RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 SCAIQ8N9R8 606 aa9.94□□□□□ -0.82
SF3B3-205ENST00000564899 SETD9Q8NE22 299 aa9.94□□□□□ -0.82
SF3B3-205ENST00000564899 OR4Q3Q8NH05 313 aa9.94□□□□□ -0.82
SF3B3-205ENST00000564899 MOSPD2Q8NHP6 518 aa9.94□□□□□ -0.82
SF3B3-205ENST00000564899 NEIL3Q8TAT5 605 aa9.94□□□□□ -0.82
SF3B3-205ENST00000564899 ABTB1Q969K4 478 aaPredicted RBP9.94□□□□□ -0.82
SF3B3-205ENST00000564899 TAAR6Q96RI8 345 aa9.94□□□□□ -0.82
SF3B3-205ENST00000564899 IFT27Q9BW83 186 aa9.94□□□□□ -0.82
SF3B3-205ENST00000564899 TEX12Q9BXU0 123 aa9.94□□□□□ -0.82
SF3B3-205ENST00000564899 PRRG3Q9BZD7 231 aa9.94□□□□□ -0.82
SF3B3-205ENST00000564899 TSPAN10Q9H1Z9 355 aaPredicted RBP9.94□□□□□ -0.82
SF3B3-205ENST00000564899 IMPAD1Q9NX62 359 aa9.94□□□□□ -0.82
SF3B3-205ENST00000564899 SEC14L4Q9UDX3 406 aa9.94□□□□□ -0.82
SF3B3-205ENST00000564899 TRAPPC4Q9Y296 219 aa9.94□□□□□ -0.82
SF3B3-205ENST00000564899 POLEQ07864 2286 aa9.94□□□□□ -0.82
SF3B3-205ENST00000564899 PCNX3Q9H6A9 2034 aa9.94□□□□□ -0.82
SF3B3-205ENST00000564899 MCIDASD6RGH6 385 aa9.93□□□□□ -0.82
SF3B3-205ENST00000564899 H0YC42 278 aa9.93□□□□□ -0.82
SF3B3-205ENST00000564899 PLPP3O14495 311 aa9.93□□□□□ -0.82
SF3B3-205ENST00000564899 PPP1R3DO95685 299 aa9.93□□□□□ -0.82
SF3B3-205ENST00000564899 ACTL6AO96019 429 aa9.93□□□□□ -0.82
SF3B3-205ENST00000564899 IGHG3P01860 377 aa9.93□□□□□ -0.82
SF3B3-205ENST00000564899 ADORA3P0DMS8 318 aa9.93□□□□□ -0.82
SF3B3-205ENST00000564899 AHCYP23526 432 aa9.93□□□□□ -0.82
SF3B3-205ENST00000564899 GRK5P34947 590 aa9.93□□□□□ -0.82
SF3B3-205ENST00000564899 LHX2P50458 406 aa9.93□□□□□ -0.82
SF3B3-205ENST00000564899 CSNK2A1P68400 391 aaPredicted RBP9.93□□□□□ -0.82
SF3B3-205ENST00000564899 RPL18Q07020 188 aaKnown RBP9.93□□□□□ -0.82
SF3B3-205ENST00000564899 CTU2Q2VPK5 515 aaKnown RBP9.93□□□□□ -0.82
SF3B3-205ENST00000564899 PDSS1Q5T2R2 415 aa9.93□□□□□ -0.82
SF3B3-205ENST00000564899 HBMQ6B0K9 141 aa9.93□□□□□ -0.82
SF3B3-205ENST00000564899 ACSM5Q6NUN0 579 aa9.93□□□□□ -0.82
SF3B3-205ENST00000564899 CASP12Q6UXS9 341 aa9.93□□□□□ -0.82
SF3B3-205ENST00000564899 H1FNTQ75WM6 255 aaPredicted RBP9.93□□□□□ -0.82
SF3B3-205ENST00000564899 THAP5Q7Z6K1 395 aa9.93□□□□□ -0.82
SF3B3-205ENST00000564899 CCDC71Q8IV32 467 aaPredicted RBP9.93□□□□□ -0.82
SF3B3-205ENST00000564899 MARVELD2Q8N4S9 558 aa9.93□□□□□ -0.82
SF3B3-205ENST00000564899 MEIOBQ8N635 442 aa9.93□□□□□ -0.82
SF3B3-205ENST00000564899 LRRC75AQ8NAA5 344 aa9.93□□□□□ -0.82
SF3B3-205ENST00000564899 ADPRHL1Q8NDY3 354 aa9.93□□□□□ -0.82
SF3B3-205ENST00000564899 OR2V1Q8NHB1 315 aa9.93□□□□□ -0.82
SF3B3-205ENST00000564899 PNPLA2Q96AD5 504 aa9.93□□□□□ -0.82
SF3B3-205ENST00000564899 SLC38A2Q96QD8 506 aa9.93□□□□□ -0.82
SF3B3-205ENST00000564899 GPX7Q96SL4 187 aaPredicted RBP9.93□□□□□ -0.82
SF3B3-205ENST00000564899 ENKD1Q9H0I2 346 aa9.93□□□□□ -0.82
SF3B3-205ENST00000564899 CHST11Q9NPF2 352 aa9.93□□□□□ -0.82
SF3B3-205ENST00000564899 TVP23BQ9NYZ1 205 aa9.93□□□□□ -0.82
SF3B3-205ENST00000564899 BAIAP2Q9UQB8 552 aa9.93□□□□□ -0.82
SF3B3-205ENST00000564899 B3GALT5Q9Y2C3 310 aa9.93□□□□□ -0.82
SF3B3-205ENST00000564899 HSPE1-MOB4S4R3N1 261 aa9.93□□□□□ -0.82
SF3B3-205ENST00000564899 NPIPA5E9PKD4 350 aa9.92□□□□□ -0.82
SF3B3-205ENST00000564899 C11orf98E9PRG8 122 aa9.92□□□□□ -0.82
SF3B3-205ENST00000564899 M0R129 80 aa9.92□□□□□ -0.82
SF3B3-205ENST00000564899 BHLHE40O14503 412 aa9.92□□□□□ -0.82
SF3B3-205ENST00000564899 RNF13O43567 381 aa9.92□□□□□ -0.82
SF3B3-205ENST00000564899 DNPH1O43598 174 aa9.92□□□□□ -0.82
SF3B3-205ENST00000564899 EIF1BO60739 113 aaKnown RBP9.92□□□□□ -0.82
SF3B3-205ENST00000564899 SERPINI2O75830 405 aa9.92□□□□□ -0.82
SF3B3-205ENST00000564899 AKR7A3O95154 331 aa9.92□□□□□ -0.82
SF3B3-205ENST00000564899 CRYABP02511 175 aaKnown RBP9.92□□□□□ -0.82
SF3B3-205ENST00000564899 HMGN1P05114 100 aa9.92□□□□□ -0.82
SF3B3-205ENST00000564899 TSPAN19P0C672 248 aa9.92□□□□□ -0.82
SF3B3-205ENST00000564899 EIF1AXP47813 144 aaKnown RBP9.92□□□□□ -0.82
SF3B3-205ENST00000564899 SUCLG1P53597 346 aaKnown RBP9.92□□□□□ -0.82
SF3B3-205ENST00000564899 CLDN18P56856 261 aa9.92□□□□□ -0.82
SF3B3-205ENST00000564899 MYBPC1Q00872 1141 aa9.92□□□□□ -0.82
SF3B3-205ENST00000564899 PUDPQ08623 228 aa9.92□□□□□ -0.82
SF3B3-205ENST00000564899 PDK3Q15120 406 aa9.92□□□□□ -0.82
SF3B3-205ENST00000564899 SNAPC1Q16533 368 aa9.92□□□□□ -0.82
SF3B3-205ENST00000564899 BCL2A1Q16548 175 aa9.92□□□□□ -0.82
SF3B3-205ENST00000564899 ARHGAP11AQ6P4F7 1023 aa9.92□□□□□ -0.82
SF3B3-205ENST00000564899 PAQR6Q6TCH4 344 aa9.92□□□□□ -0.82
SF3B3-205ENST00000564899 DPY19L2P2Q6ZN68 376 aa9.92□□□□□ -0.82
SF3B3-205ENST00000564899 SIAH3Q8IW03 269 aa9.92□□□□□ -0.82
SF3B3-205ENST00000564899 ENTHD1Q8IYW4 607 aa9.92□□□□□ -0.82
SF3B3-205ENST00000564899 LNX2Q8N448 690 aa9.92□□□□□ -0.82
SF3B3-205ENST00000564899 OR10D3Q8NH80 312 aa9.92□□□□□ -0.82
SF3B3-205ENST00000564899 ZHX1-C8orf76Q96EF9 292 aa9.92□□□□□ -0.82
SF3B3-205ENST00000564899 PLEKHA8Q96JA3 519 aa9.92□□□□□ -0.82
SF3B3-205ENST00000564899 ADGRG7Q96K78 797 aa9.92□□□□□ -0.82
SF3B3-205ENST00000564899 KATNB1Q9BVA0 655 aa9.92□□□□□ -0.82
SF3B3-205ENST00000564899 POLDIP3Q9BY77 421 aaKnown RBP9.92□□□□□ -0.82
SF3B3-205ENST00000564899 SRXN1Q9BYN0 137 aa9.92□□□□□ -0.82
SF3B3-205ENST00000564899 INIPQ9NRY2 104 aa9.92□□□□□ -0.82
SF3B3-205ENST00000564899 TAS2R5Q9NYW4 299 aa9.92□□□□□ -0.82
SF3B3-205ENST00000564899 SPRR3Q9UBC9 169 aa9.92□□□□□ -0.82
SF3B3-205ENST00000564899 NPIPA1Q9UND3 350 aa9.92□□□□□ -0.82
SF3B3-205ENST00000564899 RNF6Q9Y252 685 aa9.92□□□□□ -0.82
SF3B3-205ENST00000564899 A0A1B0GVC2 190 aa9.91□□□□□ -0.82
SF3B3-205ENST00000564899 A0A1W2PNV4 684 aa9.91□□□□□ -0.82
SF3B3-205ENST00000564899 AQP7P3A6NL99 342 aa9.91□□□□□ -0.82
SF3B3-205ENST00000564899 AQP7O14520 342 aa9.91□□□□□ -0.82
SF3B3-205ENST00000564899 SURF4O15260 269 aa9.91□□□□□ -0.82
SF3B3-205ENST00000564899 CXCL13O43927 109 aa9.91□□□□□ -0.82
SF3B3-205ENST00000564899 MPZL2O60487 215 aa9.91□□□□□ -0.82
SF3B3-205ENST00000564899 F13BP05160 661 aa9.91□□□□□ -0.82
SF3B3-205ENST00000564899 CD14P08571 375 aa9.91□□□□□ -0.82
SF3B3-205ENST00000564899 ZNF708P17019 499 aa9.91□□□□□ -0.82
SF3B3-205ENST00000564899 NOS3P29474 1203 aa9.91□□□□□ -0.82
SF3B3-205ENST00000564899 PCYT1AP49585 367 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms