RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 TSPAN19P0C672 248 aa8.63□□□□□ -1.03
CLK3-220ENST00000567992 CLDN17P56750 224 aa8.63□□□□□ -1.03
CLK3-220ENST00000567992 PUDPQ08623 228 aa8.63□□□□□ -1.03
CLK3-220ENST00000567992 ST3GAL3Q11203 375 aa8.63□□□□□ -1.03
CLK3-220ENST00000567992 FAPQ12884 760 aa8.63□□□□□ -1.03
CLK3-220ENST00000567992 PMS2P3Q13401 168 aa8.63□□□□□ -1.03
CLK3-220ENST00000567992 TAB1Q15750 504 aa8.63□□□□□ -1.03
CLK3-220ENST00000567992 BHLHA15Q7RTS1 189 aaPredicted RBP8.63□□□□□ -1.03
CLK3-220ENST00000567992 TMEM200AQ86VY9 491 aa8.63□□□□□ -1.03
CLK3-220ENST00000567992 TMEM123Q8N131 208 aa8.63□□□□□ -1.03
CLK3-220ENST00000567992 ARHGAP24Q8N264 748 aa8.63□□□□□ -1.03
CLK3-220ENST00000567992 C10orf53Q8N6V4 93 aa8.63□□□□□ -1.03
CLK3-220ENST00000567992 PIK3C3Q8NEB9 887 aa8.63□□□□□ -1.03
CLK3-220ENST00000567992 STEAP2Q8NFT2 490 aa8.63□□□□□ -1.03
CLK3-220ENST00000567992 OR5J2Q8NH18 312 aa8.63□□□□□ -1.03
CLK3-220ENST00000567992 LIPHQ8WWY8 451 aa8.63□□□□□ -1.03
CLK3-220ENST00000567992 NRGNQ92686 78 aa8.63□□□□□ -1.03
CLK3-220ENST00000567992 ZC3HAV1LQ96H79 300 aaKnown RBP8.63□□□□□ -1.03
CLK3-220ENST00000567992 HS3ST6Q96QI5 342 aa8.63□□□□□ -1.03
CLK3-220ENST00000567992 ASPNQ9BXN1 380 aa8.63□□□□□ -1.03
CLK3-220ENST00000567992 HDHD5Q9BXW7 423 aa8.63□□□□□ -1.03
CLK3-220ENST00000567992 C1orf21Q9H246 121 aa8.63□□□□□ -1.03
CLK3-220ENST00000567992 CLEC4MQ9H2X3 399 aaPredicted RBP8.63□□□□□ -1.03
CLK3-220ENST00000567992 SLCO5A1Q9H2Y9 848 aa8.63□□□□□ -1.03
CLK3-220ENST00000567992 PARPBPQ9NWS1 579 aa8.63□□□□□ -1.03
CLK3-220ENST00000567992 TAS2R5Q9NYW4 299 aa8.63□□□□□ -1.03
CLK3-220ENST00000567992 NDUFAF4Q9P032 175 aa8.63□□□□□ -1.03
CLK3-220ENST00000567992 RCE1Q9Y256 329 aa8.63□□□□□ -1.03
CLK3-220ENST00000567992 V9GYQ6 96 aa8.63□□□□□ -1.03
CLK3-220ENST00000567992 MYO9AB2RTY4 2548 aa8.63□□□□□ -1.03
CLK3-220ENST00000567992 MAP1AP78559 2803 aaPredicted RBP8.63□□□□□ -1.03
CLK3-220ENST00000567992 CCDC168Q8NDH2 2452 aa8.63□□□□□ -1.03
CLK3-220ENST00000567992 AKAP6Q13023 2319 aa8.63□□□□□ -1.03
CLK3-220ENST00000567992 TCRBV5S2A0A599 114 aa8.62□□□□□ -1.03
CLK3-220ENST00000567992 hCG_2039718K7EN88 272 aa8.62□□□□□ -1.03
CLK3-220ENST00000567992 RAD51DO75771 328 aa8.62□□□□□ -1.03
CLK3-220ENST00000567992 OR7A10O76100 309 aa8.62□□□□□ -1.03
CLK3-220ENST00000567992 NQO1P15559 274 aaKnown RBP8.62□□□□□ -1.03
CLK3-220ENST00000567992 ZNF43P17038 809 aa8.62□□□□□ -1.03
CLK3-220ENST00000567992 FUT1P19526 365 aa8.62□□□□□ -1.03
CLK3-220ENST00000567992 IL32P24001 234 aa8.62□□□□□ -1.03
CLK3-220ENST00000567992 MS4A2Q01362 244 aa8.62□□□□□ -1.03
CLK3-220ENST00000567992 POU3F1Q03052 451 aaPredicted RBP8.62□□□□□ -1.03
CLK3-220ENST00000567992 ZP4Q12836 540 aa8.62□□□□□ -1.03
CLK3-220ENST00000567992 FHL1Q13642 323 aa8.62□□□□□ -1.03
CLK3-220ENST00000567992 TRAM2Q15035 370 aa8.62□□□□□ -1.03
CLK3-220ENST00000567992 GABRA6Q16445 453 aa8.62□□□□□ -1.03
CLK3-220ENST00000567992 PHYHD1Q5SRE7 291 aa8.62□□□□□ -1.03
CLK3-220ENST00000567992 LCN8Q6JVE9 175 aa8.62□□□□□ -1.03
CLK3-220ENST00000567992 NIPAL3Q6P499 406 aa8.62□□□□□ -1.03
CLK3-220ENST00000567992 FKBP9P1Q75LS8 142 aa8.62□□□□□ -1.03
CLK3-220ENST00000567992 PXKQ7Z7A4 578 aa8.62□□□□□ -1.03
CLK3-220ENST00000567992 CDC20BQ86Y33 519 aa8.62□□□□□ -1.03
CLK3-220ENST00000567992 UEVLDQ8IX04 471 aa8.62□□□□□ -1.03
CLK3-220ENST00000567992 NRMQ8IXM6 262 aa8.62□□□□□ -1.03
CLK3-220ENST00000567992 UBE2J2Q8N2K1 259 aa8.62□□□□□ -1.03
CLK3-220ENST00000567992 ACOT11Q8WXI4 607 aaPredicted RBP8.62□□□□□ -1.03
CLK3-220ENST00000567992 SLC7A6OSQ96CW6 309 aaPredicted RBP8.62□□□□□ -1.03
CLK3-220ENST00000567992 SGTBQ96EQ0 304 aa8.62□□□□□ -1.03
CLK3-220ENST00000567992 PYURFQ96I23 114 aa8.62□□□□□ -1.03
CLK3-220ENST00000567992 TXNDC15Q96J42 360 aa8.62□□□□□ -1.03
CLK3-220ENST00000567992 CLPTM1LQ96KA5 538 aa8.62□□□□□ -1.03
CLK3-220ENST00000567992 DHRS1Q96LJ7 313 aa8.62□□□□□ -1.03
CLK3-220ENST00000567992 NSMCE2Q96MF7 247 aa8.62□□□□□ -1.03
CLK3-220ENST00000567992 HS6ST2Q96MM7 605 aa8.62□□□□□ -1.03
CLK3-220ENST00000567992 ALKBH3Q96Q83 286 aaPredicted RBP8.62□□□□□ -1.03
CLK3-220ENST00000567992 OR2M2Q96R28 347 aa8.62□□□□□ -1.03
CLK3-220ENST00000567992 FUZQ9BT04 418 aa8.62□□□□□ -1.03
CLK3-220ENST00000567992 FNDC11Q9BVV2 318 aa8.62□□□□□ -1.03
CLK3-220ENST00000567992 LINC00470Q9BZP3 86 aa8.62□□□□□ -1.03
CLK3-220ENST00000567992 RASSF4Q9H2L5 321 aa8.62□□□□□ -1.03
CLK3-220ENST00000567992 NELFAQ9H3P2 528 aa8.62□□□□□ -1.03
CLK3-220ENST00000567992 PLEKHF2Q9H8W4 249 aa8.62□□□□□ -1.03
CLK3-220ENST00000567992 NMNAT1Q9HAN9 279 aaPredicted RBP8.62□□□□□ -1.03
CLK3-220ENST00000567992 NANSQ9NR45 359 aa8.62□□□□□ -1.03
CLK3-220ENST00000567992 ASB6Q9NWX5 421 aa8.62□□□□□ -1.03
CLK3-220ENST00000567992 MED29Q9NX70 200 aa8.62□□□□□ -1.03
CLK3-220ENST00000567992 ZNF226Q9NYT6 803 aa8.62□□□□□ -1.03
CLK3-220ENST00000567992 TAS2R16Q9NYV7 291 aa8.62□□□□□ -1.03
CLK3-220ENST00000567992 PRPF19Q9UMS4 504 aaKnown RBP8.62□□□□□ -1.03
CLK3-220ENST00000567992 NOX1Q9Y5S8 564 aa8.62□□□□□ -1.03
CLK3-220ENST00000567992 ALPK2Q86TB3 2170 aa8.61□□□□□ -1.03
CLK3-220ENST00000567992 A0A087WUU8 490 aa8.61□□□□□ -1.03
CLK3-220ENST00000567992 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.61□□□□□ -1.03
CLK3-220ENST00000567992 GMNNO75496 209 aa8.61□□□□□ -1.03
CLK3-220ENST00000567992 DIRAS1O95057 198 aa8.61□□□□□ -1.03
CLK3-220ENST00000567992 ADORA3P0DMS8 318 aa8.61□□□□□ -1.03
CLK3-220ENST00000567992 RHCEP18577 417 aa8.61□□□□□ -1.03
CLK3-220ENST00000567992 MAKP20794 623 aa8.61□□□□□ -1.03
CLK3-220ENST00000567992 MPGP29372 298 aa8.61□□□□□ -1.03
CLK3-220ENST00000567992 DNAJA1P31689 397 aaKnown RBP8.61□□□□□ -1.03
CLK3-220ENST00000567992 RPS4XP62701 263 aaKnown RBP8.61□□□□□ -1.03
CLK3-220ENST00000567992 PRKCDQ05655 676 aa8.61□□□□□ -1.03
CLK3-220ENST00000567992 RPL18Q07020 188 aaKnown RBP8.61□□□□□ -1.03
CLK3-220ENST00000567992 FOXD4Q12950 439 aaPredicted RBP8.61□□□□□ -1.03
CLK3-220ENST00000567992 TIMM23BQ5SRD1 257 aa8.61□□□□□ -1.03
CLK3-220ENST00000567992 C9orf135Q5VTT2 229 aa8.61□□□□□ -1.03
CLK3-220ENST00000567992 TBPL2Q6SJ96 375 aa8.61□□□□□ -1.03
CLK3-220ENST00000567992 CYP2R1Q6VVX0 501 aa8.61□□□□□ -1.03
CLK3-220ENST00000567992 MBOAT2Q6ZWT7 520 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms