RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 ZNF704Q6ZNC4 412 aaPredicted RBP20.66■□□□□ 0.9
SNF8-217ENST00000576353 FKBP9P1Q75LS8 142 aa20.66■□□□□ 0.9
SNF8-217ENST00000576353 HIST3H2AQ7L7L0 130 aa20.66■□□□□ 0.9
SNF8-217ENST00000576353 PXKQ7Z7A4 578 aa20.66■□□□□ 0.9
SNF8-217ENST00000576353 VTCN1Q7Z7D3 282 aa20.66■□□□□ 0.9
SNF8-217ENST00000576353 PGAM4Q8N0Y7 254 aa20.66■□□□□ 0.9
SNF8-217ENST00000576353 GEMIN6Q8WXD5 167 aaKnown RBP20.66■□□□□ 0.9
SNF8-217ENST00000576353 HIST1H2ACQ93077 130 aa20.66■□□□□ 0.9
SNF8-217ENST00000576353 PRRC1Q96M27 445 aa20.66■□□□□ 0.9
SNF8-217ENST00000576353 FOXC2Q99958 501 aa20.66■□□□□ 0.9
SNF8-217ENST00000576353 UBTD1Q9HAC8 227 aa20.66■□□□□ 0.9
SNF8-217ENST00000576353 RPS6KA6Q9UK32 745 aa20.66■□□□□ 0.9
SNF8-217ENST00000576353 TRAF3IP2O43734 574 aaPredicted RBP20.65■□□□□ 0.9
SNF8-217ENST00000576353 HPRP00739 348 aa20.65■□□□□ 0.9
SNF8-217ENST00000576353 CD3EP07766 207 aa20.65■□□□□ 0.9
SNF8-217ENST00000576353 NCK1P16333 377 aa20.65■□□□□ 0.9
SNF8-217ENST00000576353 AHCYP23526 432 aa20.65■□□□□ 0.9
SNF8-217ENST00000576353 HOXC12P31275 282 aa20.65■□□□□ 0.9
SNF8-217ENST00000576353 KRT72Q14CN4 511 aa20.65■□□□□ 0.9
SNF8-217ENST00000576353 SEZ6L2Q6UXD5 910 aa20.65■□□□□ 0.9
SNF8-217ENST00000576353 C20orf204Q6ZNR8 217 aa20.65■□□□□ 0.9
SNF8-217ENST00000576353 NKAIN4Q8IVV8 208 aa20.65■□□□□ 0.9
SNF8-217ENST00000576353 CCDC197Q8NCU1 140 aa20.65■□□□□ 0.9
SNF8-217ENST00000576353 ANKK1Q8NFD2 765 aa20.65■□□□□ 0.9
SNF8-217ENST00000576353 OR52N5Q8NH56 324 aa20.65■□□□□ 0.9
SNF8-217ENST00000576353 TMEM239Q8WW34 195 aa20.65■□□□□ 0.9
SNF8-217ENST00000576353 ZNF229Q9UJW7 825 aa20.65■□□□□ 0.9
SNF8-217ENST00000576353 UPK3AO75631 287 aa20.64■□□□□ 0.89
SNF8-217ENST00000576353 IGF2P01344 180 aa20.64■□□□□ 0.89
SNF8-217ENST00000576353 MT-ND1P03886 318 aa20.64■□□□□ 0.89
SNF8-217ENST00000576353 ADORA3P0DMS8 318 aa20.64■□□□□ 0.89
SNF8-217ENST00000576353 MXRA7P84157 204 aa20.64■□□□□ 0.89
SNF8-217ENST00000576353 POU3F1Q03052 451 aaPredicted RBP20.64■□□□□ 0.89
SNF8-217ENST00000576353 TESK1Q15569 626 aa20.64■□□□□ 0.89
SNF8-217ENST00000576353 GLYATQ6IB77 296 aa20.64■□□□□ 0.89
SNF8-217ENST00000576353 HMBOX1Q6NT76 420 aa20.64■□□□□ 0.89
SNF8-217ENST00000576353 C16orf89Q6UX73 402 aa20.64■□□□□ 0.89
SNF8-217ENST00000576353 PIK3C3Q8NEB9 887 aa20.64■□□□□ 0.89
SNF8-217ENST00000576353 TMEM255BQ8WV15 326 aa20.64■□□□□ 0.89
SNF8-217ENST00000576353 BOD1Q96IK1 185 aa20.64■□□□□ 0.89
SNF8-217ENST00000576353 HSH2DQ96JZ2 352 aa20.64■□□□□ 0.89
SNF8-217ENST00000576353 OR2M2Q96R28 347 aa20.64■□□□□ 0.89
SNF8-217ENST00000576353 MEPEQ9NQ76 525 aaPredicted RBP20.64■□□□□ 0.89
SNF8-217ENST00000576353 SLC17A5Q9NRA2 495 aa20.64■□□□□ 0.89
SNF8-217ENST00000576353 EGFL7Q9UHF1 273 aa20.64■□□□□ 0.89
SNF8-217ENST00000576353 A4GNTQ9UNA3 340 aa20.64■□□□□ 0.89
SNF8-217ENST00000576353 AMDHD2Q9Y303 409 aa20.64■□□□□ 0.89
SNF8-217ENST00000576353 RNF115Q9Y4L5 304 aa20.64■□□□□ 0.89
SNF8-217ENST00000576353 SLC25A15Q9Y619 301 aa20.64■□□□□ 0.89
SNF8-217ENST00000576353 OTOGQ6ZRI0 2925 aa20.64■□□□□ 0.89
SNF8-217ENST00000576353 HRNRQ86YZ3 2850 aaPredicted RBP20.64■□□□□ 0.89
SNF8-217ENST00000576353 UMPSP11172 480 aa20.63■□□□□ 0.89
SNF8-217ENST00000576353 HLA-DOBP13765 273 aa20.63■□□□□ 0.89
SNF8-217ENST00000576353 CDH2P19022 906 aaPredicted RBP20.63■□□□□ 0.89
SNF8-217ENST00000576353 CD53P19397 219 aa20.63■□□□□ 0.89
SNF8-217ENST00000576353 LGALS3BPQ08380 585 aa20.63■□□□□ 0.89
SNF8-217ENST00000576353 ZP4Q12836 540 aa20.63■□□□□ 0.89
SNF8-217ENST00000576353 SAMD4BQ5PRF9 694 aaKnown RBP20.63■□□□□ 0.89
SNF8-217ENST00000576353 KLHL17Q6TDP4 642 aa20.63■□□□□ 0.89
SNF8-217ENST00000576353 GPR137CQ8N3F9 429 aa20.63■□□□□ 0.89
SNF8-217ENST00000576353 FITM2Q8N6M3 262 aa20.63■□□□□ 0.89
SNF8-217ENST00000576353 RNF148Q8N7C7 305 aa20.63■□□□□ 0.89
SNF8-217ENST00000576353 ALKBH3Q96Q83 286 aaPredicted RBP20.63■□□□□ 0.89
SNF8-217ENST00000576353 ALPK1Q96QP1 1244 aa20.63■□□□□ 0.89
SNF8-217ENST00000576353 CDRT15Q96T59 188 aa20.63■□□□□ 0.89
SNF8-217ENST00000576353 FNDC11Q9BVV2 318 aa20.63■□□□□ 0.89
SNF8-217ENST00000576353 ADAM21Q9UKJ8 722 aa20.63■□□□□ 0.89
SNF8-217ENST00000576353 MED31Q9Y3C7 131 aa20.63■□□□□ 0.89
SNF8-217ENST00000576353 HTR3EA5X5Y0 456 aa20.62■□□□□ 0.89
SNF8-217ENST00000576353 DPRXA6NFQ7 191 aa20.62■□□□□ 0.89
SNF8-217ENST00000576353 ZNF726A6NNF4 738 aa20.62■□□□□ 0.89
SNF8-217ENST00000576353 PLAUP00749 431 aa20.62■□□□□ 0.89
SNF8-217ENST00000576353 ASAH2BP0C7U1 165 aa20.62■□□□□ 0.89
SNF8-217ENST00000576353 HSD17B1P14061 328 aa20.62■□□□□ 0.89
SNF8-217ENST00000576353 UGT2B15P54855 530 aa20.62■□□□□ 0.89
SNF8-217ENST00000576353 SH3BGRP55822 239 aaPredicted RBP20.62■□□□□ 0.89
SNF8-217ENST00000576353 PRPS1P60891 318 aa20.62■□□□□ 0.89
SNF8-217ENST00000576353 SLC25A3Q00325 362 aa20.62■□□□□ 0.89
SNF8-217ENST00000576353 ROR2Q01974 943 aaKnown RBP20.62■□□□□ 0.89
SNF8-217ENST00000576353 BSPH1Q075Z2 132 aa20.62■□□□□ 0.89
SNF8-217ENST00000576353 DEFB113Q30KQ7 82 aa20.62■□□□□ 0.89
SNF8-217ENST00000576353 KLHL24Q6TFL4 600 aa20.62■□□□□ 0.89
SNF8-217ENST00000576353 TMEM108Q6UXF1 575 aa20.62■□□□□ 0.89
SNF8-217ENST00000576353 NHLRC1Q6VVB1 395 aa20.62■□□□□ 0.89
SNF8-217ENST00000576353 SPNS3Q6ZMD2 512 aa20.62■□□□□ 0.89
SNF8-217ENST00000576353 TMEM123Q8N131 208 aa20.62■□□□□ 0.89
SNF8-217ENST00000576353 LRRC17Q8N6Y2 441 aa20.62■□□□□ 0.89
SNF8-217ENST00000576353 WDR31Q8NA23 367 aa20.62■□□□□ 0.89
SNF8-217ENST00000576353 PIGTQ969N2 578 aa20.62■□□□□ 0.89
SNF8-217ENST00000576353 SGTBQ96EQ0 304 aa20.62■□□□□ 0.89
SNF8-217ENST00000576353 CXXC4Q9H2H0 198 aa20.62■□□□□ 0.89
SNF8-217ENST00000576353 OBP2BQ9NPH6 170 aa20.62■□□□□ 0.89
SNF8-217ENST00000576353 SAMD4AQ9UPU9 718 aaKnown RBP20.62■□□□□ 0.89
SNF8-217ENST00000576353 MAGED1Q9Y5V3 778 aaPredicted RBP20.62■□□□□ 0.89
SNF8-217ENST00000576353 A0A1W2PR80 420 aa20.61■□□□□ 0.89
SNF8-217ENST00000576353 C11orf98E9PRG8 122 aa20.61■□□□□ 0.89
SNF8-217ENST00000576353 RPL36A-HNRNPH2H7BZ11 118 aa20.61■□□□□ 0.89
SNF8-217ENST00000576353 CLOCKO15516 846 aa20.61■□□□□ 0.89
SNF8-217ENST00000576353 WNT11O96014 354 aa20.61■□□□□ 0.89
SNF8-217ENST00000576353 FUT1P19526 365 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 144.9 ms