RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 ZNF879B4DU55 563 aa5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 ANKRD28O15084 1053 aa5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 ZNF264O43296 627 aa5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 SPRY3O43610 288 aa5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 ENSAO43768 121 aaKnown RBP5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 SLC25A17O43808 307 aa5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 TOX4O94842 621 aa5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 CLIC3O95833 236 aa5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 JUNP05412 331 aaKnown RBP5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 LIPFP07098 398 aa5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 CD55P08174 381 aa5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 IL3P08700 152 aa5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 QDPRP09417 244 aa5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 RPS2P15880 293 aaKnown RBP5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 PGAM1P18669 254 aa5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 MYF6P23409 242 aa5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 STX2P32856 288 aa5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 LSP1P33241 339 aa5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 CAPZA2P47755 286 aa5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 MMP15P51511 669 aa5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 ZNF75DP51815 510 aa5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 NCBP2P52298 156 aaKnown RBP eCLIP5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 CD83Q01151 205 aa5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 TAGLNQ01995 201 aaKnown RBP5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 LRIG3Q6UXM1 1119 aa5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 ZC3HC1Q86WB0 502 aaKnown RBP5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 PTOV1Q86YD1 416 aa5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 ZNF101Q8IZC7 436 aa5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 TMCO5AQ8N6Q1 288 aa5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 LINC00482Q8N8I6 264 aa5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 CDRT4Q8N9R6 151 aa5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 RFWD2Q8NHY2 731 aa5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 KIF18AQ8NI77 898 aa5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 C10orf82Q8WW14 230 aa5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 NSMAFQ92636 917 aa5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 TFAP2CQ92754 450 aa5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 CERS2Q96G23 380 aa5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 AMDHD1Q96NU7 426 aa5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 FRG2BQ96QU4 278 aa5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 SIGLEC11Q96RL6 698 aa5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 MCRIP2Q9BUT9 160 aaKnown RBP5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 CCDC106Q9BWC9 280 aa5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 HOXD1Q9GZZ0 328 aa5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 A4GALTQ9NPC4 353 aa5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 NUDT4Q9NZJ9 180 aa5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 PLA2G2EQ9NZK7 142 aa5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 MIOXQ9UGB7 285 aa5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 TFR2Q9UP52 801 aa5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 CAB39Q9Y376 341 aaPredicted RBP5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 FAM96BQ9Y3D0 163 aa5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 ANGPTL3Q9Y5C1 460 aa5.42□□□□□ -1.54
HERPUD1-217ENST00000569429 DNAH2Q9P225 4427 aa5.41□□□□□ -1.54
HERPUD1-217ENST00000569429 A0A1B0GW55 424 aa5.41□□□□□ -1.54
HERPUD1-217ENST00000569429 MIF4GDA9UHW6 222 aaKnown RBP5.41□□□□□ -1.54
HERPUD1-217ENST00000569429 SLC43A1O75387 559 aa5.41□□□□□ -1.54
HERPUD1-217ENST00000569429 URI1O94763 535 aaPredicted RBP5.41□□□□□ -1.54
HERPUD1-217ENST00000569429 HLA-HP01893 362 aa5.41□□□□□ -1.54
HERPUD1-217ENST00000569429 DUX4L2P0CJ85 424 aa5.41□□□□□ -1.54
HERPUD1-217ENST00000569429 DUX4L3P0CJ86 424 aa5.41□□□□□ -1.54
HERPUD1-217ENST00000569429 DUX4L5P0CJ88 424 aa5.41□□□□□ -1.54
HERPUD1-217ENST00000569429 DUX4L6P0CJ89 424 aa5.41□□□□□ -1.54
HERPUD1-217ENST00000569429 DUX4L7P0CJ90 424 aa5.41□□□□□ -1.54
HERPUD1-217ENST00000569429 PRPS2P11908 318 aa5.41□□□□□ -1.54
HERPUD1-217ENST00000569429 IMPDH2P12268 514 aa5.41□□□□□ -1.54
HERPUD1-217ENST00000569429 GATA4P43694 442 aa5.41□□□□□ -1.54
HERPUD1-217ENST00000569429 CCR4P51679 360 aa5.41□□□□□ -1.54
HERPUD1-217ENST00000569429 TERF1P54274 439 aa5.41□□□□□ -1.54
HERPUD1-217ENST00000569429 HEPACAMQ14CZ8 416 aa5.41□□□□□ -1.54
HERPUD1-217ENST00000569429 ARHGAP11BQ3KRB8 267 aa5.41□□□□□ -1.54
HERPUD1-217ENST00000569429 SPRNQ5BIV9 151 aa5.41□□□□□ -1.54
HERPUD1-217ENST00000569429 SPANXN3Q5MJ09 141 aa5.41□□□□□ -1.54
HERPUD1-217ENST00000569429 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.41□□□□□ -1.54
HERPUD1-217ENST00000569429 SLC27A4Q6P1M0 643 aa5.41□□□□□ -1.54
HERPUD1-217ENST00000569429 NIPAL3Q6P499 406 aa5.41□□□□□ -1.54
HERPUD1-217ENST00000569429 DUX4L9Q6RFH8 374 aaPredicted RBP5.41□□□□□ -1.54
HERPUD1-217ENST00000569429 CREB3L2Q70SY1 520 aa5.41□□□□□ -1.54
HERPUD1-217ENST00000569429 PIWIL3Q7Z3Z3 882 aaKnown RBP5.41□□□□□ -1.54
HERPUD1-217ENST00000569429 LRRC57Q8N9N7 239 aa5.41□□□□□ -1.54
HERPUD1-217ENST00000569429 STAG3L4Q8TBR4 150 aa5.41□□□□□ -1.54
HERPUD1-217ENST00000569429 NPRL2Q8WTW4 380 aa5.41□□□□□ -1.54
HERPUD1-217ENST00000569429 GEMIN6Q8WXD5 167 aaKnown RBP5.41□□□□□ -1.54
HERPUD1-217ENST00000569429 EXT2Q93063 718 aa5.41□□□□□ -1.54
HERPUD1-217ENST00000569429 LHX4Q969G2 390 aa5.41□□□□□ -1.54
HERPUD1-217ENST00000569429 CCDC126Q96EE4 140 aa5.41□□□□□ -1.54
HERPUD1-217ENST00000569429 NEIL1Q96FI4 390 aaPredicted RBP5.41□□□□□ -1.54
HERPUD1-217ENST00000569429 WDFY2Q96P53 400 aa5.41□□□□□ -1.54
HERPUD1-217ENST00000569429 ATOH8Q96SQ7 321 aa5.41□□□□□ -1.54
HERPUD1-217ENST00000569429 THUMPD3Q9BV44 507 aaKnown RBP5.41□□□□□ -1.54
HERPUD1-217ENST00000569429 ACTRT3Q9BYD9 372 aa5.41□□□□□ -1.54
HERPUD1-217ENST00000569429 OR11A1Q9GZK7 315 aa5.41□□□□□ -1.54
HERPUD1-217ENST00000569429 WNT10AQ9GZT5 417 aa5.41□□□□□ -1.54
HERPUD1-217ENST00000569429 GLIPR2Q9H4G4 154 aa5.41□□□□□ -1.54
HERPUD1-217ENST00000569429 RAB18Q9NP72 206 aa5.41□□□□□ -1.54
HERPUD1-217ENST00000569429 EQTNQ9NQ60 294 aa5.41□□□□□ -1.54
HERPUD1-217ENST00000569429 CTPS2Q9NRF8 586 aa5.41□□□□□ -1.54
HERPUD1-217ENST00000569429 DUX4Q9UBX2 424 aa5.41□□□□□ -1.54
HERPUD1-217ENST00000569429 FBXL3Q9UKT7 428 aa5.41□□□□□ -1.54
HERPUD1-217ENST00000569429 ZDHHC8Q9ULC8 765 aa5.41□□□□□ -1.54
HERPUD1-217ENST00000569429 SLC12A4Q9UP95 1085 aa5.41□□□□□ -1.54
HERPUD1-217ENST00000569429 MAB21L2Q9Y586 359 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms