RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 RPS6KB2Q9UBS0 482 aa9.05□□□□□ -0.96
TVP23B-208ENST00000575261 IGHV2OR16-5A0A0B4J2B6 119 aa9.04□□□□□ -0.96
TVP23B-208ENST00000575261 ZNF99A8MXY4 864 aaPredicted RBP9.04□□□□□ -0.96
TVP23B-208ENST00000575261 M0R082 166 aa9.04□□□□□ -0.96
TVP23B-208ENST00000575261 OR2T1O43869 369 aa9.04□□□□□ -0.96
TVP23B-208ENST00000575261 TACSTD2P09758 323 aa9.04□□□□□ -0.96
TVP23B-208ENST00000575261 KITP10721 976 aa9.04□□□□□ -0.96
TVP23B-208ENST00000575261 APEX1P27695 318 aaKnown RBP9.04□□□□□ -0.96
TVP23B-208ENST00000575261 CAPZA2P47755 286 aa9.04□□□□□ -0.96
TVP23B-208ENST00000575261 ARF1P84077 181 aaKnown RBP9.04□□□□□ -0.96
TVP23B-208ENST00000575261 IL1RL1Q01638 556 aa9.04□□□□□ -0.96
TVP23B-208ENST00000575261 HGFACQ04756 655 aa9.04□□□□□ -0.96
TVP23B-208ENST00000575261 FADDQ13158 208 aa9.04□□□□□ -0.96
TVP23B-208ENST00000575261 SNTB2Q13425 540 aaKnown RBP9.04□□□□□ -0.96
TVP23B-208ENST00000575261 C1DQ13901 141 aaKnown RBP9.04□□□□□ -0.96
TVP23B-208ENST00000575261 CEACAM16Q2WEN9 425 aa9.04□□□□□ -0.96
TVP23B-208ENST00000575261 GTDC1Q4AE62 458 aa9.04□□□□□ -0.96
TVP23B-208ENST00000575261 TNFAIP8L3Q5GJ75 292 aa9.04□□□□□ -0.96
TVP23B-208ENST00000575261 CEP85LQ5SZL2 805 aa9.04□□□□□ -0.96
TVP23B-208ENST00000575261 FAM69AQ5T7M9 428 aa9.04□□□□□ -0.96
TVP23B-208ENST00000575261 CROCCP2Q86T23 111 aa9.04□□□□□ -0.96
TVP23B-208ENST00000575261 MDP1Q86V88 176 aa9.04□□□□□ -0.96
TVP23B-208ENST00000575261 RFLNBQ8N5W9 214 aa9.04□□□□□ -0.96
TVP23B-208ENST00000575261 ANKRD42Q8N9B4 389 aa9.04□□□□□ -0.96
TVP23B-208ENST00000575261 IL17RDQ8NFM7 739 aa9.04□□□□□ -0.96
TVP23B-208ENST00000575261 BBS10Q8TAM1 723 aa9.04□□□□□ -0.96
TVP23B-208ENST00000575261 ZNF417Q8TAU3 575 aa9.04□□□□□ -0.96
TVP23B-208ENST00000575261 HPS1Q92902 700 aa9.04□□□□□ -0.96
TVP23B-208ENST00000575261 SLC38A4Q969I6 547 aa9.04□□□□□ -0.96
TVP23B-208ENST00000575261 MAELQ96JY0 434 aaKnown RBP9.04□□□□□ -0.96
TVP23B-208ENST00000575261 ZNF587Q96SQ5 575 aaPredicted RBP9.04□□□□□ -0.96
TVP23B-208ENST00000575261 DOK1Q99704 481 aa9.04□□□□□ -0.96
TVP23B-208ENST00000575261 RAD21L1Q9H4I0 556 aa9.04□□□□□ -0.96
TVP23B-208ENST00000575261 NOX3Q9HBY0 568 aa9.04□□□□□ -0.96
TVP23B-208ENST00000575261 CRLF2Q9HC73 371 aa9.04□□□□□ -0.96
TVP23B-208ENST00000575261 GPR35Q9HC97 309 aa9.04□□□□□ -0.96
TVP23B-208ENST00000575261 A4GALTQ9NPC4 353 aa9.04□□□□□ -0.96
TVP23B-208ENST00000575261 SDR39U1Q9NRG7 319 aaPredicted RBP9.04□□□□□ -0.96
TVP23B-208ENST00000575261 SEC14L4Q9UDX3 406 aa9.04□□□□□ -0.96
TVP23B-208ENST00000575261 USP22Q9UPT9 525 aa9.04□□□□□ -0.96
TVP23B-208ENST00000575261 TENM1Q9UKZ4 2725 aa9.03□□□□□ -0.96
TVP23B-208ENST00000575261 ZNF503-AS2A6NEH8 195 aa9.03□□□□□ -0.96
TVP23B-208ENST00000575261 C5orf58C9J3I9 102 aa9.03□□□□□ -0.96
TVP23B-208ENST00000575261 TCF21O43680 179 aa9.03□□□□□ -0.96
TVP23B-208ENST00000575261 TRAF3IP2O43734 574 aaPredicted RBP9.03□□□□□ -0.96
TVP23B-208ENST00000575261 LILRA1O75019 489 aa9.03□□□□□ -0.96
TVP23B-208ENST00000575261 SNNO75324 88 aaPredicted RBP9.03□□□□□ -0.96
TVP23B-208ENST00000575261 ETS2P15036 469 aa9.03□□□□□ -0.96
TVP23B-208ENST00000575261 PCMT1P22061 227 aa9.03□□□□□ -0.96
TVP23B-208ENST00000575261 IL2RGP31785 369 aa9.03□□□□□ -0.96
TVP23B-208ENST00000575261 SRP14P37108 136 aaKnown RBP9.03□□□□□ -0.96
TVP23B-208ENST00000575261 POLR2JP52435 117 aaKnown RBP9.03□□□□□ -0.96
TVP23B-208ENST00000575261 NCALDP61601 193 aa9.03□□□□□ -0.96
TVP23B-208ENST00000575261 HOXC5Q00444 222 aa9.03□□□□□ -0.96
TVP23B-208ENST00000575261 POU3F1Q03052 451 aaPredicted RBP9.03□□□□□ -0.96
TVP23B-208ENST00000575261 DAG1Q14118 895 aa9.03□□□□□ -0.96
TVP23B-208ENST00000575261 ADRM1Q16186 407 aa9.03□□□□□ -0.96
TVP23B-208ENST00000575261 ALG10BQ5I7T1 473 aa9.03□□□□□ -0.96
TVP23B-208ENST00000575261 KRT80Q6KB66 452 aa9.03□□□□□ -0.96
TVP23B-208ENST00000575261 UGT2A3Q6UWM9 527 aa9.03□□□□□ -0.96
TVP23B-208ENST00000575261 CDK20Q8IZL9 346 aa9.03□□□□□ -0.96
TVP23B-208ENST00000575261 TMEM123Q8N131 208 aa9.03□□□□□ -0.96
TVP23B-208ENST00000575261 ZCCHC24Q8N2G6 241 aaKnown RBP9.03□□□□□ -0.96
TVP23B-208ENST00000575261 ZNF786Q8N393 782 aa9.03□□□□□ -0.96
TVP23B-208ENST00000575261 LSMEM1Q8N8F7 131 aa9.03□□□□□ -0.96
TVP23B-208ENST00000575261 LINC01356Q8N9X3 169 aa9.03□□□□□ -0.96
TVP23B-208ENST00000575261 ADPRHL1Q8NDY3 354 aa9.03□□□□□ -0.96
TVP23B-208ENST00000575261 OR9I1Q8NGQ6 314 aa9.03□□□□□ -0.96
TVP23B-208ENST00000575261 UBASH3BQ8TF42 649 aa9.03□□□□□ -0.96
TVP23B-208ENST00000575261 CKAP2Q8WWK9 683 aa9.03□□□□□ -0.96
TVP23B-208ENST00000575261 MAL2Q969L2 176 aa9.03□□□□□ -0.96
TVP23B-208ENST00000575261 OR2M2Q96R28 347 aa9.03□□□□□ -0.96
TVP23B-208ENST00000575261 SNX18Q96RF0 628 aa9.03□□□□□ -0.96
TVP23B-208ENST00000575261 BCL2L10Q9HD36 194 aa9.03□□□□□ -0.96
TVP23B-208ENST00000575261 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.03□□□□□ -0.96
TVP23B-208ENST00000575261 CMAHPQ9Y471 501 aa9.03□□□□□ -0.96
TVP23B-208ENST00000575261 V9GYY5 206 aaPredicted RBP9.03□□□□□ -0.96
TVP23B-208ENST00000575261 TRAV36DV7A0A075B6V5 113 aa9.02□□□□□ -0.97
TVP23B-208ENST00000575261 LOC102725191A0A1B0GVB3 256 aa9.02□□□□□ -0.97
TVP23B-208ENST00000575261 A0A1B0GWA3 101 aa9.02□□□□□ -0.97
TVP23B-208ENST00000575261 TMEM129A0AVI4 362 aa9.02□□□□□ -0.97
TVP23B-208ENST00000575261 TMEM120BA0PK00 339 aa9.02□□□□□ -0.97
TVP23B-208ENST00000575261 SH3PXD2BA1X283 911 aa9.02□□□□□ -0.97
TVP23B-208ENST00000575261 M0R233 179 aa9.02□□□□□ -0.97
TVP23B-208ENST00000575261 M0R3G1 203 aa9.02□□□□□ -0.97
TVP23B-208ENST00000575261 CLIC1O00299 241 aa9.02□□□□□ -0.97
TVP23B-208ENST00000575261 SEC14L2O76054 403 aa9.02□□□□□ -0.97
TVP23B-208ENST00000575261 NUDT7P0C024 238 aa9.02□□□□□ -0.97
TVP23B-208ENST00000575261 BMP2P12643 396 aa9.02□□□□□ -0.97
TVP23B-208ENST00000575261 IFNGR1P15260 489 aa9.02□□□□□ -0.97
TVP23B-208ENST00000575261 NQO1P15559 274 aaKnown RBP9.02□□□□□ -0.97
TVP23B-208ENST00000575261 GRPRP30550 384 aa9.02□□□□□ -0.97
TVP23B-208ENST00000575261 PRKAR1BP31321 381 aa9.02□□□□□ -0.97
TVP23B-208ENST00000575261 CDH15P55291 814 aa9.02□□□□□ -0.97
TVP23B-208ENST00000575261 WDR4P57081 412 aaKnown RBP9.02□□□□□ -0.97
TVP23B-208ENST00000575261 RIN1Q13671 783 aa9.02□□□□□ -0.97
TVP23B-208ENST00000575261 MFSD13AQ14CX5 517 aa9.02□□□□□ -0.97
TVP23B-208ENST00000575261 RGNQ15493 299 aa9.02□□□□□ -0.97
TVP23B-208ENST00000575261 SLC9B1Q4ZJI4 515 aa9.02□□□□□ -0.97
TVP23B-208ENST00000575261 H1FNTQ75WM6 255 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms