RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 PDSS1Q5T2R2 415 aa16.8■□□□□ 0.28
COMMD4-213ENST00000565834 HBMQ6B0K9 141 aa16.8■□□□□ 0.28
COMMD4-213ENST00000565834 BCDIN3DQ7Z5W3 292 aaKnown RBP16.8■□□□□ 0.28
COMMD4-213ENST00000565834 KDM8Q8N371 416 aa16.8■□□□□ 0.28
COMMD4-213ENST00000565834 ANKK1Q8NFD2 765 aa16.8■□□□□ 0.28
COMMD4-213ENST00000565834 OR52E2Q8NGJ4 325 aa16.8■□□□□ 0.28
COMMD4-213ENST00000565834 OR4K13Q8NH42 304 aa16.8■□□□□ 0.28
COMMD4-213ENST00000565834 OR2V1Q8NHB1 315 aa16.8■□□□□ 0.28
COMMD4-213ENST00000565834 NEIL3Q8TAT5 605 aa16.8■□□□□ 0.28
COMMD4-213ENST00000565834 ABTB1Q969K4 478 aaPredicted RBP16.8■□□□□ 0.28
COMMD4-213ENST00000565834 RASD2Q96D21 266 aa16.8■□□□□ 0.28
COMMD4-213ENST00000565834 ZHX1-C8orf76Q96EF9 292 aa16.8■□□□□ 0.28
COMMD4-213ENST00000565834 TSPAN32Q96QS1 320 aa16.8■□□□□ 0.28
COMMD4-213ENST00000565834 EXO5Q9H790 373 aa16.8■□□□□ 0.28
COMMD4-213ENST00000565834 HINT3Q9NQE9 182 aaKnown RBP16.8■□□□□ 0.28
COMMD4-213ENST00000565834 PLCXD1Q9NUJ7 323 aa16.8■□□□□ 0.28
COMMD4-213ENST00000565834 B3GNT3Q9Y2A9 372 aa16.8■□□□□ 0.28
COMMD4-213ENST00000565834 TPRKBQ9Y3C4 175 aa16.8■□□□□ 0.28
COMMD4-213ENST00000565834 LIPGQ9Y5X9 500 aa16.8■□□□□ 0.28
COMMD4-213ENST00000565834 TRGV5A0A0B4J1U4 118 aa16.79■□□□□ 0.28
COMMD4-213ENST00000565834 TMEM8BA6NDV4 472 aa16.79■□□□□ 0.28
COMMD4-213ENST00000565834 AQP7P3A6NL99 342 aa16.79■□□□□ 0.28
COMMD4-213ENST00000565834 TXNDC12O95881 172 aa16.79■□□□□ 0.28
COMMD4-213ENST00000565834 ACTL6AO96019 429 aa16.79■□□□□ 0.28
COMMD4-213ENST00000565834 PAICSP22234 425 aaKnown RBP16.79■□□□□ 0.28
COMMD4-213ENST00000565834 EEF1B2P24534 225 aaKnown RBP16.79■□□□□ 0.28
COMMD4-213ENST00000565834 LHX2P50458 406 aa16.79■□□□□ 0.28
COMMD4-213ENST00000565834 SUCLG1P53597 346 aaKnown RBP16.79■□□□□ 0.28
COMMD4-213ENST00000565834 GABARAPL2P60520 117 aa16.79■□□□□ 0.28
COMMD4-213ENST00000565834 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.79■□□□□ 0.28
COMMD4-213ENST00000565834 ZNF239Q16600 458 aaKnown RBP16.79■□□□□ 0.28
COMMD4-213ENST00000565834 EMC4Q5J8M3 183 aa16.79■□□□□ 0.28
COMMD4-213ENST00000565834 ZNF362Q5T0B9 420 aaPredicted RBP16.79■□□□□ 0.28
COMMD4-213ENST00000565834 ASB18Q6ZVZ8 466 aa16.79■□□□□ 0.28
COMMD4-213ENST00000565834 CXXC5Q7LFL8 322 aaKnown RBP16.79■□□□□ 0.28
COMMD4-213ENST00000565834 CPOQ8IVL8 374 aa16.79■□□□□ 0.28
COMMD4-213ENST00000565834 OTULINQ96BN8 352 aa16.79■□□□□ 0.28
COMMD4-213ENST00000565834 ADGRG7Q96K78 797 aa16.79■□□□□ 0.28
COMMD4-213ENST00000565834 ZNF582Q96NG8 517 aaPredicted RBP16.79■□□□□ 0.28
COMMD4-213ENST00000565834 NAA11Q9BSU3 229 aaPredicted RBP16.79■□□□□ 0.28
COMMD4-213ENST00000565834 TXNIPQ9H3M7 391 aa16.79■□□□□ 0.28
COMMD4-213ENST00000565834 FANCFQ9NPI8 374 aa16.79■□□□□ 0.28
COMMD4-213ENST00000565834 FAM183AA6NL82 134 aa16.78■□□□□ 0.28
COMMD4-213ENST00000565834 SNTNA6NMZ2 147 aa16.78■□□□□ 0.28
COMMD4-213ENST00000565834 KDM4EB2RXH2 506 aaPredicted RBP16.78■□□□□ 0.28
COMMD4-213ENST00000565834 PRR23D1E9PI22 279 aaPredicted RBP16.78■□□□□ 0.28
COMMD4-213ENST00000565834 IGHMP01871 453 aa16.78■□□□□ 0.28
COMMD4-213ENST00000565834 PRR23D2P0DMB1 279 aaPredicted RBP16.78■□□□□ 0.28
COMMD4-213ENST00000565834 EIF1AXP47813 144 aaKnown RBP16.78■□□□□ 0.28
COMMD4-213ENST00000565834 P2RY4P51582 365 aa16.78■□□□□ 0.28
COMMD4-213ENST00000565834 CARD18P57730 90 aa16.78■□□□□ 0.28
COMMD4-213ENST00000565834 RAC3P60763 192 aa16.78■□□□□ 0.28
COMMD4-213ENST00000565834 RPL27P61353 136 aaKnown RBP16.78■□□□□ 0.28
COMMD4-213ENST00000565834 H3F3AP84243 136 aa16.78■□□□□ 0.28
COMMD4-213ENST00000565834 POU3F1Q03052 451 aaPredicted RBP16.78■□□□□ 0.28
COMMD4-213ENST00000565834 ITGADQ13349 1161 aa16.78■□□□□ 0.28
COMMD4-213ENST00000565834 KRR1Q13601 381 aaKnown RBP16.78■□□□□ 0.28
COMMD4-213ENST00000565834 CRMP1Q14194 572 aa16.78■□□□□ 0.28
COMMD4-213ENST00000565834 ACKR1Q16570 336 aa16.78■□□□□ 0.28
COMMD4-213ENST00000565834 TMEM225Q6GV28 225 aa16.78■□□□□ 0.28
COMMD4-213ENST00000565834 PLBD1Q6P4A8 553 aa16.78■□□□□ 0.28
COMMD4-213ENST00000565834 PXKQ7Z7A4 578 aa16.78■□□□□ 0.28
COMMD4-213ENST00000565834 JAZF1Q86VZ6 243 aa16.78■□□□□ 0.28
COMMD4-213ENST00000565834 CYB561A3Q8NBI2 242 aa16.78■□□□□ 0.28
COMMD4-213ENST00000565834 SLC37A3Q8NCC5 494 aa16.78■□□□□ 0.28
COMMD4-213ENST00000565834 ZNF540Q8NDQ6 660 aa16.78■□□□□ 0.28
COMMD4-213ENST00000565834 SDR9C7Q8NEX9 313 aa16.78■□□□□ 0.28
COMMD4-213ENST00000565834 TSPAN14Q8NG11 270 aa16.78■□□□□ 0.28
COMMD4-213ENST00000565834 SRXN1Q9BYN0 137 aa16.78■□□□□ 0.28
COMMD4-213ENST00000565834 AMBNQ9NP70 447 aa16.78■□□□□ 0.28
COMMD4-213ENST00000565834 SCOCQ9UIL1 159 aa16.78■□□□□ 0.28
COMMD4-213ENST00000565834 ZNF346Q9UL40 294 aaKnown RBP16.78■□□□□ 0.28
COMMD4-213ENST00000565834 TRIM64A6NGJ6 449 aa16.78■□□□□ 0.28
COMMD4-213ENST00000565834 ZNF814B7Z6K7 855 aa16.78■□□□□ 0.28
COMMD4-213ENST00000565834 PTGES3LE9PB15 166 aa16.78■□□□□ 0.28
COMMD4-213ENST00000565834 PRODHO43272 600 aa16.78■□□□□ 0.28
COMMD4-213ENST00000565834 HLA-DOBP13765 273 aa16.78■□□□□ 0.28
COMMD4-213ENST00000565834 ZNF708P17019 499 aa16.78■□□□□ 0.28
COMMD4-213ENST00000565834 ACVR2AP27037 513 aa16.78■□□□□ 0.28
COMMD4-213ENST00000565834 CLDN18P56856 261 aa16.78■□□□□ 0.28
COMMD4-213ENST00000565834 HSF1Q00613 529 aa16.78■□□□□ 0.28
COMMD4-213ENST00000565834 INAQ16352 499 aa16.78■□□□□ 0.28
COMMD4-213ENST00000565834 AADACL4Q5VUY2 407 aa16.78■□□□□ 0.28
COMMD4-213ENST00000565834 NXNL2Q5VZ03 156 aa16.78■□□□□ 0.28
COMMD4-213ENST00000565834 RPUSD3Q6P087 351 aaKnown RBP16.78■□□□□ 0.28
COMMD4-213ENST00000565834 MEIOBQ8N635 442 aa16.78■□□□□ 0.28
COMMD4-213ENST00000565834 OR10D3Q8NH80 312 aa16.78■□□□□ 0.28
COMMD4-213ENST00000565834 TSPAN10Q9H1Z9 355 aaPredicted RBP16.78■□□□□ 0.28
COMMD4-213ENST00000565834 TIGARQ9NQ88 270 aa16.78■□□□□ 0.28
COMMD4-213ENST00000565834 H2AFY2Q9P0M6 372 aaPredicted RBP16.78■□□□□ 0.28
COMMD4-213ENST00000565834 B3GAT1Q9P2W7 334 aa16.78■□□□□ 0.28
COMMD4-213ENST00000565834 NOX1Q9Y5S8 564 aa16.78■□□□□ 0.28
COMMD4-213ENST00000565834 ALPK2Q86TB3 2170 aa16.77■□□□□ 0.28
COMMD4-213ENST00000565834 NPIPB13A6NJU9 1138 aa16.77■□□□□ 0.28
COMMD4-213ENST00000565834 NPIPB4C9JG80 1138 aa16.77■□□□□ 0.28
COMMD4-213ENST00000565834 NPIPA5E9PKD4 350 aa16.77■□□□□ 0.28
COMMD4-213ENST00000565834 M0R3G1 203 aa16.77■□□□□ 0.28
COMMD4-213ENST00000565834 CXCL13O43927 109 aa16.77■□□□□ 0.28
COMMD4-213ENST00000565834 IGHG3P01860 377 aa16.77■□□□□ 0.28
COMMD4-213ENST00000565834 DAP3P51398 398 aaKnown RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms