RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 NFATC4Q14934 902 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 TRMT12Q53H54 448 aaKnown RBP10.04□□□□□ -0.8
PALB2-206ENST00000568219 TMEM255AQ5JRV8 349 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 OR2W3Q7Z3T1 314 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 TMPRSS9Q7Z410 1059 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 WDSUB1Q8N9V3 476 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 KREMEN2Q8NCW0 462 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 OR51Q1Q8NH59 317 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 OR14C36Q8NHC7 312 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 PHOSPHO1Q8TCT1 267 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 PPP1R1CQ8WVI7 109 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 TCTEX1D2Q8WW35 142 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 FOXRED1Q96CU9 486 aaPredicted RBP10.04□□□□□ -0.8
PALB2-206ENST00000568219 SHARPINQ9H0F6 387 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 SIRT3Q9NTG7 399 aaPredicted RBP10.04□□□□□ -0.8
PALB2-206ENST00000568219 OPN4Q9UHM6 478 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 PRAMEF27A3QJZ7 478 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 PRKNO60260 465 aaPredicted RBP10.04□□□□□ -0.8
PALB2-206ENST00000568219 MED6O75586 246 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 CSTAP01040 98 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 OR2T7P0C7T2 308 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 TPT1P13693 172 aaKnown RBP10.04□□□□□ -0.8
PALB2-206ENST00000568219 CDK5R1Q15078 307 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 DUSP5Q16690 384 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 LIPNQ5VXI9 398 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 PLPP4Q5VZY2 271 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 EIF5AL1Q6IS14 154 aaKnown RBP10.04□□□□□ -0.8
PALB2-206ENST00000568219 RPL13AP3Q6NVV1 102 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 TMEM200AQ86VY9 491 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 OR2L5Q8NG80 312 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 OR2T27Q8NH04 317 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 MFSD8Q8NHS3 518 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 SMIM19Q96E16 107 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 PHB2Q99623 299 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 RSRP1Q9BUV0 290 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 TGIF2Q9GZN2 237 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 SYNDIG1Q9H7V2 258 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 PHPT1Q9NRX4 125 aaPredicted RBP10.04□□□□□ -0.8
PALB2-206ENST00000568219 URADA6NGE7 173 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 C1QTNF3-AMACRE9PGA6 284 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 AGR2O95994 175 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 KNG1P01042 644 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 ILF3Q12906 894 aaKnown RBP eCLIP10.04□□□□□ -0.86e-11■■■■□ 20.3
PALB2-206ENST00000568219 MORN1Q5T089 497 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 ZNF836Q6ZNA1 936 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 GAREM2Q75VX8 874 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 RFLNBQ8N5W9 214 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 NAXEQ8NCW5 288 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 SULT4A1Q9BR01 284 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 ZNF700Q9H0M5 742 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 ACKR4Q9NPB9 350 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 SPHK2Q9NRA0 654 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 CMC2Q9NRP2 79 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 CLDND1Q9NY35 253 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 TMEM189-UBE2V1I3L0A0 370 aa10.03□□□□□ -0.8
PALB2-206ENST00000568219 PLPP2O43688 288 aa10.03□□□□□ -0.8
PALB2-206ENST00000568219 LY86O95711 162 aa10.03□□□□□ -0.8
PALB2-206ENST00000568219 HOXB5P09067 269 aa10.03□□□□□ -0.8
PALB2-206ENST00000568219 ZNF888P0CJ79 500 aaPredicted RBP10.03□□□□□ -0.8
PALB2-206ENST00000568219 NFYBP25208 207 aa10.03□□□□□ -0.8
PALB2-206ENST00000568219 RPS10P46783 165 aaKnown RBP10.03□□□□□ -0.8
PALB2-206ENST00000568219 NTHL1P78549 312 aa10.03□□□□□ -0.8
PALB2-206ENST00000568219 DEFA6Q01524 100 aa10.03□□□□□ -0.8
PALB2-206ENST00000568219 KLF9Q13886 244 aaPredicted RBP10.03□□□□□ -0.8
PALB2-206ENST00000568219 SLC25A24Q6NUK1 477 aa10.03□□□□□ -0.8
PALB2-206ENST00000568219 ZNF529Q6P280 563 aa10.03□□□□□ -0.8
PALB2-206ENST00000568219 GPR148Q8TDV2 347 aa10.03□□□□□ -0.8
PALB2-206ENST00000568219 GAL3ST4Q96RP7 486 aa10.03□□□□□ -0.8
PALB2-206ENST00000568219 INPP5EQ9NRR6 644 aa10.03□□□□□ -0.8
PALB2-206ENST00000568219 CGGBP1Q9UFW8 167 aaPredicted RBP10.03□□□□□ -0.8
PALB2-206ENST00000568219 NDRG3Q9UGV2 375 aa10.03□□□□□ -0.8
PALB2-206ENST00000568219 DHDHQ9UQ10 334 aa10.03□□□□□ -0.8
PALB2-206ENST00000568219 OR51B4Q9Y5P0 310 aa10.03□□□□□ -0.8
PALB2-206ENST00000568219 MGAMO43451 1857 aa10.03□□□□□ -0.8
PALB2-206ENST00000568219 RENP00797 406 aa10.03□□□□□ -0.8
PALB2-206ENST00000568219 CRYBA1P05813 215 aa10.03□□□□□ -0.8
PALB2-206ENST00000568219 HOXB3P14651 431 aaPredicted RBP10.03□□□□□ -0.8
PALB2-206ENST00000568219 NQO2P16083 231 aa10.03□□□□□ -0.8
PALB2-206ENST00000568219 ITPRIPL2Q3MIP1 535 aa10.03□□□□□ -0.8
PALB2-206ENST00000568219 CD200R1LQ6Q8B3 271 aa10.03□□□□□ -0.8
PALB2-206ENST00000568219 SLC29A4Q7RTT9 530 aa10.03□□□□□ -0.8
PALB2-206ENST00000568219 DIO2Q92813 273 aa10.03□□□□□ -0.8
PALB2-206ENST00000568219 Q96M85 177 aa10.03□□□□□ -0.8
PALB2-206ENST00000568219 CASD1Q96PB1 797 aa10.03□□□□□ -0.8
PALB2-206ENST00000568219 CPEB1Q9BZB8 566 aaKnown RBP10.03□□□□□ -0.8
PALB2-206ENST00000568219 ZDHHC5Q9C0B5 715 aa10.03□□□□□ -0.8
PALB2-206ENST00000568219 SLC25A32Q9H2D1 315 aa10.03□□□□□ -0.8
PALB2-206ENST00000568219 OR6C68A6NDL8 312 aa10.03□□□□□ -0.8
PALB2-206ENST00000568219 MAN2B1O00754 1011 aa10.03□□□□□ -0.8
PALB2-206ENST00000568219 NDUFB6O95139 128 aa10.03□□□□□ -0.8
PALB2-206ENST00000568219 TXNDC12O95881 172 aa10.03□□□□□ -0.8
PALB2-206ENST00000568219 OR4E1P0C645 316 aa10.03□□□□□ -0.8
PALB2-206ENST00000568219 PI3P19957 117 aa10.03□□□□□ -0.8
PALB2-206ENST00000568219 BTCP35070 178 aa10.03□□□□□ -0.8
PALB2-206ENST00000568219 RGS19P49795 217 aa10.03□□□□□ -0.8
PALB2-206ENST00000568219 MRPS10P82664 201 aaKnown RBP10.03□□□□□ -0.8
PALB2-206ENST00000568219 PRDX1Q06830 199 aaKnown RBP10.03□□□□□ -0.8
PALB2-206ENST00000568219 EBPQ15125 230 aaKnown RBP10.03□□□□□ -0.8
PALB2-206ENST00000568219 EIF2S3LQ2VIR3 472 aaKnown RBP10.03□□□□□ -0.8
PALB2-206ENST00000568219 DCST2Q5T1A1 773 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms