RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 IFNGR1P15260 489 aa13.41□□□□□ -0.26
NME3-211ENST00000568561 SRP14P37108 136 aaKnown RBP13.41□□□□□ -0.26
NME3-211ENST00000568561 CHN2P52757 468 aa13.41□□□□□ -0.26
NME3-211ENST00000568561 C1DQ13901 141 aaKnown RBP13.41□□□□□ -0.26
NME3-211ENST00000568561 DAG1Q14118 895 aa13.41□□□□□ -0.26
NME3-211ENST00000568561 MSMPQ1L6U9 139 aa13.41□□□□□ -0.26
NME3-211ENST00000568561 PDCD4Q53EL6 469 aaKnown RBP13.41□□□□□ -0.26
NME3-211ENST00000568561 C6orf10Q5SRN2 563 aa13.41□□□□□ -0.26
NME3-211ENST00000568561 CEP85LQ5SZL2 805 aa13.41□□□□□ -0.26
NME3-211ENST00000568561 HHATQ5VTY9 493 aa13.41□□□□□ -0.26
NME3-211ENST00000568561 LIPNQ5VXI9 398 aa13.41□□□□□ -0.26
NME3-211ENST00000568561 CARD17Q5XLA6 110 aa13.41□□□□□ -0.26
NME3-211ENST00000568561 COMTD1Q86VU5 262 aa13.41□□□□□ -0.26
NME3-211ENST00000568561 MREGQ8N565 214 aa13.41□□□□□ -0.26
NME3-211ENST00000568561 GLB1L3Q8NCI6 653 aaPredicted RBP13.41□□□□□ -0.26
NME3-211ENST00000568561 MGARPQ8TDB4 240 aa13.41□□□□□ -0.26
NME3-211ENST00000568561 TAAR8Q969N4 342 aa13.41□□□□□ -0.26
NME3-211ENST00000568561 OR2M2Q96R28 347 aa13.41□□□□□ -0.26
NME3-211ENST00000568561 RSPO3Q9BXY4 272 aaPredicted RBP13.41□□□□□ -0.26
NME3-211ENST00000568561 CACYBPQ9HB71 228 aaKnown RBP13.41□□□□□ -0.26
NME3-211ENST00000568561 TMEFF2Q9UIK5 374 aaPredicted RBP13.41□□□□□ -0.26
NME3-211ENST00000568561 ZNF232Q9UNY5 417 aa13.41□□□□□ -0.26
NME3-211ENST00000568561 A0A0G2JPF8 293 aa13.4□□□□□ -0.26
NME3-211ENST00000568561 HNRNPCL2B2RXH8 293 aa13.4□□□□□ -0.26
NME3-211ENST00000568561 HNRNPCL3B7ZW38 293 aa13.4□□□□□ -0.26
NME3-211ENST00000568561 RPL36A-HNRNPH2H7BZ11 118 aa13.4□□□□□ -0.26
NME3-211ENST00000568561 M0R3G1 203 aa13.4□□□□□ -0.26
NME3-211ENST00000568561 TRAF3IP2O43734 574 aaPredicted RBP13.4□□□□□ -0.26
NME3-211ENST00000568561 HNRNPCL1O60812 293 aaKnown RBP13.4□□□□□ -0.26
NME3-211ENST00000568561 HLA-HP01893 362 aa13.4□□□□□ -0.26
NME3-211ENST00000568561 ERCC1P07992 297 aaPredicted RBP13.4□□□□□ -0.26
NME3-211ENST00000568561 HNRNPCL4P0DMR1 293 aa13.4□□□□□ -0.26
NME3-211ENST00000568561 HTR2AP28223 471 aa13.4□□□□□ -0.26
NME3-211ENST00000568561 GRPRP30550 384 aa13.4□□□□□ -0.26
NME3-211ENST00000568561 WDR4P57081 412 aaKnown RBP13.4□□□□□ -0.26
NME3-211ENST00000568561 SLC9B1Q4ZJI4 515 aa13.4□□□□□ -0.26
NME3-211ENST00000568561 WDR93Q6P2C0 686 aa13.4□□□□□ -0.26
NME3-211ENST00000568561 MAVSQ7Z434 540 aa13.4□□□□□ -0.26
NME3-211ENST00000568561 TMEM123Q8N131 208 aa13.4□□□□□ -0.26
NME3-211ENST00000568561 ZNF786Q8N393 782 aa13.4□□□□□ -0.26
NME3-211ENST00000568561 FAM169BQ8N8A8 192 aa13.4□□□□□ -0.26
NME3-211ENST00000568561 LINC01356Q8N9X3 169 aa13.4□□□□□ -0.26
NME3-211ENST00000568561 UBASH3BQ8TF42 649 aa13.4□□□□□ -0.26
NME3-211ENST00000568561 NEU4Q8WWR8 484 aaPredicted RBP13.4□□□□□ -0.26
NME3-211ENST00000568561 MS4A3Q96HJ5 214 aa13.4□□□□□ -0.26
NME3-211ENST00000568561 ANKRD27Q96NW4 1050 aa13.4□□□□□ -0.26
NME3-211ENST00000568561 OXGR1Q96P68 337 aa13.4□□□□□ -0.26
NME3-211ENST00000568561 NARFLQ9H6Q4 476 aa13.4□□□□□ -0.26
NME3-211ENST00000568561 RPS6KB2Q9UBS0 482 aa13.4□□□□□ -0.26
NME3-211ENST00000568561 IGKV1D-42A0A075B6H8 117 aa13.39□□□□□ -0.27
NME3-211ENST00000568561 A0A1B0GWA3 101 aa13.39□□□□□ -0.27
NME3-211ENST00000568561 TMEM247A6NEH6 219 aa13.39□□□□□ -0.27
NME3-211ENST00000568561 TRPC5OSA6NMA1 111 aa13.39□□□□□ -0.27
NME3-211ENST00000568561 AIM2O14862 343 aa13.39□□□□□ -0.27
NME3-211ENST00000568561 TCF21O43680 179 aa13.39□□□□□ -0.27
NME3-211ENST00000568561 HPRP00739 348 aa13.39□□□□□ -0.27
NME3-211ENST00000568561 ZCCHC18P0CG32 403 aa13.39□□□□□ -0.27
NME3-211ENST00000568561 HLA-DOBP13765 273 aa13.39□□□□□ -0.27
NME3-211ENST00000568561 HOXB1P14653 301 aaPredicted RBP13.39□□□□□ -0.27
NME3-211ENST00000568561 IDO1P14902 403 aa13.39□□□□□ -0.27
NME3-211ENST00000568561 PAX7P23759 505 aa13.39□□□□□ -0.27
NME3-211ENST00000568561 ARR3P36575 388 aa13.39□□□□□ -0.27
NME3-211ENST00000568561 CDH15P55291 814 aa13.39□□□□□ -0.27
NME3-211ENST00000568561 RIN1Q13671 783 aa13.39□□□□□ -0.27
NME3-211ENST00000568561 SLC2A7Q6PXP3 512 aa13.39□□□□□ -0.27
NME3-211ENST00000568561 WDFY1Q8IWB7 410 aa13.39□□□□□ -0.27
NME3-211ENST00000568561 RFLNBQ8N5W9 214 aa13.39□□□□□ -0.27
NME3-211ENST00000568561 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.39□□□□□ -0.27
NME3-211ENST00000568561 ITCHQ96J02 903 aa13.39□□□□□ -0.27
NME3-211ENST00000568561 OR52B2Q96RD2 323 aa13.39□□□□□ -0.27
NME3-211ENST00000568561 EMC6Q9BV81 110 aa13.39□□□□□ -0.27
NME3-211ENST00000568561 MRPL37Q9BZE1 423 aaKnown RBP13.39□□□□□ -0.27
NME3-211ENST00000568561 ARMC7Q9H6L4 198 aa13.39□□□□□ -0.27
NME3-211ENST00000568561 MOV10Q9HCE1 1003 aaKnown RBP13.39□□□□□ -0.27
NME3-211ENST00000568561 USP22Q9UPT9 525 aa13.39□□□□□ -0.27
NME3-211ENST00000568561 IFT52Q9Y366 437 aa13.39□□□□□ -0.27
NME3-211ENST00000568561 ZNF99A8MXY4 864 aaPredicted RBP13.38□□□□□ -0.27
NME3-211ENST00000568561 SNNO75324 88 aaPredicted RBP13.38□□□□□ -0.27
NME3-211ENST00000568561 CD79AP11912 226 aa13.38□□□□□ -0.27
NME3-211ENST00000568561 TCN1P20061 433 aaPredicted RBP13.38□□□□□ -0.27
NME3-211ENST00000568561 POLR2JP52435 117 aaKnown RBP13.38□□□□□ -0.27
NME3-211ENST00000568561 AQP5P55064 265 aa13.38□□□□□ -0.27
NME3-211ENST00000568561 PIGFQ07326 219 aa13.38□□□□□ -0.27
NME3-211ENST00000568561 RGNQ15493 299 aa13.38□□□□□ -0.27
NME3-211ENST00000568561 TNFAIP8L3Q5GJ75 292 aa13.38□□□□□ -0.27
NME3-211ENST00000568561 FAM69AQ5T7M9 428 aa13.38□□□□□ -0.27
NME3-211ENST00000568561 C6orf89Q6UWU4 347 aa13.38□□□□□ -0.27
NME3-211ENST00000568561 CARM1Q86X55 608 aa13.38□□□□□ -0.27
NME3-211ENST00000568561 PIK3C3Q8NEB9 887 aa13.38□□□□□ -0.27
NME3-211ENST00000568561 ANKK1Q8NFD2 765 aa13.38□□□□□ -0.27
NME3-211ENST00000568561 BBS10Q8TAM1 723 aa13.38□□□□□ -0.27
NME3-211ENST00000568561 RNF217Q8TC41 542 aa13.38□□□□□ -0.27
NME3-211ENST00000568561 HPS1Q92902 700 aa13.38□□□□□ -0.27
NME3-211ENST00000568561 SYT3Q9BQG1 590 aa13.38□□□□□ -0.27
NME3-211ENST00000568561 PAIP1Q9H074 479 aaKnown RBP13.38□□□□□ -0.27
NME3-211ENST00000568561 RMND5AQ9H871 391 aa13.38□□□□□ -0.27
NME3-211ENST00000568561 LPAR2Q9HBW0 351 aa13.38□□□□□ -0.27
NME3-211ENST00000568561 A4GALTQ9NPC4 353 aa13.38□□□□□ -0.27
NME3-211ENST00000568561 ZIM2Q9NZV7 527 aa13.38□□□□□ -0.27
NME3-211ENST00000568561 KLHL14Q9P2G3 628 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms