RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 NFATC3Q12968 1075 aa5.62□□□□□ -1.51
CHD9-217ENST00000565832 EFR3AQ14156 821 aa5.62□□□□□ -1.51
CHD9-217ENST00000565832 SSPNQ14714 243 aa5.62□□□□□ -1.51
CHD9-217ENST00000565832 SPHARQ15513 63 aa5.62□□□□□ -1.51
CHD9-217ENST00000565832 SSX1Q16384 188 aa5.62□□□□□ -1.51
CHD9-217ENST00000565832 NTRK2Q16620 822 aa5.62□□□□□ -1.51
CHD9-217ENST00000565832 GLYR1Q49A26 553 aaPredicted RBP5.62□□□□□ -1.51
CHD9-217ENST00000565832 LIPKQ5VXJ0 399 aa5.62□□□□□ -1.51
CHD9-217ENST00000565832 NXNL2Q5VZ03 156 aa5.62□□□□□ -1.51
CHD9-217ENST00000565832 SLC6A19Q695T7 634 aa5.62□□□□□ -1.51
CHD9-217ENST00000565832 MEPCEQ7L2J0 689 aaKnown RBP5.62□□□□□ -1.51
CHD9-217ENST00000565832 P2RY8Q86VZ1 359 aa5.62□□□□□ -1.51
CHD9-217ENST00000565832 ANKRD13BQ86YJ7 626 aa5.62□□□□□ -1.51
CHD9-217ENST00000565832 ERI1Q8IV48 349 aaKnown RBP5.62□□□□□ -1.51
CHD9-217ENST00000565832 WDFY1Q8IWB7 410 aa5.62□□□□□ -1.51
CHD9-217ENST00000565832 RFLNBQ8N5W9 214 aa5.62□□□□□ -1.51
CHD9-217ENST00000565832 FAM98AQ8NCA5 519 aaKnown RBP5.62□□□□□ -1.51
CHD9-217ENST00000565832 ZNF420Q8TAQ5 688 aaPredicted RBP5.62□□□□□ -1.51
CHD9-217ENST00000565832 KISS1RQ969F8 398 aaPredicted RBP5.62□□□□□ -1.51
CHD9-217ENST00000565832 JSRP1Q96MG2 331 aaPredicted RBP5.62□□□□□ -1.51
CHD9-217ENST00000565832 FOXN4Q96NZ1 517 aa5.62□□□□□ -1.51
CHD9-217ENST00000565832 OPALINQ96PE5 141 aa5.62□□□□□ -1.51
CHD9-217ENST00000565832 SECISBP2Q96T21 854 aaKnown RBP5.62□□□□□ -1.51
CHD9-217ENST00000565832 MYCBPQ99417 103 aaPredicted RBP5.62□□□□□ -1.51
CHD9-217ENST00000565832 TMEM43Q9BTV4 400 aa5.62□□□□□ -1.51
CHD9-217ENST00000565832 DDA1Q9BW61 102 aa5.62□□□□□ -1.51
CHD9-217ENST00000565832 NRIP3Q9NQ35 241 aa5.62□□□□□ -1.51
CHD9-217ENST00000565832 ASB6Q9NWX5 421 aa5.62□□□□□ -1.51
CHD9-217ENST00000565832 TAS2R10Q9NYW0 307 aa5.62□□□□□ -1.51
CHD9-217ENST00000565832 PTTG2Q9NZH5 202 aa5.62□□□□□ -1.51
CHD9-217ENST00000565832 ERGIC3Q9Y282 383 aa5.62□□□□□ -1.51
CHD9-217ENST00000565832 YARS2Q9Y2Z4 477 aaKnown RBP5.62□□□□□ -1.51
CHD9-217ENST00000565832 A0A0G2JMM0 328 aa5.61□□□□□ -1.51
CHD9-217ENST00000565832 A0A1W2PPB8 328 aa5.61□□□□□ -1.51
CHD9-217ENST00000565832 A0A1W2PRS3 328 aa5.61□□□□□ -1.51
CHD9-217ENST00000565832 KIR3DP1A8MWS1 328 aa5.61□□□□□ -1.51
CHD9-217ENST00000565832 PRR23D1E9PI22 279 aaPredicted RBP5.61□□□□□ -1.51
CHD9-217ENST00000565832 AHCYL1O43865 530 aa5.61□□□□□ -1.51
CHD9-217ENST00000565832 NPIPB7O75200 414 aa5.61□□□□□ -1.51
CHD9-217ENST00000565832 RAB36O95755 333 aa5.61□□□□□ -1.51
CHD9-217ENST00000565832 PRR23D2P0DMB1 279 aaPredicted RBP5.61□□□□□ -1.51
CHD9-217ENST00000565832 PIPP12273 146 aaPredicted RBP5.61□□□□□ -1.51
CHD9-217ENST00000565832 HTR1FP30939 366 aa5.61□□□□□ -1.51
CHD9-217ENST00000565832 LCN1P31025 176 aa5.61□□□□□ -1.51
CHD9-217ENST00000565832 SLC6A6P31641 620 aa5.61□□□□□ -1.51
CHD9-217ENST00000565832 POLR2HP52434 150 aaKnown RBP5.61□□□□□ -1.51
CHD9-217ENST00000565832 RPS4XP62701 263 aaKnown RBP5.61□□□□□ -1.51
CHD9-217ENST00000565832 RAB40BQ12829 278 aa5.61□□□□□ -1.51
CHD9-217ENST00000565832 FOXF1Q12946 379 aa5.61□□□□□ -1.51
CHD9-217ENST00000565832 ATP1A4Q13733 1029 aa5.61□□□□□ -1.51
CHD9-217ENST00000565832 INSL4Q14641 139 aa5.61□□□□□ -1.51
CHD9-217ENST00000565832 EXT1Q16394 746 aa5.61□□□□□ -1.51
CHD9-217ENST00000565832 KLHL22Q53GT1 634 aa5.61□□□□□ -1.51
CHD9-217ENST00000565832 ALG10Q5BKT4 473 aa5.61□□□□□ -1.51
CHD9-217ENST00000565832 C1orf140Q5VVS0 124 aa5.61□□□□□ -1.51
CHD9-217ENST00000565832 SPINK14Q6IE38 97 aa5.61□□□□□ -1.51
CHD9-217ENST00000565832 NIPAL3Q6P499 406 aa5.61□□□□□ -1.51
CHD9-217ENST00000565832 FDX2Q6P4F2 183 aa5.61□□□□□ -1.51
CHD9-217ENST00000565832 VHLLQ6RSH7 139 aa5.61□□□□□ -1.51
CHD9-217ENST00000565832 MRPL41Q8IXM3 137 aaKnown RBP5.61□□□□□ -1.51
CHD9-217ENST00000565832 CYP4Z2PQ8N1L4 340 aa5.61□□□□□ -1.51
CHD9-217ENST00000565832 TMEM156Q8N614 296 aa5.61□□□□□ -1.51
CHD9-217ENST00000565832 TMEM99Q8N816 258 aa5.61□□□□□ -1.51
CHD9-217ENST00000565832 LRRC75AQ8NAA5 344 aa5.61□□□□□ -1.51
CHD9-217ENST00000565832 NPEPL1Q8NDH3 523 aa5.61□□□□□ -1.51
CHD9-217ENST00000565832 NLGN4YQ8NFZ3 816 aaPredicted RBP5.61□□□□□ -1.51
CHD9-217ENST00000565832 POC1BQ8TC44 478 aa5.61□□□□□ -1.51
CHD9-217ENST00000565832 M1APQ8TC57 530 aa5.61□□□□□ -1.51
CHD9-217ENST00000565832 SLC22A8Q8TCC7 542 aa5.61□□□□□ -1.51
CHD9-217ENST00000565832 RAB2BQ8WUD1 216 aa5.61□□□□□ -1.51
CHD9-217ENST00000565832 ASB15Q8WXK1 588 aa5.61□□□□□ -1.51
CHD9-217ENST00000565832 PSMF1Q92530 271 aa5.61□□□□□ -1.51
CHD9-217ENST00000565832 ZMYND19Q96E35 227 aaPredicted RBP5.61□□□□□ -1.51
CHD9-217ENST00000565832 TRMT61AQ96FX7 289 aaKnown RBP5.61□□□□□ -1.51
CHD9-217ENST00000565832 DDOQ99489 341 aa5.61□□□□□ -1.51
CHD9-217ENST00000565832 CHCHD6Q9BRQ6 235 aa5.61□□□□□ -1.51
CHD9-217ENST00000565832 ZPBPQ9BS86 351 aa5.61□□□□□ -1.51
CHD9-217ENST00000565832 TEX12Q9BXU0 123 aa5.61□□□□□ -1.51
CHD9-217ENST00000565832 EVA1AQ9H8M9 152 aa5.61□□□□□ -1.51
CHD9-217ENST00000565832 MED17Q9NVC6 651 aa5.61□□□□□ -1.51
CHD9-217ENST00000565832 PPP4R1LQ9P1A2 415 aa5.61□□□□□ -1.51
CHD9-217ENST00000565832 DIMT1Q9UNQ2 313 aaKnown RBP5.61□□□□□ -1.51
CHD9-217ENST00000565832 WIF1Q9Y5W5 379 aa5.61□□□□□ -1.51
CHD9-217ENST00000565832 SVILO95425 2214 aa5.61□□□□□ -1.51
CHD9-217ENST00000565832 RELNP78509 3460 aa5.61□□□□□ -1.51
CHD9-217ENST00000565832 APC2O95996 2303 aa5.61□□□□□ -1.51
CHD9-217ENST00000565832 ACACAQ13085 2346 aa5.61□□□□□ -1.51
CHD9-217ENST00000565832 PTPRBP23467 1997 aa5.6□□□□□ -1.51
CHD9-217ENST00000565832 CCDC182A6NF36 153 aa5.6□□□□□ -1.51
CHD9-217ENST00000565832 ANKUB1A6NFN9 424 aa5.6□□□□□ -1.51
CHD9-217ENST00000565832 TRIM64BA6NI03 449 aa5.6□□□□□ -1.51
CHD9-217ENST00000565832 RIIAD1A6NNX1 92 aa5.6□□□□□ -1.51
CHD9-217ENST00000565832 J3QRE1 110 aa5.6□□□□□ -1.51
CHD9-217ENST00000565832 ZNF701M0R085 212 aaPredicted RBP5.6□□□□□ -1.51
CHD9-217ENST00000565832 DVL2O14641 736 aa5.6□□□□□ -1.51
CHD9-217ENST00000565832 AIREO43918 545 aa5.6□□□□□ -1.51
CHD9-217ENST00000565832 MRPS14O60783 128 aaKnown RBP5.6□□□□□ -1.51
CHD9-217ENST00000565832 GPX5O75715 221 aa5.6□□□□□ -1.51
CHD9-217ENST00000565832 SLC25A12O75746 678 aa5.6□□□□□ -1.51
CHD9-217ENST00000565832 ALX3O95076 343 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms