RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 FBXL14Q8N1E6 418 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 SCAIQ8N9R8 606 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 WDR31Q8NA23 367 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 ADPRHL1Q8NDY3 354 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 OR1K1Q8NGR3 316 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 OR6S1Q8NH40 331 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 ZNF417Q8TAU3 575 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 MAGEE2Q8TD90 523 aaPredicted RBP4.19□□□□□ -1.74
CLK3-219ENST00000567805 RASSF5Q8WWW0 418 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 TAAR8Q969N4 342 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 SLC25A36Q96CQ1 311 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 ADAD1Q96M93 576 aaKnown RBP4.19□□□□□ -1.74
CLK3-219ENST00000567805 HS6ST2Q96MM7 605 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 OXGR1Q96P68 337 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 ALKBH3Q96Q83 286 aaPredicted RBP4.19□□□□□ -1.74
CLK3-219ENST00000567805 ZNF587Q96SQ5 575 aaPredicted RBP4.19□□□□□ -1.74
CLK3-219ENST00000567805 EPYCQ99645 322 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 CGREF1Q99674 301 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 ARHGDIGQ99819 225 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 DHRS9Q9BPW9 319 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 TMEM43Q9BTV4 400 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 KAT8Q9H7Z6 458 aaKnown RBP4.19□□□□□ -1.74
CLK3-219ENST00000567805 FKRPQ9H9S5 495 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 TMEM27Q9HBJ8 222 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 BARX1Q9HBU1 254 aaPredicted RBP4.19□□□□□ -1.74
CLK3-219ENST00000567805 MOV10Q9HCE1 1003 aaKnown RBP4.19□□□□□ -1.74
CLK3-219ENST00000567805 OBP2BQ9NPH6 170 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 CBLN4Q9NTU7 201 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 KLHL14Q9P2G3 628 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 B3GAT1Q9P2W7 334 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 RCE1Q9Y256 329 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 CORINQ9Y5Q5 1042 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 YLPM1P49750 1951 aaKnown RBP4.19□□□□□ -1.74
CLK3-219ENST00000567805 CHD3Q12873 2000 aaKnown RBP4.19□□□□□ -1.74
CLK3-219ENST00000567805 PLCE1Q9P212 2302 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 USF3Q68DE3 2245 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 IGKV1D-42A0A075B6H8 117 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 ARPC4-TTLL3A0A0A6YYG9 625 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 IGHV1-18A0A0C4DH31 117 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 BBIP1A8MTZ0 92 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 E7EQL1 145 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 TRAF3IP2O43734 574 aaPredicted RBP4.18□□□□□ -1.74
CLK3-219ENST00000567805 CHP2O43745 196 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 TPST2O60704 377 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 SLC43A1O75387 559 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 UPK3AO75631 287 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 ZNF432O94892 652 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 LY6G6DO95868 133 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 MT-ATP6P00846 226 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 IGHV4-39P01824 125 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 BGLAPP02818 100 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 VIMP08670 466 aaKnown RBP4.18□□□□□ -1.74
CLK3-219ENST00000567805 BMP4P12644 408 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 NQO1P15559 274 aaKnown RBP4.18□□□□□ -1.74
CLK3-219ENST00000567805 GRPRP30550 384 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 PCGF2P35227 344 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 ACVR1BP36896 505 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 FABP6P51161 128 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 CDH12P55289 794 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 CLDN17P56750 224 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 UBE2NP61088 152 aaKnown RBP4.18□□□□□ -1.74
CLK3-219ENST00000567805 IL1RL1Q01638 556 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 ROR2Q01974 943 aaKnown RBP4.18□□□□□ -1.74
CLK3-219ENST00000567805 LGALS3BPQ08380 585 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 PUDPQ08623 228 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 C1DQ13901 141 aaKnown RBP4.18□□□□□ -1.74
CLK3-219ENST00000567805 NFYCQ13952 458 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 CYLC2Q14093 348 aaPredicted RBP4.18□□□□□ -1.74
CLK3-219ENST00000567805 VEZF1Q14119 521 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 SELPLGQ14242 412 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 MAPRE2Q15555 327 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 OR1Q1Q15612 314 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 DUSP7Q16829 419 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 VMACQ2NL98 169 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 TRMT5Q32P41 509 aaKnown RBP4.18□□□□□ -1.74
CLK3-219ENST00000567805 TBRG1Q3YBR2 411 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 HIKESHIQ53FT3 197 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 COQ5Q5HYK3 327 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 ZNF544Q6NX49 715 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 ANKRD16Q6P6B7 361 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 B3GLCTQ6Y288 498 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 DNM1P46Q6ZS02 220 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 Q71RC1 249 aaPredicted RBP4.18□□□□□ -1.74
CLK3-219ENST00000567805 LINGO2Q7L985 606 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 PXKQ7Z7A4 578 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 PATL1Q86TB9 770 aaKnown RBP4.18□□□□□ -1.74
CLK3-219ENST00000567805 UEVLDQ8IX04 471 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 KDM8Q8N371 416 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 MUC15Q8N387 334 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 GPR137CQ8N3F9 429 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 FAM169BQ8N8A8 192 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 SMYD1Q8NB12 490 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 PIK3C3Q8NEB9 887 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 OR6T1Q8NGN1 323 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 OR10A6Q8NH74 314 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 RNF217Q8TC41 542 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 BCL2L2Q92843 193 aaPredicted RBP4.18□□□□□ -1.74
CLK3-219ENST00000567805 SLC41A3Q96GZ6 507 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 MOGAT1Q96PD6 335 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 SLC38A2Q96QD8 506 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms