RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 RAD51DO75771 328 aa6.87□□□□□ -1.31
SMG6-211ENST00000572369 OR5F1O95221 314 aa6.87□□□□□ -1.31
SMG6-211ENST00000572369 GOSR1O95249 250 aa6.87□□□□□ -1.31
SMG6-211ENST00000572369 CNOT4O95628 575 aaKnown RBP6.87□□□□□ -1.31
SMG6-211ENST00000572369 STAMBPO95630 424 aa6.87□□□□□ -1.31
SMG6-211ENST00000572369 BGLAPP02818 100 aa6.87□□□□□ -1.31
SMG6-211ENST00000572369 THRBP10828 461 aa6.87□□□□□ -1.31
SMG6-211ENST00000572369 CDH2P19022 906 aaPredicted RBP6.87□□□□□ -1.31
SMG6-211ENST00000572369 CALB2P22676 271 aa6.87□□□□□ -1.31
SMG6-211ENST00000572369 IGHV1-2P23083 117 aa6.87□□□□□ -1.31
SMG6-211ENST00000572369 PCSK6P29122 969 aa6.87□□□□□ -1.31
SMG6-211ENST00000572369 CCKARP32238 428 aa6.87□□□□□ -1.31
SMG6-211ENST00000572369 MSX2P35548 267 aaPredicted RBP6.87□□□□□ -1.31
SMG6-211ENST00000572369 IST1P53990 364 aa6.87□□□□□ -1.31
SMG6-211ENST00000572369 TGFBR3Q03167 851 aa6.87□□□□□ -1.31
SMG6-211ENST00000572369 LINC00114Q6XXX2 140 aa6.87□□□□□ -1.31
SMG6-211ENST00000572369 CREB3L2Q70SY1 520 aa6.87□□□□□ -1.31
SMG6-211ENST00000572369 NANOGNBQ7Z5D8 188 aa6.87□□□□□ -1.31
SMG6-211ENST00000572369 VTCN1Q7Z7D3 282 aa6.87□□□□□ -1.31
SMG6-211ENST00000572369 UEVLDQ8IX04 471 aa6.87□□□□□ -1.31
SMG6-211ENST00000572369 GABRG1Q8N1C3 465 aa6.87□□□□□ -1.31
SMG6-211ENST00000572369 GPR137CQ8N3F9 429 aa6.87□□□□□ -1.31
SMG6-211ENST00000572369 POMGNT2Q8NAT1 580 aa6.87□□□□□ -1.31
SMG6-211ENST00000572369 OR5J2Q8NH18 312 aa6.87□□□□□ -1.31
SMG6-211ENST00000572369 TMEM255BQ8WV15 326 aa6.87□□□□□ -1.31
SMG6-211ENST00000572369 TMEM239Q8WW34 195 aa6.87□□□□□ -1.31
SMG6-211ENST00000572369 HSD17B8Q92506 261 aa6.87□□□□□ -1.31
SMG6-211ENST00000572369 MCUR1Q96AQ8 359 aa6.87□□□□□ -1.31
SMG6-211ENST00000572369 TMEM45BQ96B21 275 aa6.87□□□□□ -1.31
SMG6-211ENST00000572369 MUCL1Q96DR8 90 aa6.87□□□□□ -1.31
SMG6-211ENST00000572369 PRRC1Q96M27 445 aa6.87□□□□□ -1.31
SMG6-211ENST00000572369 NSMCE2Q96MF7 247 aa6.87□□□□□ -1.31
SMG6-211ENST00000572369 HS6ST2Q96MM7 605 aa6.87□□□□□ -1.31
SMG6-211ENST00000572369 ZNF385AQ96PM9 386 aaKnown RBP6.87□□□□□ -1.31
SMG6-211ENST00000572369 USB1Q9BQ65 265 aaKnown RBP6.87□□□□□ -1.31
SMG6-211ENST00000572369 SLC19A3Q9BZV2 496 aa6.87□□□□□ -1.31
SMG6-211ENST00000572369 PCDHAC1Q9H158 963 aa6.87□□□□□ -1.31
SMG6-211ENST00000572369 OR10A4Q9H209 315 aa6.87□□□□□ -1.31
SMG6-211ENST00000572369 SLCO5A1Q9H2Y9 848 aa6.87□□□□□ -1.31
SMG6-211ENST00000572369 NANSQ9NR45 359 aa6.87□□□□□ -1.31
SMG6-211ENST00000572369 TAS2R16Q9NYV7 291 aa6.87□□□□□ -1.31
SMG6-211ENST00000572369 RHCGQ9UBD6 479 aa6.87□□□□□ -1.31
SMG6-211ENST00000572369 SEC14L4Q9UDX3 406 aa6.87□□□□□ -1.31
SMG6-211ENST00000572369 MED31Q9Y3C7 131 aa6.87□□□□□ -1.31
SMG6-211ENST00000572369 CORINQ9Y5Q5 1042 aa6.87□□□□□ -1.31
SMG6-211ENST00000572369 OR6C65A6NJZ3 312 aa6.86□□□□□ -1.31
SMG6-211ENST00000572369 ZNF726A6NNF4 738 aa6.86□□□□□ -1.31
SMG6-211ENST00000572369 ZNF587BE7ETH6 402 aa6.86□□□□□ -1.31
SMG6-211ENST00000572369 BLOC1S5-TXNDC5H3BN57 136 aa6.86□□□□□ -1.31
SMG6-211ENST00000572369 J3KTA2 159 aa6.86□□□□□ -1.31
SMG6-211ENST00000572369 RNF13O43567 381 aa6.86□□□□□ -1.31
SMG6-211ENST00000572369 MT-ND1P03886 318 aa6.86□□□□□ -1.31
SMG6-211ENST00000572369 THY1P04216 161 aa6.86□□□□□ -1.31
SMG6-211ENST00000572369 HSD17B1P14061 328 aa6.86□□□□□ -1.31
SMG6-211ENST00000572369 CRYGSP22914 178 aa6.86□□□□□ -1.31
SMG6-211ENST00000572369 EDNRAP25101 427 aa6.86□□□□□ -1.31
SMG6-211ENST00000572369 RBM34P42696 430 aaKnown RBP6.86□□□□□ -1.31
SMG6-211ENST00000572369 SELENOPP49908 381 aa6.86□□□□□ -1.31
SMG6-211ENST00000572369 P2RY4P51582 365 aa6.86□□□□□ -1.31
SMG6-211ENST00000572369 POU3F1Q03052 451 aaPredicted RBP6.86□□□□□ -1.31
SMG6-211ENST00000572369 RUNX1T1Q06455 604 aa6.86□□□□□ -1.31
SMG6-211ENST00000572369 PUDPQ08623 228 aa6.86□□□□□ -1.31
SMG6-211ENST00000572369 PPA1Q15181 289 aa6.86□□□□□ -1.31
SMG6-211ENST00000572369 ZNF74Q16587 644 aa6.86□□□□□ -1.31
SMG6-211ENST00000572369 BEX5Q5H9J7 111 aa6.86□□□□□ -1.31
SMG6-211ENST00000572369 TSPO2Q5TGU0 170 aa6.86□□□□□ -1.31
SMG6-211ENST00000572369 CARD17Q5XLA6 110 aa6.86□□□□□ -1.31
SMG6-211ENST00000572369 HIST2H2BDQ6DRA6 164 aa6.86□□□□□ -1.31
SMG6-211ENST00000572369 OR7E24Q6IFN5 339 aa6.86□□□□□ -1.31
SMG6-211ENST00000572369 HMBOX1Q6NT76 420 aa6.86□□□□□ -1.31
SMG6-211ENST00000572369 KLHL24Q6TFL4 600 aa6.86□□□□□ -1.31
SMG6-211ENST00000572369 ZNF730Q6ZMV8 503 aa6.86□□□□□ -1.31
SMG6-211ENST00000572369 WDR88Q6ZMY6 472 aa6.86□□□□□ -1.31
SMG6-211ENST00000572369 RINLQ6ZS11 566 aa6.86□□□□□ -1.31
SMG6-211ENST00000572369 CDC20BQ86Y33 519 aa6.86□□□□□ -1.31
SMG6-211ENST00000572369 NKAIN4Q8IVV8 208 aa6.86□□□□□ -1.31
SMG6-211ENST00000572369 CDK20Q8IZL9 346 aa6.86□□□□□ -1.31
SMG6-211ENST00000572369 ZNF433Q8N7K0 673 aaPredicted RBP6.86□□□□□ -1.31
SMG6-211ENST00000572369 ZIC4Q8N9L1 334 aa6.86□□□□□ -1.31
SMG6-211ENST00000572369 SCAIQ8N9R8 606 aa6.86□□□□□ -1.31
SMG6-211ENST00000572369 RBM15BQ8NDT2 890 aaKnown RBP6.86□□□□□ -1.31
SMG6-211ENST00000572369 ADPRHL1Q8NDY3 354 aa6.86□□□□□ -1.31
SMG6-211ENST00000572369 OR52N5Q8NH56 324 aa6.86□□□□□ -1.31
SMG6-211ENST00000572369 SGTBQ96EQ0 304 aa6.86□□□□□ -1.31
SMG6-211ENST00000572369 PLPPR2Q96GM1 343 aa6.86□□□□□ -1.31
SMG6-211ENST00000572369 MOGAT1Q96PD6 335 aa6.86□□□□□ -1.31
SMG6-211ENST00000572369 AMBRA1Q9C0C7 1298 aa6.86□□□□□ -1.31
SMG6-211ENST00000572369 ESRP2Q9H6T0 727 aaKnown RBP6.86□□□□□ -1.31
SMG6-211ENST00000572369 FKRPQ9H9S5 495 aa6.86□□□□□ -1.31
SMG6-211ENST00000572369 SLC7A10Q9NS82 523 aa6.86□□□□□ -1.31
SMG6-211ENST00000572369 DCAF13Q9NV06 445 aaKnown RBP6.86□□□□□ -1.31
SMG6-211ENST00000572369 MRPL39Q9NYK5 338 aaKnown RBP6.86□□□□□ -1.31
SMG6-211ENST00000572369 ZNF281Q9Y2X9 895 aa6.86□□□□□ -1.31
SMG6-211ENST00000572369 NOX1Q9Y5S8 564 aa6.86□□□□□ -1.31
SMG6-211ENST00000572369 SNX13Q9Y5W8 968 aa6.86□□□□□ -1.31
SMG6-211ENST00000572369 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.85□□□□□ -1.31
SMG6-211ENST00000572369 A0A1W2PR80 420 aa6.85□□□□□ -1.31
SMG6-211ENST00000572369 MCIDASD6RGH6 385 aa6.85□□□□□ -1.31
SMG6-211ENST00000572369 MS4A18H0YCH9 400 aa6.85□□□□□ -1.31
SMG6-211ENST00000572369 hCG_2039718K7EN88 272 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms