RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 IGKV1D-42A0A075B6H8 117 aa11.96□□□□□ -0.49
VPS9D1-204ENST00000565023 CPSF4LA6NMK7 179 aaKnown RBP11.96□□□□□ -0.49
VPS9D1-204ENST00000565023 FTCDNL1E5RQL4 147 aa11.96□□□□□ -0.49
VPS9D1-204ENST00000565023 LRRN3E7EW58 273 aa11.96□□□□□ -0.49
VPS9D1-204ENST00000565023 CXCR6O00574 342 aa11.96□□□□□ -0.49
VPS9D1-204ENST00000565023 UPK3AO75631 287 aa11.96□□□□□ -0.49
VPS9D1-204ENST00000565023 SERPINI2O75830 405 aa11.96□□□□□ -0.49
VPS9D1-204ENST00000565023 T-ENOLP0DO92 83 aa11.96□□□□□ -0.49
VPS9D1-204ENST00000565023 NQO1P15559 274 aaKnown RBP11.96□□□□□ -0.49
VPS9D1-204ENST00000565023 ZNF43P17038 809 aa11.96□□□□□ -0.49
VPS9D1-204ENST00000565023 CALB2P22676 271 aa11.96□□□□□ -0.49
VPS9D1-204ENST00000565023 MPGP29372 298 aa11.96□□□□□ -0.49
VPS9D1-204ENST00000565023 FXNQ16595 210 aa11.96□□□□□ -0.49
VPS9D1-204ENST00000565023 HIKESHIQ53FT3 197 aa11.96□□□□□ -0.49
VPS9D1-204ENST00000565023 CYBRD1Q53TN4 286 aa11.96□□□□□ -0.49
VPS9D1-204ENST00000565023 FAM69AQ5T7M9 428 aa11.96□□□□□ -0.49
VPS9D1-204ENST00000565023 OR7E24Q6IFN5 339 aa11.96□□□□□ -0.49
VPS9D1-204ENST00000565023 ULK3Q6PHR2 472 aa11.96□□□□□ -0.49
VPS9D1-204ENST00000565023 SLC22A25Q6T423 547 aa11.96□□□□□ -0.49
VPS9D1-204ENST00000565023 KLHL17Q6TDP4 642 aa11.96□□□□□ -0.49
VPS9D1-204ENST00000565023 KLHL24Q6TFL4 600 aa11.96□□□□□ -0.49
VPS9D1-204ENST00000565023 C16orf89Q6UX73 402 aa11.96□□□□□ -0.49
VPS9D1-204ENST00000565023 TMEM108Q6UXF1 575 aa11.96□□□□□ -0.49
VPS9D1-204ENST00000565023 TRPM8Q7Z2W7 1104 aa11.96□□□□□ -0.49
VPS9D1-204ENST00000565023 RBM45Q8IUH3 476 aaKnown RBP11.96□□□□□ -0.49
VPS9D1-204ENST00000565023 EPHX4Q8IUS5 362 aa11.96□□□□□ -0.49
VPS9D1-204ENST00000565023 CIARTQ8N365 385 aaPredicted RBP11.96□□□□□ -0.49
VPS9D1-204ENST00000565023 POMGNT2Q8NAT1 580 aa11.96□□□□□ -0.49
VPS9D1-204ENST00000565023 OR6T1Q8NGN1 323 aa11.96□□□□□ -0.49
VPS9D1-204ENST00000565023 RADILQ96JH8 1075 aa11.96□□□□□ -0.49
VPS9D1-204ENST00000565023 C18orf12Q96KH6 178 aa11.96□□□□□ -0.49
VPS9D1-204ENST00000565023 MUS81Q96NY9 551 aa11.96□□□□□ -0.49
VPS9D1-204ENST00000565023 PCDHAC1Q9H158 963 aa11.96□□□□□ -0.49
VPS9D1-204ENST00000565023 SLC17A5Q9NRA2 495 aa11.96□□□□□ -0.49
VPS9D1-204ENST00000565023 ADA2Q9NZK5 511 aa11.96□□□□□ -0.49
VPS9D1-204ENST00000565023 MAGED1Q9Y5V3 778 aaPredicted RBP11.96□□□□□ -0.49
VPS9D1-204ENST00000565023 FLNAP21333 2647 aaKnown RBP11.95□□□□□ -0.5
VPS9D1-204ENST00000565023 TRAV36DV7A0A075B6V5 113 aa11.95□□□□□ -0.5
VPS9D1-204ENST00000565023 A0A0B4J2E0 115 aa11.95□□□□□ -0.5
VPS9D1-204ENST00000565023 A0A1B0GX12 115 aa11.95□□□□□ -0.5
VPS9D1-204ENST00000565023 SHISA9B4DS77 424 aa11.95□□□□□ -0.5
VPS9D1-204ENST00000565023 ZNF587BE7ETH6 402 aa11.95□□□□□ -0.5
VPS9D1-204ENST00000565023 PDLIM1O00151 329 aa11.95□□□□□ -0.5
VPS9D1-204ENST00000565023 VAMP5O95183 116 aa11.95□□□□□ -0.5
VPS9D1-204ENST00000565023 INHBBP09529 407 aa11.95□□□□□ -0.5
VPS9D1-204ENST00000565023 HSD17B1P14061 328 aa11.95□□□□□ -0.5
VPS9D1-204ENST00000565023 CDH12P55289 794 aa11.95□□□□□ -0.5
VPS9D1-204ENST00000565023 SELENOWP63302 87 aa11.95□□□□□ -0.5
VPS9D1-204ENST00000565023 TUBA1BP68363 451 aa11.95□□□□□ -0.5
VPS9D1-204ENST00000565023 TUBA4AP68366 448 aa11.95□□□□□ -0.5
VPS9D1-204ENST00000565023 TGFBR3Q03167 851 aa11.95□□□□□ -0.5
VPS9D1-204ENST00000565023 LRRC23Q53EV4 343 aaPredicted RBP11.95□□□□□ -0.5
VPS9D1-204ENST00000565023 SAMD4BQ5PRF9 694 aaKnown RBP11.95□□□□□ -0.5
VPS9D1-204ENST00000565023 SWT1Q5T5J6 900 aaKnown RBP11.95□□□□□ -0.5
VPS9D1-204ENST00000565023 CARD17Q5XLA6 110 aa11.95□□□□□ -0.5
VPS9D1-204ENST00000565023 ZNF613Q6PF04 617 aa11.95□□□□□ -0.5
VPS9D1-204ENST00000565023 TUBA1AQ71U36 451 aa11.95□□□□□ -0.5
VPS9D1-204ENST00000565023 DEFB107AQ8IZN7 70 aa11.95□□□□□ -0.5
VPS9D1-204ENST00000565023 WDR31Q8NA23 367 aa11.95□□□□□ -0.5
VPS9D1-204ENST00000565023 PROX1Q92786 737 aa11.95□□□□□ -0.5
VPS9D1-204ENST00000565023 GSX2Q9BZM3 304 aa11.95□□□□□ -0.5
VPS9D1-204ENST00000565023 CD300AQ9UGN4 299 aa11.95□□□□□ -0.5
VPS9D1-204ENST00000565023 AMDHD2Q9Y303 409 aa11.95□□□□□ -0.5
VPS9D1-204ENST00000565023 SH3GLB1Q9Y371 365 aa11.95□□□□□ -0.5
VPS9D1-204ENST00000565023 ATP23Q9Y6H3 246 aa11.95□□□□□ -0.5
VPS9D1-204ENST00000565023 A0A087WUJ7 227 aa11.94□□□□□ -0.5
VPS9D1-204ENST00000565023 A0A096LPE4 126 aa11.94□□□□□ -0.5
VPS9D1-204ENST00000565023 A0A1W2PPZ6 126 aa11.94□□□□□ -0.5
VPS9D1-204ENST00000565023 B2RBV5 119 aa11.94□□□□□ -0.5
VPS9D1-204ENST00000565023 KPNA4O00629 521 aaPredicted RBP11.94□□□□□ -0.5
VPS9D1-204ENST00000565023 GSTA4O15217 222 aa11.94□□□□□ -0.5
VPS9D1-204ENST00000565023 OR2T1O43869 369 aa11.94□□□□□ -0.5
VPS9D1-204ENST00000565023 DANCRP0C864 163 aa11.94□□□□□ -0.5
VPS9D1-204ENST00000565023 FOSL1P15407 271 aa11.94□□□□□ -0.5
VPS9D1-204ENST00000565023 TNFRSF1BP20333 461 aa11.94□□□□□ -0.5
VPS9D1-204ENST00000565023 CD40P25942 277 aa11.94□□□□□ -0.5
VPS9D1-204ENST00000565023 MXRA7P84157 204 aa11.94□□□□□ -0.5
VPS9D1-204ENST00000565023 LTBQ06643 244 aa11.94□□□□□ -0.5
VPS9D1-204ENST00000565023 PGGHGQ32M88 737 aa11.94□□□□□ -0.5
VPS9D1-204ENST00000565023 SPATS1Q496A3 300 aa11.94□□□□□ -0.5
VPS9D1-204ENST00000565023 ENTPD8Q5MY95 495 aa11.94□□□□□ -0.5
VPS9D1-204ENST00000565023 HMBOX1Q6NT76 420 aa11.94□□□□□ -0.5
VPS9D1-204ENST00000565023 CLEC9AQ6UXN8 241 aa11.94□□□□□ -0.5
VPS9D1-204ENST00000565023 CBLL1Q75N03 491 aa11.94□□□□□ -0.5
VPS9D1-204ENST00000565023 LINGO2Q7L985 606 aa11.94□□□□□ -0.5
VPS9D1-204ENST00000565023 ABHD12BQ7Z5M8 362 aaPredicted RBP11.94□□□□□ -0.5
VPS9D1-204ENST00000565023 CARM1Q86X55 608 aa11.94□□□□□ -0.5
VPS9D1-204ENST00000565023 RNF148Q8N7C7 305 aa11.94□□□□□ -0.5
VPS9D1-204ENST00000565023 RBM15BQ8NDT2 890 aaKnown RBP11.94□□□□□ -0.5
VPS9D1-204ENST00000565023 IGFBPL1Q8WX77 278 aa11.94□□□□□ -0.5
VPS9D1-204ENST00000565023 OXGR1Q96P68 337 aa11.94□□□□□ -0.5
VPS9D1-204ENST00000565023 CDRT15Q96T59 188 aa11.94□□□□□ -0.5
VPS9D1-204ENST00000565023 EPYCQ99645 322 aa11.94□□□□□ -0.5
VPS9D1-204ENST00000565023 EMC6Q9BV81 110 aa11.94□□□□□ -0.5
VPS9D1-204ENST00000565023 ASPNQ9BXN1 380 aa11.94□□□□□ -0.5
VPS9D1-204ENST00000565023 E7EQL1 145 aa11.93□□□□□ -0.5
VPS9D1-204ENST00000565023 NDUFS7O75251 213 aa11.93□□□□□ -0.5
VPS9D1-204ENST00000565023 SLC43A1O75387 559 aa11.93□□□□□ -0.5
VPS9D1-204ENST00000565023 SEC14L2O76054 403 aa11.93□□□□□ -0.5
VPS9D1-204ENST00000565023 LYPD3O95274 346 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms