RNA–Protein interactions for RNA: ENST00000577802.1

CDK5RAP3-205, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 415 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-205ENST00000577802 RNFT1Q5M7Z0 435 aa11.9□□□□□ -0.5
CDK5RAP3-205ENST00000577802 RBM48Q5RL73 367 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP3-205ENST00000577802 SLC25A30Q5SVS4 291 aa11.9□□□□□ -0.5
CDK5RAP3-205ENST00000577802 TMEM236Q5W0B7 351 aa11.9□□□□□ -0.5
CDK5RAP3-205ENST00000577802 THSD4Q6ZMP0 1018 aa11.9□□□□□ -0.5
CDK5RAP3-205ENST00000577802 Q6ZPB1 254 aaPredicted RBP11.9□□□□□ -0.5
CDK5RAP3-205ENST00000577802 SIAH3Q8IW03 269 aa11.9□□□□□ -0.5
CDK5RAP3-205ENST00000577802 OR4Q3Q8NH05 313 aa11.9□□□□□ -0.5
CDK5RAP3-205ENST00000577802 MOSPD2Q8NHP6 518 aa11.9□□□□□ -0.5
CDK5RAP3-205ENST00000577802 FNDC8Q8TC99 324 aa11.9□□□□□ -0.5
CDK5RAP3-205ENST00000577802 HDAC2Q92769 488 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP3-205ENST00000577802 GPR137Q96N19 417 aa11.9□□□□□ -0.5
CDK5RAP3-205ENST00000577802 PRDM14Q9GZV8 571 aa11.9□□□□□ -0.5
CDK5RAP3-205ENST00000577802 TXNIPQ9H3M7 391 aa11.9□□□□□ -0.5
CDK5RAP3-205ENST00000577802 ZNF71Q9NQZ8 489 aaPredicted RBP11.9□□□□□ -0.5
CDK5RAP3-205ENST00000577802 SCN3BQ9NY72 215 aa11.9□□□□□ -0.5
CDK5RAP3-205ENST00000577802 TAS2R5Q9NYW4 299 aa11.9□□□□□ -0.5
CDK5RAP3-205ENST00000577802 IL20RAQ9UHF4 553 aa11.9□□□□□ -0.5
CDK5RAP3-205ENST00000577802 CAMK2AQ9UQM7 478 aa11.9□□□□□ -0.5
CDK5RAP3-205ENST00000577802 RNF6Q9Y252 685 aa11.9□□□□□ -0.5
CDK5RAP3-205ENST00000577802 ZNF175Q9Y473 711 aa11.9□□□□□ -0.5
CDK5RAP3-205ENST00000577802 IER3IP1Q9Y5U9 82 aa11.9□□□□□ -0.5
CDK5RAP3-205ENST00000577802 LIPGQ9Y5X9 500 aa11.9□□□□□ -0.5
CDK5RAP3-205ENST00000577802 FRYQ5TBA9 3013 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 TEX13CA0A0J9YWL9 993 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 CENPBD1B2RD01 187 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 PRR23D1E9PI22 279 aaPredicted RBP11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 K7EM74 188 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 GPR171O14626 319 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 AHCYL1O43865 530 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 CXCL13O43927 109 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 BCL10O95999 233 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 OPN1LWP04000 364 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 F13BP05160 661 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 IGFBP1P08833 259 aaPredicted RBP11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 PRR23D2P0DMB1 279 aaPredicted RBP11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 ACVR2AP27037 513 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 PTGER4P35408 488 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 ISL1P61371 349 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 ERVK-25P63136 954 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 H3F3AP84243 136 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 LGALS3BPQ08380 585 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 CD47Q08722 323 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 ITGADQ13349 1161 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 RNPS1Q15287 305 aaKnown RBP11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 OCLNQ16625 522 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 NADK2Q4G0N4 442 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 GXYLT1Q4G148 440 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 TMEM201Q5SNT2 666 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 ARMC4Q5T2S8 1044 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 LCN1P1Q5VSP4 162 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 NXNL2Q5VZ03 156 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 GTF2IRD2BQ6EKJ0 949 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 ABLIM2Q6H8Q1 611 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 DNM1P34Q6PK57 102 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 FAM122BQ7Z309 247 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 GPAT4Q86UL3 456 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 GTF2IRD2Q86UP8 949 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 IGFN1Q86VF2 1251 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 ZNF786Q8N393 782 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 FAM26EQ8N5C1 309 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 TMEM99Q8N816 258 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 TCEANCQ8N8B7 351 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 LRRC75AQ8NAA5 344 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 RHOXF1Q8NHV9 184 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 FBLIM1Q8WUP2 373 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 SLC39A7Q92504 469 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 ZNF566Q969W8 418 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 DNAJA3Q96EY1 480 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 WBP1Q96G27 269 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 TAAR6Q96RI8 345 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 PRRG4Q9BZD6 226 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 CCNB1IP1Q9NPC3 277 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 RASSF1Q9NS23 344 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 H2AFY2Q9P0M6 372 aaPredicted RBP11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 KLHL9Q9P2J3 617 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 MYRFQ9Y2G1 1151 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 MPDZO75970 2070 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 IGF2RP11717 2491 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 PCNX3Q9H6A9 2034 aa11.89□□□□□ -0.51
CDK5RAP3-205ENST00000577802 KIAA1549Q9HCM3 1950 aa11.88□□□□□ -0.51
CDK5RAP3-205ENST00000577802 SMAD9O15198 467 aaKnown RBP11.88□□□□□ -0.51
CDK5RAP3-205ENST00000577802 PRODHO43272 600 aa11.88□□□□□ -0.51
CDK5RAP3-205ENST00000577802 TLX2O43763 284 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP3-205ENST00000577802 SERPINI2O75830 405 aa11.88□□□□□ -0.51
CDK5RAP3-205ENST00000577802 CCDC159P0C7I6 412 aa11.88□□□□□ -0.51
CDK5RAP3-205ENST00000577802 CENPAP49450 140 aa11.88□□□□□ -0.51
CDK5RAP3-205ENST00000577802 STARP49675 285 aa11.88□□□□□ -0.51
CDK5RAP3-205ENST00000577802 GABARAPL2P60520 117 aa11.88□□□□□ -0.51
CDK5RAP3-205ENST00000577802 SRYQ05066 204 aa11.88□□□□□ -0.51
CDK5RAP3-205ENST00000577802 RBPJQ06330 500 aa11.88□□□□□ -0.51
CDK5RAP3-205ENST00000577802 C19orf57Q0VDD7 668 aa11.88□□□□□ -0.51
CDK5RAP3-205ENST00000577802 TMED1Q13445 227 aa11.88□□□□□ -0.51
CDK5RAP3-205ENST00000577802 ACKR1Q16570 336 aa11.88□□□□□ -0.51
CDK5RAP3-205ENST00000577802 KCTD21Q4G0X4 260 aa11.88□□□□□ -0.51
CDK5RAP3-205ENST00000577802 ACSM5Q6NUN0 579 aa11.88□□□□□ -0.51
CDK5RAP3-205ENST00000577802 SLC35D2Q76EJ3 337 aa11.88□□□□□ -0.51
CDK5RAP3-205ENST00000577802 FCRLAQ7L513 359 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms