RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 SLCO1B3Q9NPD5 702 aa2.53□□□□□ -2
CDC27-216ENST00000574304 ZDHHC4Q9NPG8 344 aa2.53□□□□□ -2
CDC27-216ENST00000574304 LAMP5Q9UJQ1 280 aa2.53□□□□□ -2
CDC27-216ENST00000574304 TMCO1Q9UM00 188 aa2.53□□□□□ -2
CDC27-216ENST00000574304 MEMO1Q9Y316 297 aa2.53□□□□□ -2
CDC27-216ENST00000574304 KIF26AQ9ULI4 1882 aaPredicted RBP2.53□□□□□ -2
CDC27-216ENST00000574304 A0A0U1RQS6 177 aa2.52□□□□□ -2.01
CDC27-216ENST00000574304 TCRBV9S1A1TA0A576 114 aa2.52□□□□□ -2.01
CDC27-216ENST00000574304 PLAC8L1A1L4L8 177 aa2.52□□□□□ -2.01
CDC27-216ENST00000574304 PRSS37A4D1T9 235 aa2.52□□□□□ -2.01
CDC27-216ENST00000574304 A8MXQ7 604 aa2.52□□□□□ -2.01
CDC27-216ENST00000574304 ENTPD5O75356 428 aa2.52□□□□□ -2.01
CDC27-216ENST00000574304 ATP5LO75964 103 aa2.52□□□□□ -2.01
CDC27-216ENST00000574304 CISD3P0C7P0 127 aa2.52□□□□□ -2.01
CDC27-216ENST00000574304 CCDC130P13994 396 aa2.52□□□□□ -2.01
CDC27-216ENST00000574304 ATP6V1C1P21283 382 aa2.52□□□□□ -2.01
CDC27-216ENST00000574304 HMGB2P26583 209 aaKnown RBP2.52□□□□□ -2.01
CDC27-216ENST00000574304 LAP3P28838 519 aa2.52□□□□□ -2.01
CDC27-216ENST00000574304 CASP4P49662 377 aa2.52□□□□□ -2.01
CDC27-216ENST00000574304 RGS4P49798 205 aa2.52□□□□□ -2.01
CDC27-216ENST00000574304 PPT1P50897 306 aa2.52□□□□□ -2.01
CDC27-216ENST00000574304 PDIA2Q13087 525 aaKnown RBP2.52□□□□□ -2.01
CDC27-216ENST00000574304 GANABQ14697 944 aaKnown RBP2.52□□□□□ -2.01
CDC27-216ENST00000574304 DUSP7Q16829 419 aa2.52□□□□□ -2.01
CDC27-216ENST00000574304 SLC36A3Q495N2 470 aa2.52□□□□□ -2.01
CDC27-216ENST00000574304 COA6Q5JTJ3 125 aaKnown RBP2.52□□□□□ -2.01
CDC27-216ENST00000574304 RIPPLY2Q5TAB7 128 aa2.52□□□□□ -2.01
CDC27-216ENST00000574304 NANOGP8Q6NSW7 305 aa2.52□□□□□ -2.01
CDC27-216ENST00000574304 THOC6Q86W42 341 aaKnown RBP2.52□□□□□ -2.01
CDC27-216ENST00000574304 ACOT4Q8N9L9 421 aa2.52□□□□□ -2.01
CDC27-216ENST00000574304 CD300LFQ8TDQ1 290 aa2.52□□□□□ -2.01
CDC27-216ENST00000574304 UFD1Q92890 307 aa2.52□□□□□ -2.01
CDC27-216ENST00000574304 FGF14Q92915 247 aa2.52□□□□□ -2.01
CDC27-216ENST00000574304 DNAJC19Q96DA6 116 aa2.52□□□□□ -2.01
CDC27-216ENST00000574304 OXGR1Q96P68 337 aa2.52□□□□□ -2.01
CDC27-216ENST00000574304 CTPS2Q9NRF8 586 aa2.52□□□□□ -2.01
CDC27-216ENST00000574304 TIMM10BQ9Y5J6 103 aa2.52□□□□□ -2.01
CDC27-216ENST00000574304 FANCIQ9NVI1 1328 aa2.51□□□□□ -2.01
CDC27-216ENST00000574304 COLCA2A8K830 154 aa2.51□□□□□ -2.01
CDC27-216ENST00000574304 IDH1O75874 414 aaKnown RBP2.51□□□□□ -2.01
CDC27-216ENST00000574304 IFNB1P01574 187 aa2.51□□□□□ -2.01
CDC27-216ENST00000574304 GKN3PP0CG01 181 aa2.51□□□□□ -2.01
CDC27-216ENST00000574304 ZNF30P17039 623 aa2.51□□□□□ -2.01
CDC27-216ENST00000574304 QARSP47897 775 aaKnown RBP2.51□□□□□ -2.01
CDC27-216ENST00000574304 FGF8P55075 233 aaPredicted RBP2.51□□□□□ -2.01
CDC27-216ENST00000574304 FZD2Q14332 565 aa2.51□□□□□ -2.01
CDC27-216ENST00000574304 CES3Q6UWW8 571 aa2.51□□□□□ -2.01
CDC27-216ENST00000574304 ZDHHC21Q8IVQ6 265 aa2.51□□□□□ -2.01
CDC27-216ENST00000574304 FNDC5Q8NAU1 212 aa2.51□□□□□ -2.01
CDC27-216ENST00000574304 IPMKQ8NFU5 416 aa2.51□□□□□ -2.01
CDC27-216ENST00000574304 LINC00477Q96M19 166 aa2.51□□□□□ -2.01
CDC27-216ENST00000574304 SECISBP2Q96T21 854 aaKnown RBP2.51□□□□□ -2.01
CDC27-216ENST00000574304 ZNF2Q9BSG1 426 aaPredicted RBP2.51□□□□□ -2.01
CDC27-216ENST00000574304 TPPP3Q9BW30 176 aa2.51□□□□□ -2.01
CDC27-216ENST00000574304 GBA3Q9H227 469 aa2.51□□□□□ -2.01
CDC27-216ENST00000574304 NHEJ1Q9H9Q4 299 aaPredicted RBP2.51□□□□□ -2.01
CDC27-216ENST00000574304 NOX3Q9HBY0 568 aa2.51□□□□□ -2.01
CDC27-216ENST00000574304 SLC40A1Q9NP59 571 aa2.51□□□□□ -2.01
CDC27-216ENST00000574304 GIN1Q9NXP7 522 aa2.51□□□□□ -2.01
CDC27-216ENST00000574304 CALYQ9NYX4 217 aa2.51□□□□□ -2.01
CDC27-216ENST00000574304 XCL2Q9UBD3 114 aa2.51□□□□□ -2.01
CDC27-216ENST00000574304 POLDIP2Q9Y2S7 368 aa2.51□□□□□ -2.01
CDC27-216ENST00000574304 IGSF9BQ9UPX0 1349 aa2.5□□□□□ -2.01
CDC27-216ENST00000574304 IGLV2-18A0A075B6J9 118 aa2.5□□□□□ -2.01
CDC27-216ENST00000574304 A0A1B0GWJ7 208 aa2.5□□□□□ -2.01
CDC27-216ENST00000574304 CCDC182A6NF36 153 aa2.5□□□□□ -2.01
CDC27-216ENST00000574304 H3BNH8 94 aa2.5□□□□□ -2.01
CDC27-216ENST00000574304 XKRYO14609 159 aa2.5□□□□□ -2.01
CDC27-216ENST00000574304 RBBP9O75884 186 aa2.5□□□□□ -2.01
CDC27-216ENST00000574304 BGLAPP02818 100 aa2.5□□□□□ -2.01
CDC27-216ENST00000574304 CSF3P09919 207 aa2.5□□□□□ -2.01
CDC27-216ENST00000574304 ZDHHC11BP0C7U3 371 aa2.5□□□□□ -2.01
CDC27-216ENST00000574304 TLX1NBP0CAT3 122 aa2.5□□□□□ -2.01
CDC27-216ENST00000574304 IGHV3-43DP0DP04 118 aa2.5□□□□□ -2.01
CDC27-216ENST00000574304 PGAM1P18669 254 aa2.5□□□□□ -2.01
CDC27-216ENST00000574304 OMGP23515 440 aa2.5□□□□□ -2.01
CDC27-216ENST00000574304 RPL13AP40429 203 aaKnown RBP2.5□□□□□ -2.01
CDC27-216ENST00000574304 GYG1P46976 350 aa2.5□□□□□ -2.01
CDC27-216ENST00000574304 DPYSL2Q16555 572 aa2.5□□□□□ -2.01
CDC27-216ENST00000574304 HSP90AA5PQ58FG0 334 aa2.5□□□□□ -2.01
CDC27-216ENST00000574304 TTC23Q5W5X9 447 aa2.5□□□□□ -2.01
CDC27-216ENST00000574304 SLC25A34Q6PIV7 304 aa2.5□□□□□ -2.01
CDC27-216ENST00000574304 ZNF836Q6ZNA1 936 aa2.5□□□□□ -2.01
CDC27-216ENST00000574304 GET4Q7L5D6 327 aaPredicted RBP2.5□□□□□ -2.01
CDC27-216ENST00000574304 HMGN2P46Q86SG4 172 aa2.5□□□□□ -2.01
CDC27-216ENST00000574304 ZNF683Q8IZ20 524 aa2.5□□□□□ -2.01
CDC27-216ENST00000574304 PGAM4Q8N0Y7 254 aa2.5□□□□□ -2.01
CDC27-216ENST00000574304 TMEM123Q8N131 208 aa2.5□□□□□ -2.01
CDC27-216ENST00000574304 ANKFN1Q8N957 763 aa2.5□□□□□ -2.01
CDC27-216ENST00000574304 VN1R2Q8NFZ6 395 aa2.5□□□□□ -2.01
CDC27-216ENST00000574304 OR52H1Q8NGJ2 320 aa2.5□□□□□ -2.01
CDC27-216ENST00000574304 UBE2E3Q969T4 207 aa2.5□□□□□ -2.01
CDC27-216ENST00000574304 AURKBQ96GD4 344 aaPredicted RBP2.5□□□□□ -2.01
CDC27-216ENST00000574304 ZNF641Q96N77 438 aaPredicted RBP2.5□□□□□ -2.01
CDC27-216ENST00000574304 CLCC1Q96S66 551 aa2.5□□□□□ -2.01
CDC27-216ENST00000574304 LRRN3Q9H3W5 708 aa2.5□□□□□ -2.01
CDC27-216ENST00000574304 RAB18Q9NP72 206 aa2.5□□□□□ -2.01
CDC27-216ENST00000574304 SIRT7Q9NRC8 400 aa2.5□□□□□ -2.01
CDC27-216ENST00000574304 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.5□□□□□ -2.01
CDC27-216ENST00000574304 SPATA7Q9P0W8 599 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms