RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 PCDHAC1Q9H158 963 aa14.91□□□□□ -0.02
MAP1LC3B-208ENST00000570189 SELENONQ9NZV5 590 aa14.91□□□□□ -0.02
MAP1LC3B-208ENST00000570189 SEC14L4Q9UDX3 406 aa14.91□□□□□ -0.02
MAP1LC3B-208ENST00000570189 GDF2Q9UK05 429 aaPredicted RBP14.91□□□□□ -0.02
MAP1LC3B-208ENST00000570189 SLC13A4Q9UKG4 626 aa14.91□□□□□ -0.02
MAP1LC3B-208ENST00000570189 MS4A18H0YCH9 400 aa14.9□□□□□ -0.02
MAP1LC3B-208ENST00000570189 NDUFS7O75251 213 aa14.9□□□□□ -0.02
MAP1LC3B-208ENST00000570189 SLC43A1O75387 559 aa14.9□□□□□ -0.02
MAP1LC3B-208ENST00000570189 SASH3O75995 380 aa14.9□□□□□ -0.02
MAP1LC3B-208ENST00000570189 PDE5AO76074 875 aa14.9□□□□□ -0.02
MAP1LC3B-208ENST00000570189 MT-ATP6P00846 226 aa14.9□□□□□ -0.02
MAP1LC3B-208ENST00000570189 IGKV3-15P01624 115 aa14.9□□□□□ -0.02
MAP1LC3B-208ENST00000570189 BMP4P12644 408 aa14.9□□□□□ -0.02
MAP1LC3B-208ENST00000570189 PCGF2P35227 344 aa14.9□□□□□ -0.02
MAP1LC3B-208ENST00000570189 FABP6P51161 128 aa14.9□□□□□ -0.02
MAP1LC3B-208ENST00000570189 CLDN17P56750 224 aa14.9□□□□□ -0.02
MAP1LC3B-208ENST00000570189 LGALS3BPQ08380 585 aa14.9□□□□□ -0.02
MAP1LC3B-208ENST00000570189 CYP51A1Q16850 503 aa14.9□□□□□ -0.02
MAP1LC3B-208ENST00000570189 MS4A18Q3C1V0 323 aa14.9□□□□□ -0.02
MAP1LC3B-208ENST00000570189 HMBOX1Q6NT76 420 aa14.9□□□□□ -0.02
MAP1LC3B-208ENST00000570189 ZNF627Q7L945 461 aa14.9□□□□□ -0.02
MAP1LC3B-208ENST00000570189 PATL1Q86TB9 770 aaKnown RBP14.9□□□□□ -0.02
MAP1LC3B-208ENST00000570189 CCDC36Q8IYA8 594 aa14.9□□□□□ -0.02
MAP1LC3B-208ENST00000570189 PIK3C3Q8NEB9 887 aa14.9□□□□□ -0.02
MAP1LC3B-208ENST00000570189 OR2M2Q96R28 347 aa14.9□□□□□ -0.02
MAP1LC3B-208ENST00000570189 WFDC6Q9BQY6 131 aa14.9□□□□□ -0.02
MAP1LC3B-208ENST00000570189 NPHS2Q9NP85 383 aa14.9□□□□□ -0.02
MAP1LC3B-208ENST00000570189 MRPL39Q9NYK5 338 aaKnown RBP14.9□□□□□ -0.02
MAP1LC3B-208ENST00000570189 A0A096LNT2 108 aa14.89□□□□□ -0.03
MAP1LC3B-208ENST00000570189 IGHV1-18A0A0C4DH31 117 aa14.89□□□□□ -0.03
MAP1LC3B-208ENST00000570189 RNF223E7ERA6 249 aa14.89□□□□□ -0.03
MAP1LC3B-208ENST00000570189 ATP6V1G2-DDX39BF2Z307 99 aa14.89□□□□□ -0.03
MAP1LC3B-208ENST00000570189 CHP2O43745 196 aa14.89□□□□□ -0.03
MAP1LC3B-208ENST00000570189 NPPAP01160 153 aa14.89□□□□□ -0.03
MAP1LC3B-208ENST00000570189 AQP1P29972 269 aa14.89□□□□□ -0.03
MAP1LC3B-208ENST00000570189 GZMMP51124 257 aa14.89□□□□□ -0.03
MAP1LC3B-208ENST00000570189 CDH12P55289 794 aa14.89□□□□□ -0.03
MAP1LC3B-208ENST00000570189 ROR2Q01974 943 aaKnown RBP14.89□□□□□ -0.03
MAP1LC3B-208ENST00000570189 CHRNB3Q05901 458 aa14.89□□□□□ -0.03
MAP1LC3B-208ENST00000570189 SELPLGQ14242 412 aa14.89□□□□□ -0.03
MAP1LC3B-208ENST00000570189 DUSP7Q16829 419 aa14.89□□□□□ -0.03
MAP1LC3B-208ENST00000570189 SWI5Q1ZZU3 235 aa14.89□□□□□ -0.03
MAP1LC3B-208ENST00000570189 TRMT5Q32P41 509 aaKnown RBP14.89□□□□□ -0.03
MAP1LC3B-208ENST00000570189 INTS11Q5TA45 600 aaKnown RBP14.89□□□□□ -0.03
MAP1LC3B-208ENST00000570189 KDM8Q8N371 416 aa14.89□□□□□ -0.03
MAP1LC3B-208ENST00000570189 GPR32P1Q8NGA4 272 aa14.89□□□□□ -0.03
MAP1LC3B-208ENST00000570189 RASSF5Q8WWW0 418 aa14.89□□□□□ -0.03
MAP1LC3B-208ENST00000570189 ZNF426Q9BUY5 554 aa14.89□□□□□ -0.03
MAP1LC3B-208ENST00000570189 C1QTNF6Q9BXI9 259 aa14.89□□□□□ -0.03
MAP1LC3B-208ENST00000570189 GPR35Q9HC97 309 aa14.89□□□□□ -0.03
MAP1LC3B-208ENST00000570189 JMJD1CQ15652 2540 aa14.89□□□□□ -0.03
MAP1LC3B-208ENST00000570189 A0A0G2JND7 137 aa14.88□□□□□ -0.03
MAP1LC3B-208ENST00000570189 ZNF99A8MXY4 864 aaPredicted RBP14.88□□□□□ -0.03
MAP1LC3B-208ENST00000570189 M0QX08 132 aa14.88□□□□□ -0.03
MAP1LC3B-208ENST00000570189 MTPNP58546 118 aa14.88□□□□□ -0.03
MAP1LC3B-208ENST00000570189 UBE2NP61088 152 aaKnown RBP14.88□□□□□ -0.03
MAP1LC3B-208ENST00000570189 C1DQ13901 141 aaKnown RBP14.88□□□□□ -0.03
MAP1LC3B-208ENST00000570189 NFYCQ13952 458 aa14.88□□□□□ -0.03
MAP1LC3B-208ENST00000570189 CCDC80Q76M96 950 aa14.88□□□□□ -0.03
MAP1LC3B-208ENST00000570189 PXKQ7Z7A4 578 aa14.88□□□□□ -0.03
MAP1LC3B-208ENST00000570189 UEVLDQ8IX04 471 aa14.88□□□□□ -0.03
MAP1LC3B-208ENST00000570189 GPR137CQ8N3F9 429 aa14.88□□□□□ -0.03
MAP1LC3B-208ENST00000570189 MCHR1Q99705 422 aa14.88□□□□□ -0.03
MAP1LC3B-208ENST00000570189 PRR14Q9BWN1 585 aa14.88□□□□□ -0.03
MAP1LC3B-208ENST00000570189 ASPNQ9BXN1 380 aa14.88□□□□□ -0.03
MAP1LC3B-208ENST00000570189 SLC19A3Q9BZV2 496 aa14.88□□□□□ -0.03
MAP1LC3B-208ENST00000570189 FBXO9Q9UK97 447 aaPredicted RBP14.88□□□□□ -0.03
MAP1LC3B-208ENST00000570189 NOX1Q9Y5S8 564 aa14.88□□□□□ -0.03
MAP1LC3B-208ENST00000570189 ATP23Q9Y6H3 246 aa14.88□□□□□ -0.03
MAP1LC3B-208ENST00000570189 ANK3Q12955 4377 aaKnown RBP14.87□□□□□ -0.03
MAP1LC3B-208ENST00000570189 FBP2O00757 339 aa14.87□□□□□ -0.03
MAP1LC3B-208ENST00000570189 TLX2O43763 284 aaPredicted RBP14.87□□□□□ -0.03
MAP1LC3B-208ENST00000570189 LYPD3O95274 346 aa14.87□□□□□ -0.03
MAP1LC3B-208ENST00000570189 HPRP00739 348 aa14.87□□□□□ -0.03
MAP1LC3B-208ENST00000570189 CRYAAP02489 173 aa14.87□□□□□ -0.03
MAP1LC3B-208ENST00000570189 CSF3P09919 207 aa14.87□□□□□ -0.03
MAP1LC3B-208ENST00000570189 CBR1P16152 277 aa14.87□□□□□ -0.03
MAP1LC3B-208ENST00000570189 CDH2P19022 906 aaPredicted RBP14.87□□□□□ -0.03
MAP1LC3B-208ENST00000570189 CD247P20963 164 aa14.87□□□□□ -0.03
MAP1LC3B-208ENST00000570189 NUDT6P53370 316 aa14.87□□□□□ -0.03
MAP1LC3B-208ENST00000570189 PPP2R2BQ00005 443 aa14.87□□□□□ -0.03
MAP1LC3B-208ENST00000570189 NAAAQ02083 359 aa14.87□□□□□ -0.03
MAP1LC3B-208ENST00000570189 PUDPQ08623 228 aa14.87□□□□□ -0.03
MAP1LC3B-208ENST00000570189 RAB35Q15286 201 aa14.87□□□□□ -0.03
MAP1LC3B-208ENST00000570189 NPTX1Q15818 432 aa14.87□□□□□ -0.03
MAP1LC3B-208ENST00000570189 MST1LQ2TV78 715 aa14.87□□□□□ -0.03
MAP1LC3B-208ENST00000570189 NANOGP8Q6NSW7 305 aa14.87□□□□□ -0.03
MAP1LC3B-208ENST00000570189 C20orf196Q8IYI0 205 aa14.87□□□□□ -0.03
MAP1LC3B-208ENST00000570189 SMYD1Q8NB12 490 aa14.87□□□□□ -0.03
MAP1LC3B-208ENST00000570189 NUP37Q8NFH4 326 aa14.87□□□□□ -0.03
MAP1LC3B-208ENST00000570189 OR4F15Q8NGB8 312 aa14.87□□□□□ -0.03
MAP1LC3B-208ENST00000570189 OR8J3Q8NGG0 315 aa14.87□□□□□ -0.03
MAP1LC3B-208ENST00000570189 OR6T1Q8NGN1 323 aa14.87□□□□□ -0.03
MAP1LC3B-208ENST00000570189 THOC1Q96FV9 657 aaKnown RBP14.87□□□□□ -0.03
MAP1LC3B-208ENST00000570189 MPP4Q96JB8 637 aa14.87□□□□□ -0.03
MAP1LC3B-208ENST00000570189 MOGAT1Q96PD6 335 aa14.87□□□□□ -0.03
MAP1LC3B-208ENST00000570189 SH3GL1Q99961 368 aa14.87□□□□□ -0.03
MAP1LC3B-208ENST00000570189 RHNO1Q9BSD3 238 aa14.87□□□□□ -0.03
MAP1LC3B-208ENST00000570189 NANOGQ9H9S0 305 aa14.87□□□□□ -0.03
MAP1LC3B-208ENST00000570189 CRLF2Q9HC73 371 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms