RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 USP22Q9UPT9 525 aa12.79□□□□□ -0.36
FANCA-220ENST00000566409 RCE1Q9Y256 329 aa12.79□□□□□ -0.36
FANCA-220ENST00000566409 YLPM1P49750 1951 aaKnown RBP12.79□□□□□ -0.36
FANCA-220ENST00000566409 A0A096LPE4 126 aa12.78□□□□□ -0.36
FANCA-220ENST00000566409 IGHV1-18A0A0C4DH31 117 aa12.78□□□□□ -0.36
FANCA-220ENST00000566409 A0A1W2PPZ6 126 aa12.78□□□□□ -0.36
FANCA-220ENST00000566409 OR6C65A6NJZ3 312 aa12.78□□□□□ -0.36
FANCA-220ENST00000566409 FAM171A2A8MVW0 826 aa12.78□□□□□ -0.36
FANCA-220ENST00000566409 ATP6V1G2-DDX39BF2Z307 99 aa12.78□□□□□ -0.36
FANCA-220ENST00000566409 RPL36A-HNRNPH2H7BZ11 118 aa12.78□□□□□ -0.36
FANCA-220ENST00000566409 FMO6PO60774 539 aa12.78□□□□□ -0.36
FANCA-220ENST00000566409 C8BP07358 591 aa12.78□□□□□ -0.36
FANCA-220ENST00000566409 GTF2E2P29084 291 aaKnown RBP12.78□□□□□ -0.36
FANCA-220ENST00000566409 NCALDP61601 193 aa12.78□□□□□ -0.36
FANCA-220ENST00000566409 TUBA1BP68363 451 aa12.78□□□□□ -0.36
FANCA-220ENST00000566409 TUBA4AP68366 448 aa12.78□□□□□ -0.36
FANCA-220ENST00000566409 ROR2Q01974 943 aaKnown RBP12.78□□□□□ -0.36
FANCA-220ENST00000566409 KLF10Q13118 480 aa12.78□□□□□ -0.36
FANCA-220ENST00000566409 TRMT5Q32P41 509 aaKnown RBP12.78□□□□□ -0.36
FANCA-220ENST00000566409 SWT1Q5T5J6 900 aaKnown RBP12.78□□□□□ -0.36
FANCA-220ENST00000566409 C1QTNF12Q5T7M4 302 aa12.78□□□□□ -0.36
FANCA-220ENST00000566409 AGAP6Q5VW22 663 aa12.78□□□□□ -0.36
FANCA-220ENST00000566409 TUBA1AQ71U36 451 aa12.78□□□□□ -0.36
FANCA-220ENST00000566409 ABHD12BQ7Z5M8 362 aaPredicted RBP12.78□□□□□ -0.36
FANCA-220ENST00000566409 RANBP3LQ86VV4 465 aaPredicted RBP12.78□□□□□ -0.36
FANCA-220ENST00000566409 CALHM3Q86XJ0 350 aa12.78□□□□□ -0.36
FANCA-220ENST00000566409 MUC15Q8N387 334 aa12.78□□□□□ -0.36
FANCA-220ENST00000566409 MAPK1IP1LQ8NDC0 245 aa12.78□□□□□ -0.36
FANCA-220ENST00000566409 ADPRHL1Q8NDY3 354 aa12.78□□□□□ -0.36
FANCA-220ENST00000566409 OR6S1Q8NH40 331 aa12.78□□□□□ -0.36
FANCA-220ENST00000566409 RNF217Q8TC41 542 aa12.78□□□□□ -0.36
FANCA-220ENST00000566409 LRRC58Q96CX6 371 aa12.78□□□□□ -0.36
FANCA-220ENST00000566409 TXNDC15Q96J42 360 aa12.78□□□□□ -0.36
FANCA-220ENST00000566409 OR2M2Q96R28 347 aa12.78□□□□□ -0.36
FANCA-220ENST00000566409 TMEM43Q9BTV4 400 aa12.78□□□□□ -0.36
FANCA-220ENST00000566409 ALG2Q9H553 416 aa12.78□□□□□ -0.36
FANCA-220ENST00000566409 EVA1AQ9H8M9 152 aa12.78□□□□□ -0.36
FANCA-220ENST00000566409 GPR35Q9HC97 309 aa12.78□□□□□ -0.36
FANCA-220ENST00000566409 SLC13A4Q9UKG4 626 aa12.78□□□□□ -0.36
FANCA-220ENST00000566409 POU2F3Q9UKI9 436 aa12.78□□□□□ -0.36
FANCA-220ENST00000566409 MOKQ9UQ07 419 aa12.78□□□□□ -0.36
FANCA-220ENST00000566409 ZNF503-AS2A6NEH8 195 aa12.77□□□□□ -0.37
FANCA-220ENST00000566409 CPSF4LA6NMK7 179 aaKnown RBP12.77□□□□□ -0.37
FANCA-220ENST00000566409 RNF223E7ERA6 249 aa12.77□□□□□ -0.37
FANCA-220ENST00000566409 WNT11O96014 354 aa12.77□□□□□ -0.37
FANCA-220ENST00000566409 ARFIP2P53365 341 aa12.77□□□□□ -0.37
FANCA-220ENST00000566409 ARF1P84077 181 aaKnown RBP12.77□□□□□ -0.37
FANCA-220ENST00000566409 GUCY1A3Q02108 690 aa12.77□□□□□ -0.37
FANCA-220ENST00000566409 C1DQ13901 141 aaKnown RBP12.77□□□□□ -0.37
FANCA-220ENST00000566409 ETFDHQ16134 617 aa12.77□□□□□ -0.37
FANCA-220ENST00000566409 VMACQ2NL98 169 aa12.77□□□□□ -0.37
FANCA-220ENST00000566409 ENTPD8Q5MY95 495 aa12.77□□□□□ -0.37
FANCA-220ENST00000566409 ANKRD16Q6P6B7 361 aa12.77□□□□□ -0.37
FANCA-220ENST00000566409 ZNF613Q6PF04 617 aa12.77□□□□□ -0.37
FANCA-220ENST00000566409 CCDC80Q76M96 950 aa12.77□□□□□ -0.37
FANCA-220ENST00000566409 PATL1Q86TB9 770 aaKnown RBP12.77□□□□□ -0.37
FANCA-220ENST00000566409 VANGL1Q8TAA9 524 aaPredicted RBP12.77□□□□□ -0.37
FANCA-220ENST00000566409 MAGEE2Q8TD90 523 aaPredicted RBP12.77□□□□□ -0.37
FANCA-220ENST00000566409 HTRA1Q92743 480 aa12.77□□□□□ -0.37
FANCA-220ENST00000566409 EMC6Q9BV81 110 aa12.77□□□□□ -0.37
FANCA-220ENST00000566409 CACNG6Q9BXT2 260 aa12.77□□□□□ -0.37
FANCA-220ENST00000566409 SEC61A2Q9H9S3 476 aa12.77□□□□□ -0.37
FANCA-220ENST00000566409 OBP2BQ9NPH6 170 aa12.77□□□□□ -0.37
FANCA-220ENST00000566409 CBLN4Q9NTU7 201 aa12.77□□□□□ -0.37
FANCA-220ENST00000566409 MRPL39Q9NYK5 338 aaKnown RBP12.77□□□□□ -0.37
FANCA-220ENST00000566409 ATP23Q9Y6H3 246 aa12.77□□□□□ -0.37
FANCA-220ENST00000566409 ATRQ13535 2644 aa12.76□□□□□ -0.37
FANCA-220ENST00000566409 ARPC4-TTLL3A0A0A6YYG9 625 aa12.76□□□□□ -0.37
FANCA-220ENST00000566409 PLPP3O14495 311 aa12.76□□□□□ -0.37
FANCA-220ENST00000566409 CHP2O43745 196 aa12.76□□□□□ -0.37
FANCA-220ENST00000566409 SLC43A1O75387 559 aa12.76□□□□□ -0.37
FANCA-220ENST00000566409 TROVE2P10155 538 aaKnown RBP eCLIP12.76□□□□□ -0.37
FANCA-220ENST00000566409 FABP6P51161 128 aa12.76□□□□□ -0.37
FANCA-220ENST00000566409 CYLC2Q14093 348 aaPredicted RBP12.76□□□□□ -0.37
FANCA-220ENST00000566409 VEZF1Q14119 521 aa12.76□□□□□ -0.37
FANCA-220ENST00000566409 MFSD13AQ14CX5 517 aa12.76□□□□□ -0.37
FANCA-220ENST00000566409 MST1LQ2TV78 715 aa12.76□□□□□ -0.37
FANCA-220ENST00000566409 CEACAM16Q2WEN9 425 aa12.76□□□□□ -0.37
FANCA-220ENST00000566409 COQ5Q5HYK3 327 aa12.76□□□□□ -0.37
FANCA-220ENST00000566409 REP15Q6BDI9 236 aa12.76□□□□□ -0.37
FANCA-220ENST00000566409 HMBOX1Q6NT76 420 aa12.76□□□□□ -0.37
FANCA-220ENST00000566409 ZNF544Q6NX49 715 aa12.76□□□□□ -0.37
FANCA-220ENST00000566409 KLHL24Q6TFL4 600 aa12.76□□□□□ -0.37
FANCA-220ENST00000566409 MYPOPQ86VE0 399 aaPredicted RBP12.76□□□□□ -0.37
FANCA-220ENST00000566409 SLC30A8Q8IWU4 369 aa12.76□□□□□ -0.37
FANCA-220ENST00000566409 UEVLDQ8IX04 471 aa12.76□□□□□ -0.37
FANCA-220ENST00000566409 C20orf196Q8IYI0 205 aa12.76□□□□□ -0.37
FANCA-220ENST00000566409 DEPDC4Q8N2C3 294 aa12.76□□□□□ -0.37
FANCA-220ENST00000566409 SCAIQ8N9R8 606 aa12.76□□□□□ -0.37
FANCA-220ENST00000566409 ANKK1Q8NFD2 765 aa12.76□□□□□ -0.37
FANCA-220ENST00000566409 ADAMTS16Q8TE57 1224 aa12.76□□□□□ -0.37
FANCA-220ENST00000566409 ZNF583Q96ND8 569 aa12.76□□□□□ -0.37
FANCA-220ENST00000566409 SLC38A2Q96QD8 506 aa12.76□□□□□ -0.37
FANCA-220ENST00000566409 EPYCQ99645 322 aa12.76□□□□□ -0.37
FANCA-220ENST00000566409 REG4Q9BYZ8 158 aa12.76□□□□□ -0.37
FANCA-220ENST00000566409 PCDHAC1Q9H158 963 aa12.76□□□□□ -0.37
FANCA-220ENST00000566409 CRLF2Q9HC73 371 aa12.76□□□□□ -0.37
FANCA-220ENST00000566409 MED29Q9NX70 200 aa12.76□□□□□ -0.37
FANCA-220ENST00000566409 SELENONQ9NZV5 590 aa12.76□□□□□ -0.37
FANCA-220ENST00000566409 CRNNQ9UBG3 495 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms