RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.15□□□□□ -0.14
RAB40C-208ENST00000564703 PIWIL3Q7Z3Z3 882 aaKnown RBP14.15□□□□□ -0.14
RAB40C-208ENST00000564703 ABHD12BQ7Z5M8 362 aaPredicted RBP14.15□□□□□ -0.14
RAB40C-208ENST00000564703 EPHX4Q8IUS5 362 aa14.15□□□□□ -0.14
RAB40C-208ENST00000564703 NRMQ8IXM6 262 aa14.15□□□□□ -0.14
RAB40C-208ENST00000564703 ZIC4Q8N9L1 334 aa14.15□□□□□ -0.14
RAB40C-208ENST00000564703 POMGNT2Q8NAT1 580 aa14.15□□□□□ -0.14
RAB40C-208ENST00000564703 STEAP2Q8NFT2 490 aa14.15□□□□□ -0.14
RAB40C-208ENST00000564703 LINC01560Q8TB33 94 aa14.15□□□□□ -0.14
RAB40C-208ENST00000564703 FAM222BQ8WU58 562 aa14.15□□□□□ -0.14
RAB40C-208ENST00000564703 MARVELD3Q96A59 401 aa14.15□□□□□ -0.14
RAB40C-208ENST00000564703 USB1Q9BQ65 265 aaKnown RBP14.15□□□□□ -0.14
RAB40C-208ENST00000564703 LRMDAQ9H2I8 198 aa14.15□□□□□ -0.14
RAB40C-208ENST00000564703 MCCC2Q9HCC0 563 aa14.15□□□□□ -0.14
RAB40C-208ENST00000564703 MAN2C1Q9NTJ4 1040 aa14.15□□□□□ -0.14
RAB40C-208ENST00000564703 C20orf141Q9NUB4 165 aa14.15□□□□□ -0.14
RAB40C-208ENST00000564703 ASB6Q9NWX5 421 aa14.15□□□□□ -0.14
RAB40C-208ENST00000564703 KCNN3Q9UGI6 736 aa14.15□□□□□ -0.14
RAB40C-208ENST00000564703 PRSS50Q9UI38 385 aa14.15□□□□□ -0.14
RAB40C-208ENST00000564703 POMPQ9Y244 141 aa14.15□□□□□ -0.14
RAB40C-208ENST00000564703 TMEM5Q9Y2B1 443 aa14.15□□□□□ -0.14
RAB40C-208ENST00000564703 CIB4A0PJX0 185 aa14.14□□□□□ -0.15
RAB40C-208ENST00000564703 EFCAB9A8MZ26 197 aa14.14□□□□□ -0.15
RAB40C-208ENST00000564703 SERPINI2O75830 405 aa14.14□□□□□ -0.15
RAB40C-208ENST00000564703 CIB2O75838 187 aa14.14□□□□□ -0.15
RAB40C-208ENST00000564703 IGHV3-9P01782 118 aa14.14□□□□□ -0.15
RAB40C-208ENST00000564703 ASAH2BP0C7U1 165 aa14.14□□□□□ -0.15
RAB40C-208ENST00000564703 RAP2AP10114 183 aa14.14□□□□□ -0.15
RAB40C-208ENST00000564703 PPP3CBP16298 524 aa14.14□□□□□ -0.15
RAB40C-208ENST00000564703 IGFBP2P18065 325 aa14.14□□□□□ -0.15
RAB40C-208ENST00000564703 IL32P24001 234 aa14.14□□□□□ -0.15
RAB40C-208ENST00000564703 IFNGR2P38484 337 aa14.14□□□□□ -0.15
RAB40C-208ENST00000564703 POU3F1Q03052 451 aaPredicted RBP14.14□□□□□ -0.15
RAB40C-208ENST00000564703 FAPQ12884 760 aa14.14□□□□□ -0.15
RAB40C-208ENST00000564703 SFRP5Q5T4F7 317 aa14.14□□□□□ -0.15
RAB40C-208ENST00000564703 ZNF787Q6DD87 383 aa14.14□□□□□ -0.15
RAB40C-208ENST00000564703 STAC2Q6ZMT1 411 aa14.14□□□□□ -0.15
RAB40C-208ENST00000564703 OAFQ86UD1 273 aa14.14□□□□□ -0.15
RAB40C-208ENST00000564703 CXorf67Q86X51 503 aaPredicted RBP14.14□□□□□ -0.15
RAB40C-208ENST00000564703 GABRG1Q8N1C3 465 aa14.14□□□□□ -0.15
RAB40C-208ENST00000564703 ANKK1Q8NFD2 765 aa14.14□□□□□ -0.15
RAB40C-208ENST00000564703 SLC7A13Q8TCU3 470 aa14.14□□□□□ -0.15
RAB40C-208ENST00000564703 LIPHQ8WWY8 451 aa14.14□□□□□ -0.15
RAB40C-208ENST00000564703 KISS1RQ969F8 398 aaPredicted RBP14.14□□□□□ -0.15
RAB40C-208ENST00000564703 MED18Q9BUE0 208 aa14.14□□□□□ -0.15
RAB40C-208ENST00000564703 SLCO5A1Q9H2Y9 848 aa14.14□□□□□ -0.15
RAB40C-208ENST00000564703 YY1AP1Q9H869 796 aa14.14□□□□□ -0.15
RAB40C-208ENST00000564703 TAS2R5Q9NYW4 299 aa14.14□□□□□ -0.15
RAB40C-208ENST00000564703 SLC7A8Q9UHI5 535 aa14.14□□□□□ -0.15
RAB40C-208ENST00000564703 PKDREJQ9NTG1 2253 aa14.14□□□□□ -0.15
RAB40C-208ENST00000564703 COL12A1Q99715 3063 aa14.13□□□□□ -0.15
RAB40C-208ENST00000564703 A0A1W2PRG6 482 aa14.13□□□□□ -0.15
RAB40C-208ENST00000564703 SH3D21A4FU49 640 aa14.13□□□□□ -0.15
RAB40C-208ENST00000564703 PIP5K1CO60331 668 aa14.13□□□□□ -0.15
RAB40C-208ENST00000564703 SLC43A1O75387 559 aa14.13□□□□□ -0.15
RAB40C-208ENST00000564703 EPXP11678 715 aa14.13□□□□□ -0.15
RAB40C-208ENST00000564703 PSMB1P20618 241 aaKnown RBP14.13□□□□□ -0.15
RAB40C-208ENST00000564703 RRM2P31350 389 aa14.13□□□□□ -0.15
RAB40C-208ENST00000564703 NTF4P34130 210 aa14.13□□□□□ -0.15
RAB40C-208ENST00000564703 TGFBR3Q03167 851 aa14.13□□□□□ -0.15
RAB40C-208ENST00000564703 ANKDD1AQ495B1 522 aa14.13□□□□□ -0.15
RAB40C-208ENST00000564703 IQCCQ4KMZ1 466 aa14.13□□□□□ -0.15
RAB40C-208ENST00000564703 ANKRD34AQ69YU3 496 aa14.13□□□□□ -0.15
RAB40C-208ENST00000564703 SLC46A3Q7Z3Q1 461 aa14.13□□□□□ -0.15
RAB40C-208ENST00000564703 ACBD4Q8NC06 268 aa14.13□□□□□ -0.15
RAB40C-208ENST00000564703 DACH2Q96NX9 599 aa14.13□□□□□ -0.15
RAB40C-208ENST00000564703 ALPK1Q96QP1 1244 aa14.13□□□□□ -0.15
RAB40C-208ENST00000564703 CHID1Q9BWS9 393 aa14.13□□□□□ -0.15
RAB40C-208ENST00000564703 NDEL1Q9GZM8 345 aa14.13□□□□□ -0.15
RAB40C-208ENST00000564703 OR10A4Q9H209 315 aa14.13□□□□□ -0.15
RAB40C-208ENST00000564703 SLC7A10Q9NS82 523 aa14.13□□□□□ -0.15
RAB40C-208ENST00000564703 ZNF226Q9NYT6 803 aa14.13□□□□□ -0.15
RAB40C-208ENST00000564703 B3GAT1Q9P2W7 334 aa14.13□□□□□ -0.15
RAB40C-208ENST00000564703 RCE1Q9Y256 329 aa14.13□□□□□ -0.15
RAB40C-208ENST00000564703 DHRS12A0PJE2 317 aa14.12□□□□□ -0.15
RAB40C-208ENST00000564703 TNFRSF11BO00300 401 aa14.12□□□□□ -0.15
RAB40C-208ENST00000564703 GNGT2O14610 69 aa14.12□□□□□ -0.15
RAB40C-208ENST00000564703 BCL10O95999 233 aa14.12□□□□□ -0.15
RAB40C-208ENST00000564703 HPRP00739 348 aa14.12□□□□□ -0.15
RAB40C-208ENST00000564703 HLA-DOBP13765 273 aa14.12□□□□□ -0.15
RAB40C-208ENST00000564703 FUT4P22083 530 aa14.12□□□□□ -0.15
RAB40C-208ENST00000564703 DNAJA1P31689 397 aaKnown RBP14.12□□□□□ -0.15
RAB40C-208ENST00000564703 SLC9A3P48764 834 aa14.12□□□□□ -0.15
RAB40C-208ENST00000564703 SELENOPP49908 381 aa14.12□□□□□ -0.15
RAB40C-208ENST00000564703 LAPTM4AQ15012 233 aa14.12□□□□□ -0.15
RAB40C-208ENST00000564703 TSPO2Q5TGU0 170 aa14.12□□□□□ -0.15
RAB40C-208ENST00000564703 C1orf146Q5VVC0 180 aa14.12□□□□□ -0.15
RAB40C-208ENST00000564703 TMPRSS11FQ6ZWK6 438 aa14.12□□□□□ -0.15
RAB40C-208ENST00000564703 SLC35D2Q76EJ3 337 aa14.12□□□□□ -0.15
RAB40C-208ENST00000564703 BHLHA15Q7RTS1 189 aaPredicted RBP14.12□□□□□ -0.15
RAB40C-208ENST00000564703 GPR137CQ8N3F9 429 aa14.12□□□□□ -0.15
RAB40C-208ENST00000564703 LINC00471Q8N535 108 aa14.12□□□□□ -0.15
RAB40C-208ENST00000564703 OR4K5Q8NGD3 323 aa14.12□□□□□ -0.15
RAB40C-208ENST00000564703 OR51A7Q8NH64 312 aa14.12□□□□□ -0.15
RAB40C-208ENST00000564703 CANT1Q8WVQ1 401 aa14.12□□□□□ -0.15
RAB40C-208ENST00000564703 DHRS1Q96LJ7 313 aa14.12□□□□□ -0.15
RAB40C-208ENST00000564703 ADAD1Q96M93 576 aaKnown RBP14.12□□□□□ -0.15
RAB40C-208ENST00000564703 WFIKKN1Q96NZ8 548 aa14.12□□□□□ -0.15
RAB40C-208ENST00000564703 B3GAT2Q9NPZ5 323 aa14.12□□□□□ -0.15
RAB40C-208ENST00000564703 INIPQ9NRY2 104 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms