RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 ALDH3B1P43353 468 aa7.72□□□□□ -1.17
SMG6-218ENST00000575454 CLDN17P56750 224 aa7.72□□□□□ -1.17
SMG6-218ENST00000575454 PLAURQ03405 335 aa7.72□□□□□ -1.17
SMG6-218ENST00000575454 FUT5Q11128 374 aa7.72□□□□□ -1.17
SMG6-218ENST00000575454 PCLAFQ15004 111 aa7.72□□□□□ -1.17
SMG6-218ENST00000575454 MOGQ16653 247 aa7.72□□□□□ -1.17
SMG6-218ENST00000575454 GSG1Q2KHT4 349 aa7.72□□□□□ -1.17
SMG6-218ENST00000575454 DPY19L1Q2PZI1 675 aa7.72□□□□□ -1.17
SMG6-218ENST00000575454 CEACAM16Q2WEN9 425 aa7.72□□□□□ -1.17
SMG6-218ENST00000575454 GLIPR1L2Q4G1C9 344 aa7.72□□□□□ -1.17
SMG6-218ENST00000575454 MIDNQ504T8 468 aa7.72□□□□□ -1.17
SMG6-218ENST00000575454 LIN52Q52LA3 116 aa7.72□□□□□ -1.17
SMG6-218ENST00000575454 MRPL2Q5T653 305 aaKnown RBP7.72□□□□□ -1.17
SMG6-218ENST00000575454 DCAF12L2Q5VW00 463 aa7.72□□□□□ -1.17
SMG6-218ENST00000575454 C1orf229Q6ZS94 237 aaPredicted RBP7.72□□□□□ -1.17
SMG6-218ENST00000575454 HMGN2P46Q86SG4 172 aa7.72□□□□□ -1.17
SMG6-218ENST00000575454 CARM1Q86X55 608 aa7.72□□□□□ -1.17
SMG6-218ENST00000575454 CADM2Q8N3J6 435 aa7.72□□□□□ -1.17
SMG6-218ENST00000575454 ZDHHC22Q8N966 263 aa7.72□□□□□ -1.17
SMG6-218ENST00000575454 SYT14Q8NB59 555 aa7.72□□□□□ -1.17
SMG6-218ENST00000575454 NOA1Q8NC60 698 aaKnown RBP7.72□□□□□ -1.17
SMG6-218ENST00000575454 C3orf30Q96M34 536 aa7.72□□□□□ -1.17
SMG6-218ENST00000575454 OXGR1Q96P68 337 aa7.72□□□□□ -1.17
SMG6-218ENST00000575454 ZIM3Q96PE6 472 aa7.72□□□□□ -1.17
SMG6-218ENST00000575454 GPA33Q99795 319 aa7.72□□□□□ -1.17
SMG6-218ENST00000575454 SYT3Q9BQG1 590 aa7.72□□□□□ -1.17
SMG6-218ENST00000575454 TMPRSS13Q9BYE2 586 aa7.72□□□□□ -1.17
SMG6-218ENST00000575454 SLC38A1Q9H2H9 487 aa7.72□□□□□ -1.17
SMG6-218ENST00000575454 ARMC7Q9H6L4 198 aa7.72□□□□□ -1.17
SMG6-218ENST00000575454 CACYBPQ9HB71 228 aaKnown RBP7.72□□□□□ -1.17
SMG6-218ENST00000575454 B3GAT2Q9NPZ5 323 aa7.72□□□□□ -1.17
SMG6-218ENST00000575454 B3GNT2Q9NY97 397 aa7.72□□□□□ -1.17
SMG6-218ENST00000575454 DUSP13Q9UII6 198 aa7.72□□□□□ -1.17
SMG6-218ENST00000575454 DSPPQ9NZW4 1301 aa7.72□□□□□ -1.17
SMG6-218ENST00000575454 LOC102725191A0A1B0GVB3 256 aa7.71□□□□□ -1.18
SMG6-218ENST00000575454 SLC22A23A1A5C7 686 aa7.71□□□□□ -1.18
SMG6-218ENST00000575454 CDHR4A6H8M9 788 aa7.71□□□□□ -1.18
SMG6-218ENST00000575454 WNT9BO14905 357 aa7.71□□□□□ -1.18
SMG6-218ENST00000575454 NPIPB7O75200 414 aa7.71□□□□□ -1.18
SMG6-218ENST00000575454 ENTPD5O75356 428 aa7.71□□□□□ -1.18
SMG6-218ENST00000575454 RP2O75695 350 aa7.71□□□□□ -1.18
SMG6-218ENST00000575454 PRSS23O95084 383 aa7.71□□□□□ -1.18
SMG6-218ENST00000575454 CPSF4O95639 269 aaKnown RBP7.71□□□□□ -1.18
SMG6-218ENST00000575454 RAB36O95755 333 aa7.71□□□□□ -1.18
SMG6-218ENST00000575454 AVPP01185 164 aa7.71□□□□□ -1.18
SMG6-218ENST00000575454 HLA-HP01893 362 aa7.71□□□□□ -1.18
SMG6-218ENST00000575454 NUDT17P0C025 328 aa7.71□□□□□ -1.18
SMG6-218ENST00000575454 NR2F1P10589 423 aa7.71□□□□□ -1.18
SMG6-218ENST00000575454 PNMTP11086 282 aa7.71□□□□□ -1.18
SMG6-218ENST00000575454 CD79AP11912 226 aa7.71□□□□□ -1.18
SMG6-218ENST00000575454 ZNF35P13682 527 aa7.71□□□□□ -1.18
SMG6-218ENST00000575454 ADRA2CP18825 462 aa7.71□□□□□ -1.18
SMG6-218ENST00000575454 NCF2P19878 526 aaPredicted RBP7.71□□□□□ -1.18
SMG6-218ENST00000575454 RPS4Y1P22090 263 aaKnown RBP7.71□□□□□ -1.18
SMG6-218ENST00000575454 PRTN3P24158 256 aa7.71□□□□□ -1.18
SMG6-218ENST00000575454 RAD52P43351 418 aa7.71□□□□□ -1.18
SMG6-218ENST00000575454 SEC24CP53992 1094 aa7.71□□□□□ -1.18
SMG6-218ENST00000575454 CLNS1AP54105 237 aaKnown RBP7.71□□□□□ -1.18
SMG6-218ENST00000575454 IL13RA1P78552 427 aa7.71□□□□□ -1.18
SMG6-218ENST00000575454 ZP4Q12836 540 aa7.71□□□□□ -1.18
SMG6-218ENST00000575454 OCLNQ16625 522 aa7.71□□□□□ -1.18
SMG6-218ENST00000575454 NKPD1Q17RQ9 610 aa7.71□□□□□ -1.18
SMG6-218ENST00000575454 FAM209AQ5JX71 171 aa7.71□□□□□ -1.18
SMG6-218ENST00000575454 TMEM154Q6P9G4 183 aa7.71□□□□□ -1.18
SMG6-218ENST00000575454 C5orf46Q6UWT4 87 aa7.71□□□□□ -1.18
SMG6-218ENST00000575454 NET1Q7Z628 596 aaPredicted RBP7.71□□□□□ -1.18
SMG6-218ENST00000575454 MYPOPQ86VE0 399 aaPredicted RBP7.71□□□□□ -1.18
SMG6-218ENST00000575454 RETREG3Q86VR2 466 aa7.71□□□□□ -1.18
SMG6-218ENST00000575454 ANKFN1Q8N957 763 aa7.71□□□□□ -1.18
SMG6-218ENST00000575454 AGR3Q8TD06 166 aa7.71□□□□□ -1.18
SMG6-218ENST00000575454 SNX33Q8WV41 574 aa7.71□□□□□ -1.18
SMG6-218ENST00000575454 YIPF5Q969M3 257 aa7.71□□□□□ -1.18
SMG6-218ENST00000575454 TESCQ96BS2 214 aa7.71□□□□□ -1.18
SMG6-218ENST00000575454 SLC25A36Q96CQ1 311 aa7.71□□□□□ -1.18
SMG6-218ENST00000575454 TIMD4Q96H15 378 aa7.71□□□□□ -1.18
SMG6-218ENST00000575454 LRR1Q96L50 414 aa7.71□□□□□ -1.18
SMG6-218ENST00000575454 SLC35A5Q9BS91 424 aa7.71□□□□□ -1.18
SMG6-218ENST00000575454 C7orf69Q9H7B7 122 aa7.71□□□□□ -1.18
SMG6-218ENST00000575454 ESM1Q9NQ30 184 aa7.71□□□□□ -1.18
SMG6-218ENST00000575454 MED29Q9NX70 200 aa7.71□□□□□ -1.18
SMG6-218ENST00000575454 SLCO1C1Q9NYB5 712 aa7.71□□□□□ -1.18
SMG6-218ENST00000575454 NKIRAS2Q9NYR9 191 aa7.71□□□□□ -1.18
SMG6-218ENST00000575454 CALML5Q9NZT1 146 aa7.71□□□□□ -1.18
SMG6-218ENST00000575454 SLC7A8Q9UHI5 535 aa7.71□□□□□ -1.18
SMG6-218ENST00000575454 POFUT2Q9Y2G5 429 aa7.71□□□□□ -1.18
SMG6-218ENST00000575454 CORINQ9Y5Q5 1042 aa7.71□□□□□ -1.18
SMG6-218ENST00000575454 PRAMEF27A3QJZ7 478 aa7.7□□□□□ -1.18
SMG6-218ENST00000575454 C17orf100A8MU93 164 aa7.7□□□□□ -1.18
SMG6-218ENST00000575454 FTCDNL1E5RQL4 147 aa7.7□□□□□ -1.18
SMG6-218ENST00000575454 AIM2O14862 343 aa7.7□□□□□ -1.18
SMG6-218ENST00000575454 MT-ND5P03915 603 aa7.7□□□□□ -1.18
SMG6-218ENST00000575454 ARAFP10398 606 aa7.7□□□□□ -1.18
SMG6-218ENST00000575454 NAT2P11245 290 aa7.7□□□□□ -1.18
SMG6-218ENST00000575454 ZNF14P17017 642 aaPredicted RBP7.7□□□□□ -1.18
SMG6-218ENST00000575454 ALDH3A1P30838 453 aa7.7□□□□□ -1.18
SMG6-218ENST00000575454 ACAA2P42765 397 aaKnown RBP7.7□□□□□ -1.18
SMG6-218ENST00000575454 CRYBB2P43320 205 aa7.7□□□□□ -1.18
SMG6-218ENST00000575454 LRRC74AQ0VAA2 488 aa7.7□□□□□ -1.18
SMG6-218ENST00000575454 BNIP2Q12982 314 aa7.7□□□□□ -1.18
SMG6-218ENST00000575454 CASP8Q14790 479 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms