RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 PXKQ7Z7A4 578 aa12.73□□□□□ -0.37
VPS33B-208ENST00000574755 MISPQ8IVT2 679 aa12.73□□□□□ -0.37
VPS33B-208ENST00000574755 C1orf210Q8IVY1 113 aa12.73□□□□□ -0.37
VPS33B-208ENST00000574755 ACOT12Q8WYK0 555 aa12.73□□□□□ -0.37
VPS33B-208ENST00000574755 RELTQ969Z4 430 aa12.73□□□□□ -0.37
VPS33B-208ENST00000574755 KIAA1143Q96AT1 154 aaPredicted RBP12.73□□□□□ -0.37
VPS33B-208ENST00000574755 C8orf44Q96CB5 159 aa12.73□□□□□ -0.37
VPS33B-208ENST00000574755 SPSB2Q99619 263 aa12.73□□□□□ -0.37
VPS33B-208ENST00000574755 MALT1Q9UDY8 824 aa12.73□□□□□ -0.37
VPS33B-208ENST00000574755 TMEM72A0PK05 275 aa12.73□□□□□ -0.37
VPS33B-208ENST00000574755 C2orf72A6NCS6 295 aa12.73□□□□□ -0.37
VPS33B-208ENST00000574755 DCTN6O00399 190 aa12.73□□□□□ -0.37
VPS33B-208ENST00000574755 RENP00797 406 aa12.73□□□□□ -0.37
VPS33B-208ENST00000574755 MT-ATP6P00846 226 aa12.73□□□□□ -0.37
VPS33B-208ENST00000574755 CSF3P09919 207 aa12.73□□□□□ -0.37
VPS33B-208ENST00000574755 AHCYP23526 432 aa12.73□□□□□ -0.37
VPS33B-208ENST00000574755 EDNRAP25101 427 aa12.73□□□□□ -0.37
VPS33B-208ENST00000574755 CD300CQ08708 224 aa12.73□□□□□ -0.37
VPS33B-208ENST00000574755 PEAR1Q5VY43 1037 aaPredicted RBP12.73□□□□□ -0.37
VPS33B-208ENST00000574755 GPR139Q6DWJ6 353 aa12.73□□□□□ -0.37
VPS33B-208ENST00000574755 LCN10Q6JVE6 187 aa12.73□□□□□ -0.37
VPS33B-208ENST00000574755 RPL22L1Q6P5R6 122 aaKnown RBP12.73□□□□□ -0.37
VPS33B-208ENST00000574755 CPEB2Q7Z5Q1 589 aaKnown RBP12.73□□□□□ -0.37
VPS33B-208ENST00000574755 TPRA1Q86W33 373 aa12.73□□□□□ -0.37
VPS33B-208ENST00000574755 ADGRG3Q86Y34 549 aa12.73□□□□□ -0.37
VPS33B-208ENST00000574755 OR2T4Q8NH00 348 aa12.73□□□□□ -0.37
VPS33B-208ENST00000574755 WDR77Q9BQA1 342 aaPredicted RBP12.73□□□□□ -0.37
VPS33B-208ENST00000574755 PTDSS2Q9BVG9 487 aa12.73□□□□□ -0.37
VPS33B-208ENST00000574755 TAS2R5Q9NYW4 299 aa12.73□□□□□ -0.37
VPS33B-208ENST00000574755 ADAM30Q9UKF2 790 aa12.73□□□□□ -0.37
VPS33B-208ENST00000574755 A8MVM7 634 aa12.72□□□□□ -0.37
VPS33B-208ENST00000574755 MEN1O00255 615 aa12.72□□□□□ -0.37
VPS33B-208ENST00000574755 SNPHO15079 494 aa12.72□□□□□ -0.37
VPS33B-208ENST00000574755 ARHGEF9O43307 516 aa12.72□□□□□ -0.37
VPS33B-208ENST00000574755 GDF9O60383 454 aa12.72□□□□□ -0.37
VPS33B-208ENST00000574755 CER1O95813 267 aa12.72□□□□□ -0.37
VPS33B-208ENST00000574755 PSMB10P40306 273 aa12.72□□□□□ -0.37
VPS33B-208ENST00000574755 OR10A3P58181 314 aa12.72□□□□□ -0.37
VPS33B-208ENST00000574755 IL18Q14116 193 aa12.72□□□□□ -0.37
VPS33B-208ENST00000574755 CCDC58Q4VC31 144 aa12.72□□□□□ -0.37
VPS33B-208ENST00000574755 TRIM61Q5EBN2 209 aa12.72□□□□□ -0.37
VPS33B-208ENST00000574755 C1orf140Q5VVS0 124 aa12.72□□□□□ -0.37
VPS33B-208ENST00000574755 NRARPQ7Z6K4 114 aa12.72□□□□□ -0.37
VPS33B-208ENST00000574755 EXD3Q8N9H8 876 aa12.72□□□□□ -0.37
VPS33B-208ENST00000574755 SMAD5Q99717 465 aaKnown RBP12.72□□□□□ -0.37
VPS33B-208ENST00000574755 SYT4Q9H2B2 425 aa12.72□□□□□ -0.37
VPS33B-208ENST00000574755 GALNT9Q9HCQ5 603 aa12.72□□□□□ -0.37
VPS33B-208ENST00000574755 PPIEQ9UNP9 301 aaKnown RBP12.72□□□□□ -0.37
VPS33B-208ENST00000574755 A0A1W2PPK0 400 aa12.72□□□□□ -0.37
VPS33B-208ENST00000574755 FAM25AB3EWG3 89 aa12.72□□□□□ -0.37
VPS33B-208ENST00000574755 FAM25CB3EWG5 89 aa12.72□□□□□ -0.37
VPS33B-208ENST00000574755 FAM25GB3EWG6 89 aa12.72□□□□□ -0.37
VPS33B-208ENST00000574755 SLC19A2O60779 497 aa12.72□□□□□ -0.37
VPS33B-208ENST00000574755 PLGP00747 810 aaPredicted RBP12.72□□□□□ -0.37
VPS33B-208ENST00000574755 APEX1P27695 318 aaKnown RBP12.72□□□□□ -0.37
VPS33B-208ENST00000574755 EVX1P49640 407 aa12.72□□□□□ -0.37
VPS33B-208ENST00000574755 RGS19P49795 217 aa12.72□□□□□ -0.37
VPS33B-208ENST00000574755 SIGLEC14Q08ET2 396 aa12.72□□□□□ -0.37
VPS33B-208ENST00000574755 C17orf67Q0P5P2 114 aa12.72□□□□□ -0.37
VPS33B-208ENST00000574755 SGCBQ16585 318 aa12.72□□□□□ -0.37
VPS33B-208ENST00000574755 SFXN4Q6P4A7 337 aa12.72□□□□□ -0.37
VPS33B-208ENST00000574755 SLC16A9Q7RTY1 509 aa12.72□□□□□ -0.37
VPS33B-208ENST00000574755 OR6V1Q8N148 313 aa12.72□□□□□ -0.37
VPS33B-208ENST00000574755 TMEM234Q8WY98 164 aa12.72□□□□□ -0.37
VPS33B-208ENST00000574755 HPS1Q92902 700 aa12.72□□□□□ -0.37
VPS33B-208ENST00000574755 PMEPA1Q969W9 287 aa12.72□□□□□ -0.37
VPS33B-208ENST00000574755 PDCD1LG2Q9BQ51 273 aa12.72□□□□□ -0.37
VPS33B-208ENST00000574755 GTPBP2Q9BX10 602 aaKnown RBP12.72□□□□□ -0.37
VPS33B-208ENST00000574755 OR11A1Q9GZK7 315 aa12.72□□□□□ -0.37
VPS33B-208ENST00000574755 PCDHGB2Q9Y5G2 931 aa12.72□□□□□ -0.37
VPS33B-208ENST00000574755 TMEM200CA6NKL6 621 aa12.71□□□□□ -0.37
VPS33B-208ENST00000574755 D6RAR5 112 aa12.71□□□□□ -0.37
VPS33B-208ENST00000574755 XKRYO14609 159 aa12.71□□□□□ -0.37
VPS33B-208ENST00000574755 ADAM10O14672 748 aa12.71□□□□□ -0.37
VPS33B-208ENST00000574755 NPIPB7O75200 414 aa12.71□□□□□ -0.37
VPS33B-208ENST00000574755 ONECUT2O95948 504 aa12.71□□□□□ -0.37
VPS33B-208ENST00000574755 PRKCAP17252 672 aa12.71□□□□□ -0.37
VPS33B-208ENST00000574755 P2RY14Q15391 338 aa12.71□□□□□ -0.37
VPS33B-208ENST00000574755 CARTPTQ16568 116 aa12.71□□□□□ -0.37
VPS33B-208ENST00000574755 METAP1DQ6UB28 335 aaPredicted RBP12.71□□□□□ -0.37
VPS33B-208ENST00000574755 PAMR1Q6UXH9 720 aa12.71□□□□□ -0.37
VPS33B-208ENST00000574755 SPATC1Q76KD6 591 aa12.71□□□□□ -0.37
VPS33B-208ENST00000574755 CELF2-AS1Q8N7Q2 184 aa12.71□□□□□ -0.37
VPS33B-208ENST00000574755 OR5L2Q8NGL0 311 aa12.71□□□□□ -0.37
VPS33B-208ENST00000574755 AKIRIN1Q9H9L7 192 aaPredicted RBP12.71□□□□□ -0.37
VPS33B-208ENST00000574755 INIPQ9NRY2 104 aa12.71□□□□□ -0.37
VPS33B-208ENST00000574755 C19orf25Q9UFG5 118 aaPredicted RBP12.71□□□□□ -0.37
VPS33B-208ENST00000574755 TVP23AA6NH52 213 aa12.71□□□□□ -0.38
VPS33B-208ENST00000574755 ARL6IP5O75915 188 aa12.71□□□□□ -0.38
VPS33B-208ENST00000574755 OR6A2O95222 327 aa12.71□□□□□ -0.38
VPS33B-208ENST00000574755 AHSA1O95433 338 aa12.71□□□□□ -0.38
VPS33B-208ENST00000574755 SLC2A2P11168 524 aaPredicted RBP12.71□□□□□ -0.38
VPS33B-208ENST00000574755 HTR3AP46098 478 aa12.71□□□□□ -0.38
VPS33B-208ENST00000574755 IL11RAQ14626 422 aa12.71□□□□□ -0.38
VPS33B-208ENST00000574755 TIGD4Q8IY51 512 aa12.71□□□□□ -0.38
VPS33B-208ENST00000574755 PM20D2Q8IYS1 436 aa12.71□□□□□ -0.38
VPS33B-208ENST00000574755 Q8N402 240 aa12.71□□□□□ -0.38
VPS33B-208ENST00000574755 CEP76Q8TAP6 659 aa12.71□□□□□ -0.38
VPS33B-208ENST00000574755 ZC3H10Q96K80 434 aaKnown RBP12.71□□□□□ -0.38
VPS33B-208ENST00000574755 ADAD1Q96M93 576 aaKnown RBP12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms