RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 B3GAT1Q9P2W7 334 aa13□□□□□ -0.33
RN7SL560P-201ENST00000577943 CRNNQ9UBG3 495 aaPredicted RBP13□□□□□ -0.33
RN7SL560P-201ENST00000577943 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13□□□□□ -0.33
RN7SL560P-201ENST00000577943 TESQ9UGI8 421 aaKnown RBP13□□□□□ -0.33
RN7SL560P-201ENST00000577943 SLC13A4Q9UKG4 626 aa13□□□□□ -0.33
RN7SL560P-201ENST00000577943 CUBNO60494 3623 aa13□□□□□ -0.33
RN7SL560P-201ENST00000577943 PRORSD1PA6NEY8 169 aa12.99□□□□□ -0.33
RN7SL560P-201ENST00000577943 RPL36A-HNRNPH2H7BZ11 118 aa12.99□□□□□ -0.33
RN7SL560P-201ENST00000577943 FZD7O75084 574 aa12.99□□□□□ -0.33
RN7SL560P-201ENST00000577943 SERPINB7O75635 380 aa12.99□□□□□ -0.33
RN7SL560P-201ENST00000577943 NQO1P15559 274 aaKnown RBP12.99□□□□□ -0.33
RN7SL560P-201ENST00000577943 GPX2P18283 190 aa12.99□□□□□ -0.33
RN7SL560P-201ENST00000577943 USF1P22415 310 aaPredicted RBP12.99□□□□□ -0.33
RN7SL560P-201ENST00000577943 AQP1P29972 269 aa12.99□□□□□ -0.33
RN7SL560P-201ENST00000577943 PDLIM4P50479 330 aa12.99□□□□□ -0.33
RN7SL560P-201ENST00000577943 RGS8P57771 180 aaPredicted RBP12.99□□□□□ -0.33
RN7SL560P-201ENST00000577943 VLDLRP98155 873 aa12.99□□□□□ -0.33
RN7SL560P-201ENST00000577943 MFSD13AQ14CX5 517 aa12.99□□□□□ -0.33
RN7SL560P-201ENST00000577943 CEACAM16Q2WEN9 425 aa12.99□□□□□ -0.33
RN7SL560P-201ENST00000577943 FAM91A1Q658Y4 838 aa12.99□□□□□ -0.33
RN7SL560P-201ENST00000577943 SLC46A3Q7Z3Q1 461 aa12.99□□□□□ -0.33
RN7SL560P-201ENST00000577943 UEVLDQ8IX04 471 aa12.99□□□□□ -0.33
RN7SL560P-201ENST00000577943 PIK3C3Q8NEB9 887 aa12.99□□□□□ -0.33
RN7SL560P-201ENST00000577943 ANKK1Q8NFD2 765 aa12.99□□□□□ -0.33
RN7SL560P-201ENST00000577943 BHLHE22Q8NFJ8 381 aaPredicted RBP12.99□□□□□ -0.33
RN7SL560P-201ENST00000577943 SORCS2Q96PQ0 1159 aa12.99□□□□□ -0.33
RN7SL560P-201ENST00000577943 EPYCQ99645 322 aa12.99□□□□□ -0.33
RN7SL560P-201ENST00000577943 VRK1Q99986 396 aaPredicted RBP12.99□□□□□ -0.33
RN7SL560P-201ENST00000577943 NELFAQ9H3P2 528 aa12.99□□□□□ -0.33
RN7SL560P-201ENST00000577943 IKZF5Q9H5V7 419 aa12.99□□□□□ -0.33
RN7SL560P-201ENST00000577943 TMEM38AQ9H6F2 299 aa12.99□□□□□ -0.33
RN7SL560P-201ENST00000577943 CRLF2Q9HC73 371 aa12.99□□□□□ -0.33
RN7SL560P-201ENST00000577943 GPR35Q9HC97 309 aa12.99□□□□□ -0.33
RN7SL560P-201ENST00000577943 SLC52A3Q9NQ40 469 aa12.99□□□□□ -0.33
RN7SL560P-201ENST00000577943 GMEB1Q9Y692 573 aa12.99□□□□□ -0.33
RN7SL560P-201ENST00000577943 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.99□□□□□ -0.33
RN7SL560P-201ENST00000577943 ATRQ13535 2644 aa12.98□□□□□ -0.33
RN7SL560P-201ENST00000577943 IGKV1D-42A0A075B6H8 117 aa12.98□□□□□ -0.33
RN7SL560P-201ENST00000577943 A0A087WUJ7 227 aa12.98□□□□□ -0.33
RN7SL560P-201ENST00000577943 TRBV5-3A0A0A0MS03 114 aa12.98□□□□□ -0.33
RN7SL560P-201ENST00000577943 B9A039 149 aa12.98□□□□□ -0.33
RN7SL560P-201ENST00000577943 PDE5AO76074 875 aa12.98□□□□□ -0.33
RN7SL560P-201ENST00000577943 IGKV3-15P01624 115 aa12.98□□□□□ -0.33
RN7SL560P-201ENST00000577943 IGLV1-44P01699 117 aa12.98□□□□□ -0.33
RN7SL560P-201ENST00000577943 OR4A8P0C604 315 aa12.98□□□□□ -0.33
RN7SL560P-201ENST00000577943 CALCRP30988 508 aa12.98□□□□□ -0.33
RN7SL560P-201ENST00000577943 CAPZA2P47755 286 aa12.98□□□□□ -0.33
RN7SL560P-201ENST00000577943 ATP4BP51164 291 aa12.98□□□□□ -0.33
RN7SL560P-201ENST00000577943 LSM11P83369 360 aaKnown RBP eCLIP12.98□□□□□ -0.33
RN7SL560P-201ENST00000577943 SQLEQ14534 574 aa12.98□□□□□ -0.33
RN7SL560P-201ENST00000577943 OR1Q1Q15612 314 aa12.98□□□□□ -0.33
RN7SL560P-201ENST00000577943 ADIPOQQ15848 244 aa12.98□□□□□ -0.33
RN7SL560P-201ENST00000577943 CARTPTQ16568 116 aa12.98□□□□□ -0.33
RN7SL560P-201ENST00000577943 CYB5R2Q6BCY4 276 aa12.98□□□□□ -0.33
RN7SL560P-201ENST00000577943 ARMC8Q8IUR7 673 aa12.98□□□□□ -0.33
RN7SL560P-201ENST00000577943 FAM169BQ8N8A8 192 aa12.98□□□□□ -0.33
RN7SL560P-201ENST00000577943 HIPK4Q8NE63 616 aa12.98□□□□□ -0.33
RN7SL560P-201ENST00000577943 OR4F15Q8NGB8 312 aa12.98□□□□□ -0.33
RN7SL560P-201ENST00000577943 SPATA3Q8NHX4 192 aa12.98□□□□□ -0.33
RN7SL560P-201ENST00000577943 ZNF837Q96EG3 531 aaPredicted RBP12.98□□□□□ -0.33
RN7SL560P-201ENST00000577943 ATP6V1G3Q96LB4 118 aa12.98□□□□□ -0.33
RN7SL560P-201ENST00000577943 OR2M2Q96R28 347 aa12.98□□□□□ -0.33
RN7SL560P-201ENST00000577943 KCNK17Q96T54 332 aa12.98□□□□□ -0.33
RN7SL560P-201ENST00000577943 PIMREGQ9BSJ6 248 aa12.98□□□□□ -0.33
RN7SL560P-201ENST00000577943 ASPNQ9BXN1 380 aa12.98□□□□□ -0.33
RN7SL560P-201ENST00000577943 SEC61A2Q9H9S3 476 aa12.98□□□□□ -0.33
RN7SL560P-201ENST00000577943 KLHL14Q9P2G3 628 aa12.98□□□□□ -0.33
RN7SL560P-201ENST00000577943 ANGPT4Q9Y264 503 aa12.98□□□□□ -0.33
RN7SL560P-201ENST00000577943 FBN1P35555 2871 aaKnown RBP12.98□□□□□ -0.33
RN7SL560P-201ENST00000577943 COL6A5A8TX70 2615 aa12.97□□□□□ -0.33
RN7SL560P-201ENST00000577943 A0A0B4J2E0 115 aa12.97□□□□□ -0.33
RN7SL560P-201ENST00000577943 LOC102725191A0A1B0GVB3 256 aa12.97□□□□□ -0.33
RN7SL560P-201ENST00000577943 A0A1B0GX12 115 aa12.97□□□□□ -0.33
RN7SL560P-201ENST00000577943 VSTM5A8MXK1 200 aa12.97□□□□□ -0.33
RN7SL560P-201ENST00000577943 MS4A18H0YCH9 400 aa12.97□□□□□ -0.33
RN7SL560P-201ENST00000577943 M0R3G1 203 aa12.97□□□□□ -0.33
RN7SL560P-201ENST00000577943 TRAF3IP2O43734 574 aaPredicted RBP12.97□□□□□ -0.33
RN7SL560P-201ENST00000577943 CELA3BP08861 270 aa12.97□□□□□ -0.33
RN7SL560P-201ENST00000577943 CBR1P16152 277 aa12.97□□□□□ -0.33
RN7SL560P-201ENST00000577943 IDH3GP51553 393 aaPredicted RBP12.97□□□□□ -0.33
RN7SL560P-201ENST00000577943 NPRL3Q12980 569 aa12.97□□□□□ -0.33
RN7SL560P-201ENST00000577943 GGTLC2Q14390 218 aa12.97□□□□□ -0.33
RN7SL560P-201ENST00000577943 MS4A18Q3C1V0 323 aa12.97□□□□□ -0.33
RN7SL560P-201ENST00000577943 TTMPQ5BVD1 217 aa12.97□□□□□ -0.33
RN7SL560P-201ENST00000577943 CARD17Q5XLA6 110 aa12.97□□□□□ -0.33
RN7SL560P-201ENST00000577943 RANBP3LQ86VV4 465 aaPredicted RBP12.97□□□□□ -0.33
RN7SL560P-201ENST00000577943 ANKS4BQ8N8V4 417 aa12.97□□□□□ -0.33
RN7SL560P-201ENST00000577943 ADPRHL1Q8NDY3 354 aa12.97□□□□□ -0.33
RN7SL560P-201ENST00000577943 OR6S1Q8NH40 331 aa12.97□□□□□ -0.33
RN7SL560P-201ENST00000577943 RABEP2Q9H5N1 569 aa12.97□□□□□ -0.33
RN7SL560P-201ENST00000577943 CDC42EP3Q9UKI2 254 aa12.97□□□□□ -0.33
RN7SL560P-201ENST00000577943 CORINQ9Y5Q5 1042 aa12.97□□□□□ -0.33
RN7SL560P-201ENST00000577943 ZNF99A8MXY4 864 aaPredicted RBP12.96□□□□□ -0.33
RN7SL560P-201ENST00000577943 NDUFS8O00217 210 aa12.96□□□□□ -0.33
RN7SL560P-201ENST00000577943 SEC14L2O76054 403 aa12.96□□□□□ -0.33
RN7SL560P-201ENST00000577943 BGLAPP02818 100 aa12.96□□□□□ -0.33
RN7SL560P-201ENST00000577943 IGHV4-31P0DP07 118 aa12.96□□□□□ -0.33
RN7SL560P-201ENST00000577943 HLA-DOBP13765 273 aa12.96□□□□□ -0.33
RN7SL560P-201ENST00000577943 ZNF16P17020 682 aaPredicted RBP12.96□□□□□ -0.33
RN7SL560P-201ENST00000577943 ARR3P36575 388 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms