RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 ACOT8O14734 319 aa11.3□□□□□ -0.6
TRAPPC1-206ENST00000573989 CASKO14936 926 aa11.3□□□□□ -0.6
TRAPPC1-206ENST00000573989 KRT36O76013 467 aa11.3□□□□□ -0.6
TRAPPC1-206ENST00000573989 PRSS23O95084 383 aa11.3□□□□□ -0.6
TRAPPC1-206ENST00000573989 ADAP00813 363 aa11.3□□□□□ -0.6
TRAPPC1-206ENST00000573989 ASAH2BP0C7U1 165 aa11.3□□□□□ -0.6
TRAPPC1-206ENST00000573989 SAGP10523 405 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC1-206ENST00000573989 PSMB1P20618 241 aaKnown RBP11.3□□□□□ -0.6
TRAPPC1-206ENST00000573989 IL32P24001 234 aa11.3□□□□□ -0.6
TRAPPC1-206ENST00000573989 IFNGR2P38484 337 aa11.3□□□□□ -0.6
TRAPPC1-206ENST00000573989 SLC9A3P48764 834 aa11.3□□□□□ -0.6
TRAPPC1-206ENST00000573989 CLDN17P56750 224 aa11.3□□□□□ -0.6
TRAPPC1-206ENST00000573989 POU3F1Q03052 451 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC1-206ENST00000573989 PRKCDQ05655 676 aa11.3□□□□□ -0.6
TRAPPC1-206ENST00000573989 ZP4Q12836 540 aa11.3□□□□□ -0.6
TRAPPC1-206ENST00000573989 MS4A18Q3C1V0 323 aa11.3□□□□□ -0.6
TRAPPC1-206ENST00000573989 NIPAL3Q6P499 406 aa11.3□□□□□ -0.6
TRAPPC1-206ENST00000573989 SSX8Q7RTT4 187 aa11.3□□□□□ -0.6
TRAPPC1-206ENST00000573989 HDDC2Q7Z4H3 204 aa11.3□□□□□ -0.6
TRAPPC1-206ENST00000573989 EPHX4Q8IUS5 362 aa11.3□□□□□ -0.6
TRAPPC1-206ENST00000573989 NRMQ8IXM6 262 aa11.3□□□□□ -0.6
TRAPPC1-206ENST00000573989 GABRG1Q8N1C3 465 aa11.3□□□□□ -0.6
TRAPPC1-206ENST00000573989 KISS1RQ969F8 398 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC1-206ENST00000573989 DACH2Q96NX9 599 aa11.3□□□□□ -0.6
TRAPPC1-206ENST00000573989 ZNF385AQ96PM9 386 aaKnown RBP11.3□□□□□ -0.6
TRAPPC1-206ENST00000573989 MED18Q9BUE0 208 aa11.3□□□□□ -0.6
TRAPPC1-206ENST00000573989 LRMDAQ9H2I8 198 aa11.3□□□□□ -0.6
TRAPPC1-206ENST00000573989 SLCO5A1Q9H2Y9 848 aa11.3□□□□□ -0.6
TRAPPC1-206ENST00000573989 YY1AP1Q9H869 796 aa11.3□□□□□ -0.6
TRAPPC1-206ENST00000573989 MCCC2Q9HCC0 563 aa11.3□□□□□ -0.6
TRAPPC1-206ENST00000573989 C20orf141Q9NUB4 165 aa11.3□□□□□ -0.6
TRAPPC1-206ENST00000573989 ZNF226Q9NYT6 803 aa11.3□□□□□ -0.6
TRAPPC1-206ENST00000573989 B3GAT1Q9P2W7 334 aa11.3□□□□□ -0.6
TRAPPC1-206ENST00000573989 SEC14L4Q9UDX3 406 aa11.3□□□□□ -0.6
TRAPPC1-206ENST00000573989 PRSS50Q9UI38 385 aa11.3□□□□□ -0.6
TRAPPC1-206ENST00000573989 TESMINQ9Y4I5 508 aa11.3□□□□□ -0.6
TRAPPC1-206ENST00000573989 A0A087WUU8 490 aa11.29□□□□□ -0.6
TRAPPC1-206ENST00000573989 A0A1W2PRG6 482 aa11.29□□□□□ -0.6
TRAPPC1-206ENST00000573989 SH3D21A4FU49 640 aa11.29□□□□□ -0.6
TRAPPC1-206ENST00000573989 ZNF726A6NNF4 738 aa11.29□□□□□ -0.6
TRAPPC1-206ENST00000573989 EFCAB9A8MZ26 197 aa11.29□□□□□ -0.6
TRAPPC1-206ENST00000573989 SLC43A1O75387 559 aa11.29□□□□□ -0.6
TRAPPC1-206ENST00000573989 DIRAS1O95057 198 aa11.29□□□□□ -0.6
TRAPPC1-206ENST00000573989 GOSR1O95249 250 aa11.29□□□□□ -0.6
TRAPPC1-206ENST00000573989 RAP2AP10114 183 aa11.29□□□□□ -0.6
TRAPPC1-206ENST00000573989 EPXP11678 715 aa11.29□□□□□ -0.6
TRAPPC1-206ENST00000573989 SSTR2P30874 369 aa11.29□□□□□ -0.6
TRAPPC1-206ENST00000573989 RRM2P31350 389 aa11.29□□□□□ -0.6
TRAPPC1-206ENST00000573989 MAGEA2P43356 314 aa11.29□□□□□ -0.6
TRAPPC1-206ENST00000573989 TGFBR3Q03167 851 aa11.29□□□□□ -0.6
TRAPPC1-206ENST00000573989 FAPQ12884 760 aa11.29□□□□□ -0.6
TRAPPC1-206ENST00000573989 SFRP5Q5T4F7 317 aa11.29□□□□□ -0.6
TRAPPC1-206ENST00000573989 ZNF787Q6DD87 383 aa11.29□□□□□ -0.6
TRAPPC1-206ENST00000573989 STAC2Q6ZMT1 411 aa11.29□□□□□ -0.6
TRAPPC1-206ENST00000573989 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.29□□□□□ -0.6
TRAPPC1-206ENST00000573989 SLC46A3Q7Z3Q1 461 aa11.29□□□□□ -0.6
TRAPPC1-206ENST00000573989 TSEN54Q7Z6J9 526 aaKnown RBP11.29□□□□□ -0.6
TRAPPC1-206ENST00000573989 SPATA24Q86W54 205 aa11.29□□□□□ -0.6
TRAPPC1-206ENST00000573989 LSRQ86X29 649 aaPredicted RBP11.29□□□□□ -0.6
TRAPPC1-206ENST00000573989 CXorf67Q86X51 503 aaPredicted RBP11.29□□□□□ -0.6
TRAPPC1-206ENST00000573989 LINC00471Q8N535 108 aa11.29□□□□□ -0.6
TRAPPC1-206ENST00000573989 LRRC17Q8N6Y2 441 aa11.29□□□□□ -0.6
TRAPPC1-206ENST00000573989 ZIC4Q8N9L1 334 aa11.29□□□□□ -0.6
TRAPPC1-206ENST00000573989 OR52J3Q8NH60 311 aa11.29□□□□□ -0.6
TRAPPC1-206ENST00000573989 SLC7A13Q8TCU3 470 aa11.29□□□□□ -0.6
TRAPPC1-206ENST00000573989 DHRS1Q96LJ7 313 aa11.29□□□□□ -0.6
TRAPPC1-206ENST00000573989 ADAD1Q96M93 576 aaKnown RBP11.29□□□□□ -0.6
TRAPPC1-206ENST00000573989 B3GAT2Q9NPZ5 323 aa11.29□□□□□ -0.6
TRAPPC1-206ENST00000573989 TAS2R16Q9NYV7 291 aa11.29□□□□□ -0.6
TRAPPC1-206ENST00000573989 CRIM1Q9NZV1 1036 aa11.29□□□□□ -0.6
TRAPPC1-206ENST00000573989 STX18Q9P2W9 335 aaKnown RBP11.29□□□□□ -0.6
TRAPPC1-206ENST00000573989 MALT1Q9UDY8 824 aa11.29□□□□□ -0.6
TRAPPC1-206ENST00000573989 AURKCQ9UQB9 309 aa11.29□□□□□ -0.6
TRAPPC1-206ENST00000573989 POMPQ9Y244 141 aa11.29□□□□□ -0.6
TRAPPC1-206ENST00000573989 ADGRG4Q8IZF6 3080 aa11.28□□□□□ -0.6
TRAPPC1-206ENST00000573989 DHRS12A0PJE2 317 aa11.28□□□□□ -0.6
TRAPPC1-206ENST00000573989 CIB4A0PJX0 185 aa11.28□□□□□ -0.6
TRAPPC1-206ENST00000573989 ZNF587BE7ETH6 402 aa11.28□□□□□ -0.6
TRAPPC1-206ENST00000573989 PIP5K1CO60331 668 aa11.28□□□□□ -0.6
TRAPPC1-206ENST00000573989 SERPINI2O75830 405 aa11.28□□□□□ -0.6
TRAPPC1-206ENST00000573989 CIB2O75838 187 aa11.28□□□□□ -0.6
TRAPPC1-206ENST00000573989 HPRP00739 348 aa11.28□□□□□ -0.6
TRAPPC1-206ENST00000573989 IGHV3-9P01782 118 aa11.28□□□□□ -0.6
TRAPPC1-206ENST00000573989 DNAJA1P31689 397 aaKnown RBP11.28□□□□□ -0.6
TRAPPC1-206ENST00000573989 SELENOPP49908 381 aa11.28□□□□□ -0.6
TRAPPC1-206ENST00000573989 PRPS1P60891 318 aa11.28□□□□□ -0.6
TRAPPC1-206ENST00000573989 SNTB1Q13884 538 aaKnown RBP11.28□□□□□ -0.6
TRAPPC1-206ENST00000573989 GK3PQ14409 553 aa11.28□□□□□ -0.6
TRAPPC1-206ENST00000573989 IQCCQ4KMZ1 466 aa11.28□□□□□ -0.6
TRAPPC1-206ENST00000573989 HIST2H2BCQ6DN03 193 aa11.28□□□□□ -0.6
TRAPPC1-206ENST00000573989 OR7E24Q6IFN5 339 aa11.28□□□□□ -0.6
TRAPPC1-206ENST00000573989 PODNL1Q6PEZ8 512 aa11.28□□□□□ -0.6
TRAPPC1-206ENST00000573989 TMPRSS11FQ6ZWK6 438 aa11.28□□□□□ -0.6
TRAPPC1-206ENST00000573989 BHLHA15Q7RTS1 189 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC1-206ENST00000573989 OAFQ86UD1 273 aa11.28□□□□□ -0.6
TRAPPC1-206ENST00000573989 GPR137CQ8N3F9 429 aa11.28□□□□□ -0.6
TRAPPC1-206ENST00000573989 LINC01560Q8TB33 94 aa11.28□□□□□ -0.6
TRAPPC1-206ENST00000573989 C14orf79Q96F83 325 aa11.28□□□□□ -0.6
TRAPPC1-206ENST00000573989 ALPK1Q96QP1 1244 aa11.28□□□□□ -0.6
TRAPPC1-206ENST00000573989 LINC00470Q9BZP3 86 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms