-213ENST00000578917 FAIMQ9NVQ4 179 aa5.77□□□□□ -1.49
TRAF4-213ENST00000578917 NDE1Q9NXR1 346 aa5.77□□□□□ -1.49
TRAF4-213ENST00000578917 MRPL39Q9NYK5 338 aaKnown RBP5.77□□□□□ -1.49
TRAF4-213ENST00000578917 EGFL7Q9UHF1 273 aa5.77□□□□□ -1.49
TRAF4-213ENST00000578917 TAGLN3Q9UI15 199 aa5.77□□□□□ -1.49
TRAF4-213ENST00000578917 RPS6KA6Q9UK32 745 aa5.77□□□□□ -1.49
TRAF4-213ENST00000578917 RCE1Q9Y256 329 aa5.77□□□□□ -1.49
TRAF4-213ENST00000578917 MED31Q9Y3C7 131 aa5.77□□□□□ -1.49
TRAF4-213ENST00000578917 MAGED1Q9Y5V3 778 aaPredicted RBP5.77□□□□□ -1.49
TRAF4-213ENST00000578917 NIPBLQ6KC79 2804 aaeCLIP5.77□□□□□ -1.49
TRAF4-213ENST00000578917 MED12LQ86YW9 2145 aa5.77□□□□□ -1.49
TRAF4-213ENST00000578917 LOC102725191A0A1B0GVB3 256 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 A0A1W2PRG6 482 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 SLC35F4A4IF30 521 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 DPRXA6NFQ7 191 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 MCIDASD6RGH6 385 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 MS4A18H0YCH9 400 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 ABCD4O14678 606 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 HS3ST1O14792 307 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 SIAH2O43255 324 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 UPK3AO75631 287 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 ATE1O95260 518 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 BCL10O95999 233 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 PLAUP00749 431 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 BGLAPP02818 100 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 MT-ND1P03886 318 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 ITGA5P08648 1049 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 SAGP10523 405 aaPredicted RBP5.76□□□□□ -1.49
TRAF4-213ENST00000578917 THRBP10828 461 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 IFNGR1P15260 489 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 FUT1P19526 365 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 COX5AP20674 150 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 PTAFRP25105 342 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 RBM34P42696 430 aaKnown RBP5.76□□□□□ -1.49
TRAF4-213ENST00000578917 P2RY4P51582 365 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 FOXG1P55316 489 aaPredicted RBP5.76□□□□□ -1.49
TRAF4-213ENST00000578917 SH3BGRP55822 239 aaPredicted RBP5.76□□□□□ -1.49
TRAF4-213ENST00000578917 BIDP55957 195 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 NKX6-1P78426 367 aaPredicted RBP5.76□□□□□ -1.49
TRAF4-213ENST00000578917 ARF1P84077 181 aaKnown RBP5.76□□□□□ -1.49
TRAF4-213ENST00000578917 LTBQ06643 244 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 LGALS3BPQ08380 585 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 CAMK2DQ13557 499 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 TRAM2Q15035 370 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 TAF11Q15544 211 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 MS4A18Q3C1V0 323 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 IFI44LQ53G44 452 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 SAMD4BQ5PRF9 694 aaKnown RBP5.76□□□□□ -1.49
TRAF4-213ENST00000578917 NCMAPQ5T1S8 102 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 GLYATQ6IB77 296 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 ADAM5Q6NVV9 412 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 ANKRD16Q6P6B7 361 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 C16orf89Q6UX73 402 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 LINC00114Q6XXX2 140 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 PXKQ7Z7A4 578 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 VTCN1Q7Z7D3 282 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 C17orf78Q8N4C9 275 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 LRRC17Q8N6Y2 441 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 CCDC197Q8NCU1 140 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 ADPRHL1Q8NDY3 354 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 C1orf162Q8NEQ5 155 aaPredicted RBP5.76□□□□□ -1.49
TRAF4-213ENST00000578917 SMAP2Q8WU79 429 aaPredicted RBP5.76□□□□□ -1.49
TRAF4-213ENST00000578917 TMEM255BQ8WV15 326 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 GEMIN6Q8WXD5 167 aaKnown RBP5.76□□□□□ -1.49
TRAF4-213ENST00000578917 FBXW5Q969U6 566 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 MCUR1Q96AQ8 359 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 MBD6Q96DN6 1003 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 SGTBQ96EQ0 304 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 NSL1Q96IY1 281 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 TXNDC15Q96J42 360 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 ALKBH3Q96Q83 286 aaPredicted RBP5.76□□□□□ -1.49
TRAF4-213ENST00000578917 ALPK1Q96QP1 1244 aa5.76□□□□□ -1.49
TRAF4-213ENST00000578917 OR2M2Q96R28 347 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms