RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 FEVQ99581 238 aa15.2■□□□□ 0.02
NUP88-210ENST00000574867 GPA33Q99795 319 aa15.2■□□□□ 0.02
NUP88-210ENST00000574867 ZNF556Q9HAH1 456 aa15.2■□□□□ 0.02
NUP88-210ENST00000574867 ERRFI1Q9UJM3 462 aaPredicted RBP15.2■□□□□ 0.02
NUP88-210ENST00000574867 CLEC4AQ9UMR7 237 aa15.2■□□□□ 0.02
NUP88-210ENST00000574867 SIGLEC7Q9Y286 467 aa15.2■□□□□ 0.02
NUP88-210ENST00000574867 FLVCR1Q9Y5Y0 555 aa15.2■□□□□ 0.02
NUP88-210ENST00000574867 NCOA6Q14686 2063 aaPredicted RBP15.2■□□□□ 0.02
NUP88-210ENST00000574867 PYCARD-AS1I3L0S3 204 aa15.2■□□□□ 0.02
NUP88-210ENST00000574867 HPRP00739 348 aa15.2■□□□□ 0.02
NUP88-210ENST00000574867 AQP2P41181 271 aa15.2■□□□□ 0.02
NUP88-210ENST00000574867 POU3F1Q03052 451 aaPredicted RBP15.2■□□□□ 0.02
NUP88-210ENST00000574867 C1DQ13901 141 aaKnown RBP15.2■□□□□ 0.02
NUP88-210ENST00000574867 RCN1Q15293 331 aa15.2■□□□□ 0.02
NUP88-210ENST00000574867 ALG10Q5BKT4 473 aa15.2■□□□□ 0.02
NUP88-210ENST00000574867 GALNT5Q7Z7M9 940 aa15.2■□□□□ 0.02
NUP88-210ENST00000574867 HS3ST5Q8IZT8 346 aa15.2■□□□□ 0.02
NUP88-210ENST00000574867 CNEP1R1Q8N9A8 125 aa15.2■□□□□ 0.02
NUP88-210ENST00000574867 OR51A7Q8NH64 312 aa15.2■□□□□ 0.02
NUP88-210ENST00000574867 FANK1Q8TC84 345 aa15.2■□□□□ 0.02
NUP88-210ENST00000574867 ASB5Q8WWX0 329 aa15.2■□□□□ 0.02
NUP88-210ENST00000574867 TMEM45BQ96B21 275 aa15.2■□□□□ 0.02
NUP88-210ENST00000574867 OSBPL10Q9BXB5 764 aa15.2■□□□□ 0.02
NUP88-210ENST00000574867 GABARAPL1Q9H0R8 117 aa15.2■□□□□ 0.02
NUP88-210ENST00000574867 KIF17Q9P2E2 1029 aa15.2■□□□□ 0.02
NUP88-210ENST00000574867 OAZ3Q9UMX2 235 aa15.2■□□□□ 0.02
NUP88-210ENST00000574867 RNF6Q9Y252 685 aa15.2■□□□□ 0.02
NUP88-210ENST00000574867 C11orf98E9PRG8 122 aa15.19■□□□□ 0.02
NUP88-210ENST00000574867 DVL2O14641 736 aa15.19■□□□□ 0.02
NUP88-210ENST00000574867 AKAP8O43823 692 aaKnown RBP15.19■□□□□ 0.02
NUP88-210ENST00000574867 TNFSF13O75888 250 aa15.19■□□□□ 0.02
NUP88-210ENST00000574867 CHRNB4P30926 498 aa15.19■□□□□ 0.02
NUP88-210ENST00000574867 COX10Q12887 443 aa15.19■□□□□ 0.02
NUP88-210ENST00000574867 FOXF2Q12947 444 aa15.19■□□□□ 0.02
NUP88-210ENST00000574867 FHL1Q13642 323 aa15.19■□□□□ 0.02
NUP88-210ENST00000574867 RPL13AP3Q6NVV1 102 aa15.19■□□□□ 0.02
NUP88-210ENST00000574867 CD300LDQ6UXZ3 194 aa15.19■□□□□ 0.02
NUP88-210ENST00000574867 CREB3L2Q70SY1 520 aa15.19■□□□□ 0.02
NUP88-210ENST00000574867 KDM8Q8N371 416 aa15.19■□□□□ 0.02
NUP88-210ENST00000574867 ATG16L2Q8NAA4 619 aa15.19■□□□□ 0.02
NUP88-210ENST00000574867 ICA1LQ8NDH6 482 aa15.19■□□□□ 0.02
NUP88-210ENST00000574867 DCLRE1BQ9H816 532 aa15.19■□□□□ 0.02
NUP88-210ENST00000574867 MCCC2Q9HCC0 563 aa15.19■□□□□ 0.02
NUP88-210ENST00000574867 INIPQ9NRY2 104 aa15.19■□□□□ 0.02
NUP88-210ENST00000574867 NPIPB13A6NJU9 1138 aa15.18■□□□□ 0.02
NUP88-210ENST00000574867 NPIPB4C9JG80 1138 aa15.18■□□□□ 0.02
NUP88-210ENST00000574867 TRAF3IP2O43734 574 aaPredicted RBP15.18■□□□□ 0.02
NUP88-210ENST00000574867 PTP4A3O75365 173 aa15.18■□□□□ 0.02
NUP88-210ENST00000574867 NDUFB2O95178 105 aa15.18■□□□□ 0.02
NUP88-210ENST00000574867 BAG2O95816 211 aa15.18■□□□□ 0.02
NUP88-210ENST00000574867 POU2F1P14859 743 aa15.18■□□□□ 0.02
NUP88-210ENST00000574867 KIR2DL2P43627 348 aaPredicted RBP15.18■□□□□ 0.02
NUP88-210ENST00000574867 SIRPAP78324 504 aa15.18■□□□□ 0.02
NUP88-210ENST00000574867 SMARCD3Q6STE5 483 aa15.18■□□□□ 0.02
NUP88-210ENST00000574867 ZNF620Q6ZNG0 422 aa15.18■□□□□ 0.02
NUP88-210ENST00000574867 STK32CQ86UX6 486 aa15.18■□□□□ 0.02
NUP88-210ENST00000574867 MOSPD2Q8NHP6 518 aa15.18■□□□□ 0.02
NUP88-210ENST00000574867 GTPBP3Q969Y2 492 aaKnown RBP15.18■□□□□ 0.02
NUP88-210ENST00000574867 TNFRSF13CQ96RJ3 184 aa15.18■□□□□ 0.02
NUP88-210ENST00000574867 PIGMQ9H3S5 423 aa15.18■□□□□ 0.02
NUP88-210ENST00000574867 PARPBPQ9NWS1 579 aa15.18■□□□□ 0.02
NUP88-210ENST00000574867 RCE1Q9Y256 329 aa15.18■□□□□ 0.02
NUP88-210ENST00000574867 NOSIPQ9Y314 301 aaKnown RBP15.18■□□□□ 0.02
NUP88-210ENST00000574867 MYO7BQ6PIF6 2116 aa15.18■□□□□ 0.02
NUP88-210ENST00000574867 A0A1W2PRG6 482 aa15.18■□□□□ 0.02
NUP88-210ENST00000574867 AGAP20933 346 aa15.18■□□□□ 0.02
NUP88-210ENST00000574867 FAHD1Q6P587 224 aa15.18■□□□□ 0.02
NUP88-210ENST00000574867 RASSF6Q6ZTQ3 369 aa15.18■□□□□ 0.02
NUP88-210ENST00000574867 EPHX4Q8IUS5 362 aa15.18■□□□□ 0.02
NUP88-210ENST00000574867 CLDN22Q8N7P3 220 aa15.18■□□□□ 0.02
NUP88-210ENST00000574867 NIPSNAP1Q9BPW8 284 aa15.18■□□□□ 0.02
NUP88-210ENST00000574867 UCK2Q9BZX2 261 aa15.18■□□□□ 0.02
NUP88-210ENST00000574867 MAGED1Q9Y5V3 778 aaPredicted RBP15.18■□□□□ 0.02
NUP88-210ENST00000574867 CDH10Q9Y6N8 788 aa15.18■□□□□ 0.02
NUP88-210ENST00000574867 UBR5O95071 2799 aaPredicted RBP15.17■□□□□ 0.02
NUP88-210ENST00000574867 SAC3D1A6NKF1 404 aa15.17■□□□□ 0.02
NUP88-210ENST00000574867 ANPEPP15144 967 aa15.17■□□□□ 0.02
NUP88-210ENST00000574867 PRKACGP22612 351 aa15.17■□□□□ 0.02
NUP88-210ENST00000574867 DAP3P51398 398 aaKnown RBP15.17■□□□□ 0.02
NUP88-210ENST00000574867 HDDC2Q7Z4H3 204 aa15.17■□□□□ 0.02
NUP88-210ENST00000574867 CCDC71Q8IV32 467 aaPredicted RBP15.17■□□□□ 0.02
NUP88-210ENST00000574867 ZIC4Q8N9L1 334 aa15.17■□□□□ 0.02
NUP88-210ENST00000574867 ZNF385AQ96PM9 386 aaKnown RBP15.17■□□□□ 0.02
NUP88-210ENST00000574867 GPX7Q96SL4 187 aaPredicted RBP15.17■□□□□ 0.02
NUP88-210ENST00000574867 OR52D1Q9H346 318 aa15.17■□□□□ 0.02
NUP88-210ENST00000574867 STX18Q9P2W9 335 aaKnown RBP15.17■□□□□ 0.02
NUP88-210ENST00000574867 MYO18BQ8IUG5 2567 aa15.17■□□□□ 0.02
NUP88-210ENST00000574867 MRPL33O75394 65 aaKnown RBP15.16■□□□□ 0.02
NUP88-210ENST00000574867 SERPINI2O75830 405 aa15.16■□□□□ 0.02
NUP88-210ENST00000574867 F13BP05160 661 aa15.16■□□□□ 0.02
NUP88-210ENST00000574867 CD8BP10966 210 aa15.16■□□□□ 0.02
NUP88-210ENST00000574867 HLA-DOBP13765 273 aa15.16■□□□□ 0.02
NUP88-210ENST00000574867 BMP5P22003 454 aa15.16■□□□□ 0.02
NUP88-210ENST00000574867 VWA1Q6PCB0 445 aa15.16■□□□□ 0.02
NUP88-210ENST00000574867 CASP12Q6UXS9 341 aa15.16■□□□□ 0.02
NUP88-210ENST00000574867 LRRC75AQ8NAA5 344 aa15.16■□□□□ 0.02
NUP88-210ENST00000574867 STARD4Q96DR4 205 aa15.16■□□□□ 0.02
NUP88-210ENST00000574867 ADAD1Q96M93 576 aaKnown RBP15.16■□□□□ 0.02
NUP88-210ENST00000574867 PROCRQ9UNN8 238 aa15.16■□□□□ 0.02
NUP88-210ENST00000574867 INTS1Q8N201 2190 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms