RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 MDFIC2A0A1B0GVS7 189 aa8.84□□□□□ -0.99
CTDNEP1-202ENST00000570380 CLPSL1A2RUU4 121 aa8.84□□□□□ -0.99
CTDNEP1-202ENST00000570380 ZNF99A8MXY4 864 aaPredicted RBP8.84□□□□□ -0.99
CTDNEP1-202ENST00000570380 H3BQF6 201 aa8.84□□□□□ -0.99
CTDNEP1-202ENST00000570380 LSM1O15116 133 aaKnown RBP8.84□□□□□ -0.99
CTDNEP1-202ENST00000570380 CFLARO15519 480 aa8.84□□□□□ -0.99
CTDNEP1-202ENST00000570380 ZSCAN12O43309 604 aa8.84□□□□□ -0.99
CTDNEP1-202ENST00000570380 FOXH1O75593 365 aa8.84□□□□□ -0.99
CTDNEP1-202ENST00000570380 NGFP01138 241 aa8.84□□□□□ -0.99
CTDNEP1-202ENST00000570380 GUSBP08236 651 aa8.84□□□□□ -0.99
CTDNEP1-202ENST00000570380 SNRPAP09012 282 aaKnown RBP8.84□□□□□ -0.99
CTDNEP1-202ENST00000570380 IGHV4-38-2P0DP08 117 aa8.84□□□□□ -0.99
CTDNEP1-202ENST00000570380 CD79AP11912 226 aa8.84□□□□□ -0.99
CTDNEP1-202ENST00000570380 SELEP16581 610 aa8.84□□□□□ -0.99
CTDNEP1-202ENST00000570380 SOAT1P35610 550 aa8.84□□□□□ -0.99
CTDNEP1-202ENST00000570380 RBMXP38159 391 aaKnown RBP8.84□□□□□ -0.99
CTDNEP1-202ENST00000570380 MTNR1AP48039 350 aa8.84□□□□□ -0.99
CTDNEP1-202ENST00000570380 GALK2Q01415 458 aa8.84□□□□□ -0.99
CTDNEP1-202ENST00000570380 FUT5Q11128 374 aa8.84□□□□□ -0.99
CTDNEP1-202ENST00000570380 BNIP2Q12982 314 aa8.84□□□□□ -0.99
CTDNEP1-202ENST00000570380 TAF9Q16594 264 aa8.84□□□□□ -0.99
CTDNEP1-202ENST00000570380 GSG1Q2KHT4 349 aa8.84□□□□□ -0.99
CTDNEP1-202ENST00000570380 PCGF3Q3KNV8 242 aa8.84□□□□□ -0.99
CTDNEP1-202ENST00000570380 GALNTL6Q49A17 601 aa8.84□□□□□ -0.99
CTDNEP1-202ENST00000570380 PHYHD1Q5SRE7 291 aa8.84□□□□□ -0.99
CTDNEP1-202ENST00000570380 PRAMEF8Q5VWM4 474 aa8.84□□□□□ -0.99
CTDNEP1-202ENST00000570380 PRAMEF7Q5VXH5 474 aa8.84□□□□□ -0.99
CTDNEP1-202ENST00000570380 TMEM154Q6P9G4 183 aa8.84□□□□□ -0.99
CTDNEP1-202ENST00000570380 FRRS1Q6ZNA5 592 aa8.84□□□□□ -0.99
CTDNEP1-202ENST00000570380 GPR137CQ8N3F9 429 aa8.84□□□□□ -0.99
CTDNEP1-202ENST00000570380 BHLHE22Q8NFJ8 381 aaPredicted RBP8.84□□□□□ -0.99
CTDNEP1-202ENST00000570380 ST7LQ8TDW4 575 aa8.84□□□□□ -0.99
CTDNEP1-202ENST00000570380 COQ8BQ96D53 544 aa8.84□□□□□ -0.99
CTDNEP1-202ENST00000570380 KTI12Q96EK9 354 aaPredicted RBP8.84□□□□□ -0.99
CTDNEP1-202ENST00000570380 TIMD4Q96H15 378 aa8.84□□□□□ -0.99
CTDNEP1-202ENST00000570380 SLC35G5Q96KT7 338 aa8.84□□□□□ -0.99
CTDNEP1-202ENST00000570380 TAPBPLQ9BX59 468 aa8.84□□□□□ -0.99
CTDNEP1-202ENST00000570380 RAB17Q9H0T7 212 aa8.84□□□□□ -0.99
CTDNEP1-202ENST00000570380 OR51I1Q9H343 314 aa8.84□□□□□ -0.99
CTDNEP1-202ENST00000570380 GRPEL1Q9HAV7 217 aa8.84□□□□□ -0.99
CTDNEP1-202ENST00000570380 ZDHHC18Q9NUE0 388 aa8.84□□□□□ -0.99
CTDNEP1-202ENST00000570380 NKIRAS2Q9NYR9 191 aa8.84□□□□□ -0.99
CTDNEP1-202ENST00000570380 UBAP1Q9NZ09 502 aa8.84□□□□□ -0.99
CTDNEP1-202ENST00000570380 C1RLQ9NZP8 487 aa8.84□□□□□ -0.99
CTDNEP1-202ENST00000570380 RASD1Q9Y272 281 aa8.84□□□□□ -0.99
CTDNEP1-202ENST00000570380 TMED5Q9Y3A6 229 aa8.84□□□□□ -0.99
CTDNEP1-202ENST00000570380 INSIG2Q9Y5U4 225 aa8.84□□□□□ -0.99
CTDNEP1-202ENST00000570380 IGHV3OR16-10A0A075B7F0 116 aa8.83□□□□□ -1
CTDNEP1-202ENST00000570380 G3V2L1 256 aa8.83□□□□□ -1
CTDNEP1-202ENST00000570380 G3V4G9 280 aa8.83□□□□□ -1
CTDNEP1-202ENST00000570380 FAAHO00519 579 aa8.83□□□□□ -1
CTDNEP1-202ENST00000570380 HOXA3O43365 443 aaPredicted RBP8.83□□□□□ -1
CTDNEP1-202ENST00000570380 FRS3O43559 492 aa8.83□□□□□ -1
CTDNEP1-202ENST00000570380 SLC43A1O75387 559 aa8.83□□□□□ -1
CTDNEP1-202ENST00000570380 LINC00032P0C843 101 aa8.83□□□□□ -1
CTDNEP1-202ENST00000570380 OR12D1P0DN82 309 aa8.83□□□□□ -1
CTDNEP1-202ENST00000570380 ZNF12P17014 697 aa8.83□□□□□ -1
CTDNEP1-202ENST00000570380 CXCR1P25024 350 aa8.83□□□□□ -1
CTDNEP1-202ENST00000570380 RPL3P39023 403 aaKnown RBP8.83□□□□□ -1
CTDNEP1-202ENST00000570380 HLXQ14774 488 aaPredicted RBP8.83□□□□□ -1
CTDNEP1-202ENST00000570380 PTGR1Q14914 329 aa8.83□□□□□ -1
CTDNEP1-202ENST00000570380 HFEQ30201 348 aa8.83□□□□□ -1
CTDNEP1-202ENST00000570380 TIFABQ6ZNK6 161 aa8.83□□□□□ -1
CTDNEP1-202ENST00000570380 C9orf139Q6ZV77 190 aa8.83□□□□□ -1
CTDNEP1-202ENST00000570380 CMIPQ8IY22 773 aa8.83□□□□□ -1
CTDNEP1-202ENST00000570380 FAM110DQ8TAY7 271 aaPredicted RBP8.83□□□□□ -1
CTDNEP1-202ENST00000570380 XAGE5Q8WWM1 108 aa8.83□□□□□ -1
CTDNEP1-202ENST00000570380 GTF3AQ92664 365 aaKnown RBP8.83□□□□□ -1
CTDNEP1-202ENST00000570380 ROPN1LQ96C74 230 aa8.83□□□□□ -1
CTDNEP1-202ENST00000570380 TRIM44Q96DX7 344 aaPredicted RBP8.83□□□□□ -1
CTDNEP1-202ENST00000570380 NAPGQ99747 312 aaPredicted RBP8.83□□□□□ -1
CTDNEP1-202ENST00000570380 DECR2Q9NUI1 292 aa8.83□□□□□ -1
CTDNEP1-202ENST00000570380 EXD2Q9NVH0 621 aa8.83□□□□□ -1
CTDNEP1-202ENST00000570380 ZNF224Q9NZL3 707 aa8.83□□□□□ -1
CTDNEP1-202ENST00000570380 SLC7A8Q9UHI5 535 aa8.83□□□□□ -1
CTDNEP1-202ENST00000570380 RCE1Q9Y256 329 aa8.83□□□□□ -1
CTDNEP1-202ENST00000570380 POLR3KQ9Y2Y1 108 aaPredicted RBP8.83□□□□□ -1
CTDNEP1-202ENST00000570380 FIS1Q9Y3D6 152 aa8.83□□□□□ -1
CTDNEP1-202ENST00000570380 TET2Q6N021 2002 aaPredicted RBP8.83□□□□□ -1
CTDNEP1-202ENST00000570380 COL7A1Q02388 2944 aa8.82□□□□□ -1
CTDNEP1-202ENST00000570380 IGLV3-9A0A075B6K5 115 aa8.82□□□□□ -1
CTDNEP1-202ENST00000570380 PRAMEF27A3QJZ7 478 aa8.82□□□□□ -1
CTDNEP1-202ENST00000570380 ISPDA4D126 451 aa8.82□□□□□ -1
CTDNEP1-202ENST00000570380 TPD52L2O43399 206 aaKnown RBP8.82□□□□□ -1
CTDNEP1-202ENST00000570380 NDUFA7O95182 113 aa8.82□□□□□ -1
CTDNEP1-202ENST00000570380 IGHMP01871 453 aa8.82□□□□□ -1
CTDNEP1-202ENST00000570380 CRYBA1P05813 215 aa8.82□□□□□ -1
CTDNEP1-202ENST00000570380 NEFHP12036 1026 aa8.82□□□□□ -1
CTDNEP1-202ENST00000570380 ZNF250P15622 560 aa8.82□□□□□ -1
CTDNEP1-202ENST00000570380 ZNF43P17038 809 aa8.82□□□□□ -1
CTDNEP1-202ENST00000570380 GIPRP48546 466 aa8.82□□□□□ -1
CTDNEP1-202ENST00000570380 PTDSS1P48651 473 aaKnown RBP8.82□□□□□ -1
CTDNEP1-202ENST00000570380 GNG11P61952 73 aa8.82□□□□□ -1
CTDNEP1-202ENST00000570380 RAB1AP62820 205 aa8.82□□□□□ -1
CTDNEP1-202ENST00000570380 EPS8Q12929 822 aa8.82□□□□□ -1
CTDNEP1-202ENST00000570380 RAB39AQ14964 217 aa8.82□□□□□ -1
CTDNEP1-202ENST00000570380 TSTQ16762 297 aaKnown RBP8.82□□□□□ -1
CTDNEP1-202ENST00000570380 KPRPQ5T749 579 aaPredicted RBP8.82□□□□□ -1
CTDNEP1-202ENST00000570380 C1orf140Q5VVS0 124 aa8.82□□□□□ -1
CTDNEP1-202ENST00000570380 RGS7BPQ6MZT1 257 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms