RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 TSPEARQ8WU66 669 aa17.33■□□□□ 0.36
CLN6-206ENST00000565471 SLC41A3Q96GZ6 507 aa17.33■□□□□ 0.36
CLN6-206ENST00000565471 ANKRD27Q96NW4 1050 aa17.33■□□□□ 0.36
CLN6-206ENST00000565471 KCNS3Q9BQ31 491 aa17.33■□□□□ 0.36
CLN6-206ENST00000565471 SIKE1Q9BRV8 207 aa17.33■□□□□ 0.36
CLN6-206ENST00000565471 PRR14Q9BWN1 585 aa17.33■□□□□ 0.36
CLN6-206ENST00000565471 TRIM33Q9UPN9 1127 aa17.33■□□□□ 0.36
CLN6-206ENST00000565471 PMF1-BGLAPU3KQ54 211 aa17.33■□□□□ 0.36
CLN6-206ENST00000565471 IGHV4-30-2A0A087WSY4 118 aa17.32■□□□□ 0.36
CLN6-206ENST00000565471 ANGPT2O15123 496 aa17.32■□□□□ 0.36
CLN6-206ENST00000565471 TRAF3IP2O43734 574 aaPredicted RBP17.32■□□□□ 0.36
CLN6-206ENST00000565471 CD5LO43866 347 aa17.32■□□□□ 0.36
CLN6-206ENST00000565471 PCBP3P57721 371 aaKnown RBP17.32■□□□□ 0.36
CLN6-206ENST00000565471 PTOV1Q86YD1 416 aa17.32■□□□□ 0.36
CLN6-206ENST00000565471 GPR137CQ8N3F9 429 aa17.32■□□□□ 0.36
CLN6-206ENST00000565471 SCAIQ8N9R8 606 aa17.32■□□□□ 0.36
CLN6-206ENST00000565471 PIK3C3Q8NEB9 887 aa17.32■□□□□ 0.36
CLN6-206ENST00000565471 CGREF1Q99674 301 aa17.32■□□□□ 0.36
CLN6-206ENST00000565471 A0A096LNT2 108 aa17.31■□□□□ 0.36
CLN6-206ENST00000565471 A0A096LPE4 126 aa17.31■□□□□ 0.36
CLN6-206ENST00000565471 A0A1W2PPZ6 126 aa17.31■□□□□ 0.36
CLN6-206ENST00000565471 TPST2O60704 377 aa17.31■□□□□ 0.36
CLN6-206ENST00000565471 FMO6PO60774 539 aa17.31■□□□□ 0.36
CLN6-206ENST00000565471 IGLV1-44P01699 117 aa17.31■□□□□ 0.36
CLN6-206ENST00000565471 CRYAAP02489 173 aa17.31■□□□□ 0.36
CLN6-206ENST00000565471 BGLAPP02818 100 aa17.31■□□□□ 0.36
CLN6-206ENST00000565471 CSF3P09919 207 aa17.31■□□□□ 0.36
CLN6-206ENST00000565471 EFNA4P52798 201 aa17.31■□□□□ 0.36
CLN6-206ENST00000565471 SWI5Q1ZZU3 235 aa17.31■□□□□ 0.36
CLN6-206ENST00000565471 RETREG3Q86VR2 466 aa17.31■□□□□ 0.36
CLN6-206ENST00000565471 TMEM123Q8N131 208 aa17.31■□□□□ 0.36
CLN6-206ENST00000565471 OR2M2Q96R28 347 aa17.31■□□□□ 0.36
CLN6-206ENST00000565471 WFDC6Q9BQY6 131 aa17.31■□□□□ 0.36
CLN6-206ENST00000565471 TMEM43Q9BTV4 400 aa17.31■□□□□ 0.36
CLN6-206ENST00000565471 GPR35Q9HC97 309 aa17.31■□□□□ 0.36
CLN6-206ENST00000565471 ARGLU1Q9NWB6 273 aaPredicted RBP17.31■□□□□ 0.36
CLN6-206ENST00000565471 ABCA1O95477 2261 aa17.31■□□□□ 0.36
CLN6-206ENST00000565471 ALPK2Q86TB3 2170 aa17.3■□□□□ 0.36
CLN6-206ENST00000565471 JMJD1CQ15652 2540 aa17.3■□□□□ 0.36
CLN6-206ENST00000565471 MS4A18H0YCH9 400 aa17.3■□□□□ 0.36
CLN6-206ENST00000565471 EDF1O60869 148 aaKnown RBP17.3■□□□□ 0.36
CLN6-206ENST00000565471 PDE5AO76074 875 aa17.3■□□□□ 0.36
CLN6-206ENST00000565471 IGKV3-15P01624 115 aa17.3■□□□□ 0.36
CLN6-206ENST00000565471 C8BP07358 591 aa17.3■□□□□ 0.36
CLN6-206ENST00000565471 CECR9P0C854 216 aa17.3■□□□□ 0.36
CLN6-206ENST00000565471 NQO1P15559 274 aaKnown RBP17.3■□□□□ 0.36
CLN6-206ENST00000565471 SLC25A16P16260 332 aa17.3■□□□□ 0.36
CLN6-206ENST00000565471 CDH12P55289 794 aa17.3■□□□□ 0.36
CLN6-206ENST00000565471 ARF1P84077 181 aaKnown RBP17.3■□□□□ 0.36
CLN6-206ENST00000565471 NAAAQ02083 359 aa17.3■□□□□ 0.36
CLN6-206ENST00000565471 CYP51A1Q16850 503 aa17.3■□□□□ 0.36
CLN6-206ENST00000565471 MST1LQ2TV78 715 aa17.3■□□□□ 0.36
CLN6-206ENST00000565471 MS4A18Q3C1V0 323 aa17.3■□□□□ 0.36
CLN6-206ENST00000565471 ZNF613Q6PF04 617 aa17.3■□□□□ 0.36
CLN6-206ENST00000565471 SLC30A8Q8IWU4 369 aa17.3■□□□□ 0.36
CLN6-206ENST00000565471 UEVLDQ8IX04 471 aa17.3■□□□□ 0.36
CLN6-206ENST00000565471 ZNF525Q8N782 197 aa17.3■□□□□ 0.36
CLN6-206ENST00000565471 RNF217Q8TC41 542 aa17.3■□□□□ 0.36
CLN6-206ENST00000565471 THOC1Q96FV9 657 aaKnown RBP17.3■□□□□ 0.36
CLN6-206ENST00000565471 ARHGDIGQ99819 225 aa17.3■□□□□ 0.36
CLN6-206ENST00000565471 ASPNQ9BXN1 380 aa17.3■□□□□ 0.36
CLN6-206ENST00000565471 CHD3Q12873 2000 aaKnown RBP17.3■□□□□ 0.36
CLN6-206ENST00000565471 KIAA1324LA8MWY0 1029 aaPredicted RBP17.29■□□□□ 0.36
CLN6-206ENST00000565471 HPRP00739 348 aa17.29■□□□□ 0.36
CLN6-206ENST00000565471 H2AFXP16104 143 aaPredicted RBP17.29■□□□□ 0.36
CLN6-206ENST00000565471 CBR1P16152 277 aa17.29■□□□□ 0.36
CLN6-206ENST00000565471 CBLP22681 906 aa17.29■□□□□ 0.36
CLN6-206ENST00000565471 MTPNP58546 118 aa17.29■□□□□ 0.36
CLN6-206ENST00000565471 TUBA1BP68363 451 aa17.29■□□□□ 0.36
CLN6-206ENST00000565471 TUBA4AP68366 448 aa17.29■□□□□ 0.36
CLN6-206ENST00000565471 IL1RL1Q01638 556 aa17.29■□□□□ 0.36
CLN6-206ENST00000565471 LOXL1Q08397 574 aaPredicted RBP17.29■□□□□ 0.36
CLN6-206ENST00000565471 SELPLGQ14242 412 aa17.29■□□□□ 0.36
CLN6-206ENST00000565471 CEACAM16Q2WEN9 425 aa17.29■□□□□ 0.36
CLN6-206ENST00000565471 METTL21CQ5VZV1 264 aa17.29■□□□□ 0.36
CLN6-206ENST00000565471 TUBA1AQ71U36 451 aa17.29■□□□□ 0.36
CLN6-206ENST00000565471 CCDC36Q8IYA8 594 aa17.29■□□□□ 0.36
CLN6-206ENST00000565471 SMYD1Q8NB12 490 aa17.29■□□□□ 0.36
CLN6-206ENST00000565471 FAM168AQ92567 244 aa17.29■□□□□ 0.36
CLN6-206ENST00000565471 HTRA1Q92743 480 aa17.29■□□□□ 0.36
CLN6-206ENST00000565471 FBXO17Q96EF6 278 aa17.29■□□□□ 0.36
CLN6-206ENST00000565471 MCHR1Q99705 422 aa17.29■□□□□ 0.36
CLN6-206ENST00000565471 KAT8Q9H7Z6 458 aaKnown RBP17.29■□□□□ 0.36
CLN6-206ENST00000565471 CRLF2Q9HC73 371 aa17.29■□□□□ 0.36
CLN6-206ENST00000565471 NPHS2Q9NP85 383 aa17.29■□□□□ 0.36
CLN6-206ENST00000565471 CA10Q9NS85 328 aa17.29■□□□□ 0.36
CLN6-206ENST00000565471 MRPL39Q9NYK5 338 aaKnown RBP17.29■□□□□ 0.36
CLN6-206ENST00000565471 ADAM21Q9UKJ8 722 aa17.29■□□□□ 0.36
CLN6-206ENST00000565471 ARFGEF3Q5TH69 2177 aa17.28■□□□□ 0.36
CLN6-206ENST00000565471 ZNF99A8MXY4 864 aaPredicted RBP17.28■□□□□ 0.36
CLN6-206ENST00000565471 M0QX08 132 aa17.28■□□□□ 0.36
CLN6-206ENST00000565471 F12P00748 615 aaPredicted RBP17.28■□□□□ 0.36
CLN6-206ENST00000565471 MT-ATP6P00846 226 aa17.28■□□□□ 0.36
CLN6-206ENST00000565471 SERPINF1P36955 418 aa17.28■□□□□ 0.36
CLN6-206ENST00000565471 SNRPD2P62316 118 aaKnown RBP17.28■□□□□ 0.36
CLN6-206ENST00000565471 NFYCQ13952 458 aa17.28■□□□□ 0.36
CLN6-206ENST00000565471 DUSP7Q16829 419 aa17.28■□□□□ 0.36
CLN6-206ENST00000565471 LINC00114Q6XXX2 140 aa17.28■□□□□ 0.36
CLN6-206ENST00000565471 PATL1Q86TB9 770 aaKnown RBP17.28■□□□□ 0.36
CLN6-206ENST00000565471 C20orf196Q8IYI0 205 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms