RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 MOSPD2Q8NHP6 518 aa8.41□□□□□ -1.06
NPLOC4-208ENST00000572351 TEX47Q8TBZ9 253 aa8.41□□□□□ -1.06
NPLOC4-208ENST00000572351 CCDC120Q96HB5 630 aa8.41□□□□□ -1.06
NPLOC4-208ENST00000572351 DMRTA2Q96SC8 542 aa8.41□□□□□ -1.06
NPLOC4-208ENST00000572351 GPA33Q99795 319 aa8.41□□□□□ -1.06
NPLOC4-208ENST00000572351 NIPSNAP1Q9BPW8 284 aa8.41□□□□□ -1.06
NPLOC4-208ENST00000572351 RBM4BQ9BQ04 359 aaKnown RBP8.41□□□□□ -1.06
NPLOC4-208ENST00000572351 C9orf16Q9BUW7 83 aa8.41□□□□□ -1.06
NPLOC4-208ENST00000572351 RBM4Q9BWF3 364 aaKnown RBP8.41□□□□□ -1.06
NPLOC4-208ENST00000572351 SFXN3Q9BWM7 321 aa8.41□□□□□ -1.06
NPLOC4-208ENST00000572351 DGCR6LQ9BY27 220 aa8.41□□□□□ -1.06
NPLOC4-208ENST00000572351 POLDIP3Q9BY77 421 aaKnown RBP8.41□□□□□ -1.06
NPLOC4-208ENST00000572351 C12orf49Q9H741 205 aa8.41□□□□□ -1.06
NPLOC4-208ENST00000572351 DCLRE1BQ9H816 532 aa8.41□□□□□ -1.06
NPLOC4-208ENST00000572351 BCO1Q9HAY6 547 aa8.41□□□□□ -1.06
NPLOC4-208ENST00000572351 MCCC2Q9HCC0 563 aa8.41□□□□□ -1.06
NPLOC4-208ENST00000572351 PAPOLBQ9NRJ5 636 aaKnown RBP8.41□□□□□ -1.06
NPLOC4-208ENST00000572351 INIPQ9NRY2 104 aa8.41□□□□□ -1.06
NPLOC4-208ENST00000572351 TBC1D23Q9NUY8 699 aa8.41□□□□□ -1.06
NPLOC4-208ENST00000572351 TAS2R5Q9NYW4 299 aa8.41□□□□□ -1.06
NPLOC4-208ENST00000572351 Q9UFV3 132 aa8.41□□□□□ -1.06
NPLOC4-208ENST00000572351 ERRFI1Q9UJM3 462 aaPredicted RBP8.41□□□□□ -1.06
NPLOC4-208ENST00000572351 PROCRQ9UNN8 238 aa8.41□□□□□ -1.06
NPLOC4-208ENST00000572351 NOSIPQ9Y314 301 aaKnown RBP8.41□□□□□ -1.06
NPLOC4-208ENST00000572351 ORC6Q9Y5N6 252 aa8.41□□□□□ -1.06
NPLOC4-208ENST00000572351 NOX1Q9Y5S8 564 aa8.41□□□□□ -1.06
NPLOC4-208ENST00000572351 IGKV3D-15A0A087WSY6 115 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 LOC102725191A0A1B0GVB3 256 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 MS4A18H0YCH9 400 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 PDLIM1O00151 329 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 KLF4O43474 513 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 MRPL33O75394 65 aaKnown RBP8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 SMNDC1O75940 238 aaKnown RBP eCLIP8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 AGFG2O95081 481 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 SOX14O95416 240 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 BCL10O95999 233 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 F13BP05160 661 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 CRHP06850 196 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 IFNGR1P15260 489 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 BMP5P22003 454 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 IGFBP5P24593 272 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 POU1F1P28069 291 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 UQCRC1P31930 480 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 CEACAM8P31997 349 aaPredicted RBP8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 GSSP48637 474 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 PRSS12P56730 875 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 CLDN17P56750 224 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 CTXN1P60606 82 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 RPS4XP62701 263 aaKnown RBP8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 ZP4Q12836 540 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 COX10Q12887 443 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 FOXF2Q12947 444 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 SLC17A1Q14916 467 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 RFX4Q33E94 735 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 MS4A18Q3C1V0 323 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 CLEC12AQ5QGZ9 265 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 ZNF620Q6ZNG0 422 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 ZBTB49Q6ZSB9 765 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 RASSF6Q6ZTQ3 369 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 CREB3L2Q70SY1 520 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 SLC35D2Q76EJ3 337 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 HDDC2Q7Z4H3 204 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 EPHX4Q8IUS5 362 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 CBR4Q8N4T8 237 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 NAXEQ8NCW5 288 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 OR6K3Q8NGY3 331 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 DNAJC9Q8WXX5 260 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 APH1AQ96BI3 265 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 SAMD8Q96LT4 415 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 ZNF385AQ96PM9 386 aaKnown RBP8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 CIB1Q99828 191 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 KATNB1Q9BVA0 655 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 IFT27Q9BW83 186 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 OSBPL10Q9BXB5 764 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 TEX12Q9BXU0 123 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 GABARAPL1Q9H0R8 117 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 OR52D1Q9H346 318 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 EGLN3Q9H6Z9 239 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 SMURF2Q9HAU4 748 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 SLC24A3Q9HC58 644 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 KRT84Q9NSB2 600 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 PARPBPQ9NWS1 579 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 B3GAT1Q9P2W7 334 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 STX18Q9P2W9 335 aaKnown RBP8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 GRHPRQ9UBQ7 328 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 IL20RAQ9UHF4 553 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 ENOPH1Q9UHY7 261 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 RNF6Q9Y252 685 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 SIGLEC7Q9Y286 467 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 POFUT2Q9Y2G5 429 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 FLVCR1Q9Y5Y0 555 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 CDH10Q9Y6N8 788 aa8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 KMT2BQ9UMN6 2715 aaPredicted RBP8.4□□□□□ -1.06
NPLOC4-208ENST00000572351 ATRXP46100 2492 aa8.4□□□□□ -1.07
NPLOC4-208ENST00000572351 TLN1Q9Y490 2541 aaKnown RBP8.39□□□□□ -1.07
NPLOC4-208ENST00000572351 CNTRLQ7Z7A1 2325 aa8.39□□□□□ -1.07
NPLOC4-208ENST00000572351 EEF1E1-BLOC1S5C9J1V9 151 aa8.39□□□□□ -1.07
NPLOC4-208ENST00000572351 XKRYO14609 159 aa8.39□□□□□ -1.07
NPLOC4-208ENST00000572351 EI24O14681 340 aa8.39□□□□□ -1.07
NPLOC4-208ENST00000572351 EEF1E1O43324 174 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms